RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 DNAJC25-GNG10A0A024R161 153 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 TBX1O43435 398 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 TGFB1P01137 390 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 SCG5P05408 212 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 PABPC1P11940 636 aaKnown RBP7.19□□□□□ -1.26
RFC4-212ENST00000479307 GFRA1P56159 465 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 SUMO1P63165 101 aaKnown RBP7.19□□□□□ -1.26
RFC4-212ENST00000479307 MAP4K2Q12851 820 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 MSMPQ1L6U9 139 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 NSMFQ6X4W1 530 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 RNF111Q6ZNA4 994 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 STK11IPQ8N1F8 1099 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 KCTD13Q8WZ19 329 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 KISS1RQ969F8 398 aaPredicted RBP7.19□□□□□ -1.26
RFC4-212ENST00000479307 LGR4Q9BXB1 951 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 DUSP13Q9UII6 198 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 VAV3Q9UKW4 847 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 RNF112Q9ULX5 631 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 MINPP1Q9UNW1 487 aa7.19□□□□□ -1.26
RFC4-212ENST00000479307 SSU72P8A0A1W2PR75 194 aa7.18□□□□□ -1.26
RFC4-212ENST00000479307 VAMP4O75379 141 aa7.18□□□□□ -1.26
RFC4-212ENST00000479307 ZNF205O95201 554 aa7.18□□□□□ -1.26
RFC4-212ENST00000479307 GRIA2P42262 883 aa7.18□□□□□ -1.26
RFC4-212ENST00000479307 FOXB2Q5VYV0 432 aa7.18□□□□□ -1.26
RFC4-212ENST00000479307 EXOC2Q96KP1 924 aa7.18□□□□□ -1.26
RFC4-212ENST00000479307 IER2Q9BTL4 223 aa7.18□□□□□ -1.26
RFC4-212ENST00000479307 SLKQ9H2G2 1235 aaPredicted RBP7.18□□□□□ -1.26
RFC4-212ENST00000479307 SEMA6BQ9H3T3 888 aa7.18□□□□□ -1.26
RFC4-212ENST00000479307 BSDC1Q9NW68 430 aaPredicted RBP7.18□□□□□ -1.26
RFC4-212ENST00000479307 TCFL5Q9UL49 500 aa7.18□□□□□ -1.26
RFC4-212ENST00000479307 GPR55Q9Y2T6 319 aaPredicted RBP7.18□□□□□ -1.26
RFC4-212ENST00000479307 MRPS23Q9Y3D9 190 aaKnown RBP7.18□□□□□ -1.26
RFC4-212ENST00000479307 BACE2Q9Y5Z0 518 aa7.18□□□□□ -1.26
RFC4-212ENST00000479307 KIF21BO75037 1637 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 KRTAP9-6A0A140TA67 174 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 RBAK-RBAKDNI3L0D1 243 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 AURKAO14965 403 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 PRODHO43272 600 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 CD3EP07766 207 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 SNRPB2P08579 225 aaKnown RBP7.17□□□□□ -1.26
RFC4-212ENST00000479307 VAV1P15498 845 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 LTKP29376 864 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 YOD1Q5VVQ6 348 aaPredicted RBP7.17□□□□□ -1.26
RFC4-212ENST00000479307 USHBP1Q8N6Y0 703 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 COPS5Q92905 334 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 OSBP2Q969R2 916 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 FHAD1B1AJZ9 1412 aa7.17□□□□□ -1.26
RFC4-212ENST00000479307 ADAMTSL3P82987 1691 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 DLX3O60479 287 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 COBLO75128 1261 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 ASMTLO95671 621 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 SYPP08247 313 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 HOXA10P31260 410 aaPredicted RBP7.16□□□□□ -1.26
RFC4-212ENST00000479307 L1CAMP32004 1257 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 AOC3Q16853 763 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 DPY19L1Q2PZI1 675 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 FAM209AQ5JX71 171 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 EEF1DP3Q658K8 133 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 RCSD1Q6JBY9 416 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 FCRL3Q96P31 734 aaPredicted RBP7.16□□□□□ -1.26
RFC4-212ENST00000479307 SLC12A9Q9BXP2 914 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 MRPL4Q9BYD3 311 aaKnown RBP7.16□□□□□ -1.26
RFC4-212ENST00000479307 NCOA5Q9HCD5 579 aaKnown RBP7.16□□□□□ -1.26
RFC4-212ENST00000479307 ATP13A1Q9HD20 1204 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 PLAAQ9Y263 795 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 PTPRMP28827 1452 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 TEX14Q8IWB6 1497 aa7.16□□□□□ -1.26
RFC4-212ENST00000479307 C2orf71A6NGG8 1288 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 STXBP3O00186 592 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 PLD2O14939 933 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 ESR1P03372 595 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 NCLP19338 710 aaKnown RBP7.15□□□□□ -1.26
RFC4-212ENST00000479307 KCNJ6P48051 423 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 SEPHS1P49903 392 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 RBM10P98175 930 aaKnown RBP7.15□□□□□ -1.26
RFC4-212ENST00000479307 SCRN1Q12765 414 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 FNDC3BQ53EP0 1204 aaKnown RBP7.15□□□□□ -1.26
RFC4-212ENST00000479307 SLC35F1Q5T1Q4 408 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 CREG2Q8IUH2 290 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 MCMBPQ9BTE3 642 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 FOXP3Q9BZS1 431 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 PRKAB1Q9Y478 270 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 PCDHA11Q9Y5I1 949 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 SBNO2Q9Y2G9 1366 aa7.15□□□□□ -1.26
RFC4-212ENST00000479307 TRBV23OR9-2A0A075B6M9 112 aa7.14□□□□□ -1.27
RFC4-212ENST00000479307 WASH4PA8MWX3 477 aa7.14□□□□□ -1.27
RFC4-212ENST00000479307 RFPL3O75679 317 aa7.14□□□□□ -1.27
RFC4-212ENST00000479307 PRNPP04156 253 aa7.14□□□□□ -1.27
RFC4-212ENST00000479307 IFNGR1P15260 489 aa7.14□□□□□ -1.27
RFC4-212ENST00000479307 EGR3Q06889 387 aa7.14□□□□□ -1.27
RFC4-212ENST00000479307 ACBD5Q5T8D3 534 aaPredicted RBP7.14□□□□□ -1.27
RFC4-212ENST00000479307 PLB1Q6P1J6 1458 aa7.14□□□□□ -1.27
RFC4-212ENST00000479307 KSR1Q8IVT5 923 aa7.14□□□□□ -1.27
RFC4-212ENST00000479307 TMEM145Q8NBT3 493 aa7.14□□□□□ -1.27
RFC4-212ENST00000479307 SYTL4Q96C24 671 aaPredicted RBP7.14□□□□□ -1.27
RFC4-212ENST00000479307 C1orf159Q96HA4 380 aa7.14□□□□□ -1.27
RFC4-212ENST00000479307 LMCD1Q9NZU5 365 aa7.14□□□□□ -1.27
RFC4-212ENST00000479307 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.14□□□□□ -1.27
RFC4-212ENST00000479307 CUL7Q14999 1698 aa7.13□□□□□ -1.27
RFC4-212ENST00000479307 ERICH3Q5RHP9 1530 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms