RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 FNBP4Q8N3X1 1017 aaPredicted RBP12.14□□□□□ -0.47
VPS52-217ENST00000478934 MB21D1Q8N884 522 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 CCDC148Q8NFR7 591 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 NEDD1Q8NHV4 660 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 PNKPQ96T60 521 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 DDX4Q9NQI0 724 aaKnown RBP12.14□□□□□ -0.47
VPS52-217ENST00000478934 AGPAT5Q9NUQ2 364 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 RMND1Q9NWS8 449 aa12.14□□□□□ -0.47
VPS52-217ENST00000478934 COL24A1Q17RW2 1714 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 RASSF10A6NK89 507 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 KIF5CO60282 957 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 TDP2O95551 362 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 OR52Z1P0C646 297 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 AKR1B1P15121 316 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 PDE4DQ08499 809 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 TTI2Q6NXR4 508 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 DAGLBQ8NCG7 672 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 GOLGA1Q92805 767 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 SLC37A4O43826 429 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 SLC16A2P36021 539 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 SCNN1DP51172 638 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 ASIC1P78348 528 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 DDR1Q08345 913 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 NONOQ15233 471 aaKnown RBP eCLIP12.13□□□□□ -0.47
VPS52-217ENST00000478934 NCAPH2Q6IBW4 605 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 TTBK2Q6IQ55 1244 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 WDR59Q6PJI9 974 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 GPR161Q8N6U8 529 aaKnown RBP12.13□□□□□ -0.47
VPS52-217ENST00000478934 GIMAP8Q8ND71 665 aaPredicted RBP12.13□□□□□ -0.47
VPS52-217ENST00000478934 GLIS3Q8NEA6 775 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 RRP36Q96EU6 259 aaKnown RBP12.13□□□□□ -0.47
VPS52-217ENST00000478934 TRIM9Q9C026 710 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 SLC39A2Q9NP94 309 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 HDAC6Q9UBN7 1215 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 GUCA1BQ9UMX6 200 aa12.13□□□□□ -0.47
VPS52-217ENST00000478934 ITIH6Q6UXX5 1313 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 H7C1D1 291 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 IL1R1P14778 569 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 MCM6Q14566 821 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 UBE2SQ16763 222 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 DPP8Q6V1X1 898 aaPredicted RBP12.12□□□□□ -0.47
VPS52-217ENST00000478934 DYMQ7RTS9 669 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 CSGALNACT2Q8N6G5 542 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 ZNF507Q8TCN5 953 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 HINFPQ9BQA5 517 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 NAA15Q9BXJ9 866 aaKnown RBP12.12□□□□□ -0.47
VPS52-217ENST00000478934 CCSER1Q9C0I3 900 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 ANKZF1Q9H8Y5 726 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 ARFGAP3Q9NP61 516 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 DAGLAQ9Y4D2 1042 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 SRCAPQ6ZRS2 3230 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 POTEMA6NI47 508 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 RGL2O15211 777 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 RHOBTB3O94955 611 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 ATP2B2Q01814 1243 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 SMC1AQ14683 1233 aaKnown RBP12.12□□□□□ -0.47
VPS52-217ENST00000478934 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 NEK8Q86SG6 692 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 CERS5Q8N5B7 392 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 SPZ1Q9BXG8 430 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 PCDHAC2Q9Y5I4 1007 aa12.12□□□□□ -0.47
VPS52-217ENST00000478934 FAM196BA6NMK8 535 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 TPM1P09493 284 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 PDHBP11177 359 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 CRY2Q49AN0 593 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 CYP26C1Q6V0L0 522 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 TMTC1Q8IUR5 882 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 KIAA0895Q8NCT3 520 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 FUT8Q9BYC5 575 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 C6orf50Q9HD87 102 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 KCNQ5Q9NR82 932 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 SEC63Q9UGP8 760 aaKnown RBP12.11□□□□□ -0.47
VPS52-217ENST00000478934 EPN1Q9Y6I3 576 aaPredicted RBP12.11□□□□□ -0.47
VPS52-217ENST00000478934 DDX60LQ5H9U9 1706 aaKnown RBP12.11□□□□□ -0.47
VPS52-217ENST00000478934 RCCD1A6NED2 376 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 LGALS16A8MUM7 142 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 H3BQF6 201 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 RAD21O60216 631 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 PPP1R11O60927 126 aaPredicted RBP12.11□□□□□ -0.47
VPS52-217ENST00000478934 SRGAP2O75044 1071 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 FECHP22830 423 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 SPAG1Q07617 926 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 SOGA3Q5TF21 947 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 KCNK18Q7Z418 384 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 SRGAP1Q7Z6B7 1085 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 ANKRD20A12PQ8NF67 263 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 PYM1Q9BRP8 204 aaKnown RBP12.11□□□□□ -0.47
VPS52-217ENST00000478934 TUBGCP2Q9BSJ2 902 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 DUSP10Q9Y6W6 482 aa12.11□□□□□ -0.47
VPS52-217ENST00000478934 PSMA7O14818 248 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 N4BP1O75113 896 aaKnown RBP12.1□□□□□ -0.47
VPS52-217ENST00000478934 NDUFA10O95299 355 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 ATP2B4P23634 1241 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 CACNB3P54284 484 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 HERVK_113P62684 666 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 GRB10Q13322 594 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 KCNB1Q14721 858 aa12.1□□□□□ -0.47
VPS52-217ENST00000478934 LRRC41Q15345 812 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms