RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 KCTD3Q9Y597 815 aa7.54□□□□□ -1.2
VPS50-213ENST00000477572 SLC12A7Q9Y666 1083 aa7.54□□□□□ -1.2
VPS50-213ENST00000477572 PI3P19957 117 aa7.53□□□□□ -1.2
VPS50-213ENST00000477572 NCKAP1LP55160 1127 aa7.53□□□□□ -1.2
VPS50-213ENST00000477572 YBX1P67809 324 aaKnown RBP7.53□□□□□ -1.2
VPS50-213ENST00000477572 LAPTM5Q13571 262 aa7.53□□□□□ -1.2
VPS50-213ENST00000477572 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
VPS50-213ENST00000477572 KIAA1211LQ6NV74 962 aa7.53□□□□□ -1.2
VPS50-213ENST00000477572 C19orf47Q8N9M1 422 aaKnown RBP7.53□□□□□ -1.2
VPS50-213ENST00000477572 OR6P1Q8NGX9 317 aa7.53□□□□□ -1.2
VPS50-213ENST00000477572 PTCHD1Q96NR3 888 aa7.53□□□□□ -1.2
VPS50-213ENST00000477572 GBP3Q9H0R5 595 aa7.53□□□□□ -1.2
VPS50-213ENST00000477572 TNFRSF12AQ9NP84 129 aa7.53□□□□□ -1.2
VPS50-213ENST00000477572 DIS3Q9Y2L1 958 aaKnown RBP7.53□□□□□ -1.2
VPS50-213ENST00000477572 A0A1W2PQJ5 194 aa7.52□□□□□ -1.21
VPS50-213ENST00000477572 CDR1P51861 262 aa7.52□□□□□ -1.21
VPS50-213ENST00000477572 SEC16BQ96JE7 1060 aa7.52□□□□□ -1.21
VPS50-213ENST00000477572 SUGT1Q9Y2Z0 365 aa7.52□□□□□ -1.21
VPS50-213ENST00000477572 HCFC2Q9Y5Z7 792 aa7.52□□□□□ -1.21
VPS50-213ENST00000477572 MRVI1Q9Y6F6 885 aa7.52□□□□□ -1.21
VPS50-213ENST00000477572 A0A087WZG4 1122 aa7.51□□□□□ -1.21
VPS50-213ENST00000477572 PPM1BO75688 479 aa7.51□□□□□ -1.21
VPS50-213ENST00000477572 BICRALQ6AI39 1079 aa7.51□□□□□ -1.21
VPS50-213ENST00000477572 VHLLQ6RSH7 139 aa7.51□□□□□ -1.21
VPS50-213ENST00000477572 RPTNQ6XPR3 784 aa7.51□□□□□ -1.21
VPS50-213ENST00000477572 SIAH1Q8IUQ4 282 aa7.51□□□□□ -1.21
VPS50-213ENST00000477572 CGGBP1Q9UFW8 167 aaPredicted RBP7.51□□□□□ -1.21
VPS50-213ENST00000477572 SUSD2Q9UGT4 822 aa7.51□□□□□ -1.21
VPS50-213ENST00000477572 IRAK3Q9Y616 596 aa7.51□□□□□ -1.21
VPS50-213ENST00000477572 ERCC5P28715 1186 aaPredicted RBP7.5□□□□□ -1.21
VPS50-213ENST00000477572 CYP2R1Q6VVX0 501 aa7.5□□□□□ -1.21
VPS50-213ENST00000477572 MZB1Q8WU39 189 aa7.5□□□□□ -1.21
VPS50-213ENST00000477572 SIGLEC10Q96LC7 697 aa7.5□□□□□ -1.21
VPS50-213ENST00000477572 LGR4Q9BXB1 951 aa7.5□□□□□ -1.21
VPS50-213ENST00000477572 RXFP1Q9HBX9 757 aa7.5□□□□□ -1.21
VPS50-213ENST00000477572 APEX2Q9UBZ4 518 aa7.5□□□□□ -1.21
VPS50-213ENST00000477572 HRKO00198 91 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 ABLIM1O14639 778 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 AURKAO14965 403 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 N4BP3O15049 544 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 TBC1D8O95759 1140 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 CASP7P55210 303 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 ZNF385BQ569K4 471 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 LCE1DQ5T752 114 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 OLFML2BQ68BL8 750 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 AMIGO3Q86WK7 504 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 LDHDQ86WU2 507 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 CPNE8Q86YQ8 564 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 PPP1R14AQ96A00 147 aa7.49□□□□□ -1.21
VPS50-213ENST00000477572 BMP7P18075 431 aa7.48□□□□□ -1.21
VPS50-213ENST00000477572 ATF4P18848 351 aaPredicted RBP7.48□□□□□ -1.21
VPS50-213ENST00000477572 SEPHS1P49903 392 aa7.48□□□□□ -1.21
VPS50-213ENST00000477572 AMPD2Q01433 879 aa7.48□□□□□ -1.21
VPS50-213ENST00000477572 VMACQ2NL98 169 aa7.48□□□□□ -1.21
VPS50-213ENST00000477572 PLEKHN1Q494U1 663 aaPredicted RBP7.48□□□□□ -1.21
VPS50-213ENST00000477572 ARHGEF39Q8N4T4 335 aa7.48□□□□□ -1.21
VPS50-213ENST00000477572 CAPN10Q9HC96 672 aa7.48□□□□□ -1.21
VPS50-213ENST00000477572 PDLIM7Q9NR12 457 aa7.48□□□□□ -1.21
VPS50-213ENST00000477572 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
VPS50-213ENST00000477572 C2orf71A6NGG8 1288 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 RFXAPO00287 272 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 SMAD7O15105 426 aaKnown RBP7.47□□□□□ -1.21
VPS50-213ENST00000477572 KCNH1O95259 989 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 DBHP09172 617 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 INHBBP09529 407 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 L1CAMP32004 1257 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 ZNF200P98182 395 aaPredicted RBP7.47□□□□□ -1.21
VPS50-213ENST00000477572 EEF1DP3Q658K8 133 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 RCSD1Q6JBY9 416 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 IGDCC3Q8IVU1 814 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 EPB41L4AQ9HCS5 686 aaPredicted RBP7.47□□□□□ -1.21
VPS50-213ENST00000477572 AKT3Q9Y243 479 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 RWDD3Q9Y3V2 267 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 CCDC9Q9Y3X0 531 aaKnown RBP7.47□□□□□ -1.21
VPS50-213ENST00000477572 BACE2Q9Y5Z0 518 aa7.47□□□□□ -1.21
VPS50-213ENST00000477572 ZC3H12DA2A288 527 aaKnown RBP7.46□□□□□ -1.22
VPS50-213ENST00000477572 ANKRD34BA5PLL1 514 aa7.46□□□□□ -1.22
VPS50-213ENST00000477572 F8W031 263 aaPredicted RBP7.46□□□□□ -1.22
VPS50-213ENST00000477572 TMEM62Q0P6H9 643 aa7.46□□□□□ -1.22
VPS50-213ENST00000477572 CBX2Q14781 532 aaPredicted RBP7.46□□□□□ -1.22
VPS50-213ENST00000477572 TCERG1LQ5VWI1 586 aa7.46□□□□□ -1.22
VPS50-213ENST00000477572 ZC3H14Q6PJT7 736 aaKnown RBP7.46□□□□□ -1.22
VPS50-213ENST00000477572 ZNF513Q8N8E2 541 aaPredicted RBP7.46□□□□□ -1.22
VPS50-213ENST00000477572 BCAS3Q9H6U6 928 aa7.46□□□□□ -1.22
VPS50-213ENST00000477572 FBLN5Q9UBX5 448 aa7.46□□□□□ -1.22
VPS50-213ENST00000477572 STRIP2Q9ULQ0 834 aa7.46□□□□□ -1.22
VPS50-213ENST00000477572 SSBP05455 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
VPS50-213ENST00000477572 MAPKAPK2P49137 400 aa7.45□□□□□ -1.22
VPS50-213ENST00000477572 NR1I3Q14994 352 aa7.45□□□□□ -1.22
VPS50-213ENST00000477572 LARP1BQ659C4 914 aaKnown RBP7.45□□□□□ -1.22
VPS50-213ENST00000477572 TMEFF1Q8IYR6 380 aa7.45□□□□□ -1.22
VPS50-213ENST00000477572 RCC1LQ96I51 464 aaKnown RBP7.45□□□□□ -1.22
VPS50-213ENST00000477572 APBA2Q99767 749 aa7.45□□□□□ -1.22
VPS50-213ENST00000477572 GULP1Q9UBP9 304 aa7.45□□□□□ -1.22
VPS50-213ENST00000477572 DBR1Q9UK59 544 aaKnown RBP7.45□□□□□ -1.22
VPS50-213ENST00000477572 PCDHA5Q9Y5H7 936 aa7.45□□□□□ -1.22
VPS50-213ENST00000477572 B2RBV5 119 aa7.44□□□□□ -1.22
VPS50-213ENST00000477572 IRS4O14654 1257 aaPredicted RBP7.44□□□□□ -1.22
VPS50-213ENST00000477572 BUB1BO60566 1050 aaPredicted RBP7.44□□□□□ -1.22
VPS50-213ENST00000477572 PPP1R11O60927 126 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms