RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 CLRN2A0PK11 232 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 GOLGA5Q8TBA6 731 aa20.34■□□□□ 0.85
VARS2-209ENST00000477288 CNKSR1Q969H4 720 aa20.34■□□□□ 0.85
VARS2-209ENST00000477288 HAUS1Q96CS2 278 aa20.34■□□□□ 0.85
VARS2-209ENST00000477288 TLR3O15455 904 aaKnown RBP20.34■□□□□ 0.85
VARS2-209ENST00000477288 KCTD2Q14681 263 aa20.34■□□□□ 0.85
VARS2-209ENST00000477288 NEK8Q86SG6 692 aa20.34■□□□□ 0.85
VARS2-209ENST00000477288 MORC3Q14149 939 aa20.34■□□□□ 0.85
VARS2-209ENST00000477288 GRK7Q8WTQ7 553 aa20.34■□□□□ 0.85
VARS2-209ENST00000477288 BAG5Q9UL15 447 aa20.34■□□□□ 0.85
VARS2-209ENST00000477288 N4BP1O75113 896 aaKnown RBP20.34■□□□□ 0.85
VARS2-209ENST00000477288 RASSF2P50749 326 aa20.33■□□□□ 0.85
VARS2-209ENST00000477288 CHRNDQ07001 517 aa20.33■□□□□ 0.85
VARS2-209ENST00000477288 Q3C1V9 767 aa20.33■□□□□ 0.85
VARS2-209ENST00000477288 PPM1KQ8N3J5 372 aa20.33■□□□□ 0.85
VARS2-209ENST00000477288 OR52Z1P0C646 297 aa20.33■□□□□ 0.85
VARS2-209ENST00000477288 CCDC93Q567U6 631 aa20.33■□□□□ 0.85
VARS2-209ENST00000477288 USPL1Q5W0Q7 1092 aa20.33■□□□□ 0.85
VARS2-209ENST00000477288 TRIM68Q6AZZ1 485 aa20.33■□□□□ 0.85
VARS2-209ENST00000477288 NUB1Q9Y5A7 615 aa20.33■□□□□ 0.85
VARS2-209ENST00000477288 RTEL1Q9NZ71 1219 aa20.33■□□□□ 0.84
VARS2-209ENST00000477288 ARMCX3Q9UH62 379 aaPredicted RBP20.33■□□□□ 0.84
VARS2-209ENST00000477288 SEPT9Q9UHD8 586 aaPredicted RBP20.33■□□□□ 0.84
VARS2-209ENST00000477288 SAR1BQ9Y6B6 198 aa20.33■□□□□ 0.84
VARS2-209ENST00000477288 PFDN6O15212 129 aa20.33■□□□□ 0.84
VARS2-209ENST00000477288 SMYD2Q9NRG4 433 aa20.33■□□□□ 0.84
VARS2-209ENST00000477288 DISC1Q9NRI5 854 aa20.33■□□□□ 0.84
VARS2-209ENST00000477288 AKT3Q9Y243 479 aa20.33■□□□□ 0.84
VARS2-209ENST00000477288 TNKSO95271 1327 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 OPHN1O60890 802 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 STMN1P16949 149 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 TTLL7Q6ZT98 887 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 PDZD8Q8NEN9 1154 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 MAD1L1Q9Y6D9 718 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 GBP5Q96PP8 586 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 KIF9Q9HAQ2 790 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 PPEF1O14829 653 aaPredicted RBP20.32■□□□□ 0.84
VARS2-209ENST00000477288 DBN1Q16643 649 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 PARD3BQ8TEW8 1205 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 LRFN2Q9ULH4 789 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 ECE1P42892 770 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 KRT26Q7Z3Y9 468 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 NOSTRINQ8IVI9 506 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 KLHL14Q9P2G3 628 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 SPICE1Q8N0Z3 855 aa20.32■□□□□ 0.84
VARS2-209ENST00000477288 ZBTB38Q8NAP3 1195 aaPredicted RBP20.32■□□□□ 0.84
VARS2-209ENST00000477288 THAP12O43422 761 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 PDE6AP16499 860 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 XPAP23025 273 aaPredicted RBP20.31■□□□□ 0.84
VARS2-209ENST00000477288 CYP4A11Q02928 519 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 TFDP1Q14186 410 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 MAP3K21Q5TCX8 1036 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 FANCBQ8NB91 859 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 PPFIA4O75335 1185 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 PFKFB1P16118 471 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 SESN3P58005 492 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 UBXN2AP68543 259 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 IQCDQ96DY2 449 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 MMEL1Q495T6 779 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 SCG2P13521 617 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 INPP1P49441 399 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 RYBPQ8N488 228 aaPredicted RBP20.31■□□□□ 0.84
VARS2-209ENST00000477288 MCUQ8NE86 351 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 HAUS8Q9BT25 410 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 XPO4Q9C0E2 1151 aaKnown RBP20.31■□□□□ 0.84
VARS2-209ENST00000477288 MIS12Q9H081 205 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 AP5M1Q9H0R1 490 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 S100BP04271 92 aaPredicted RBP20.31■□□□□ 0.84
VARS2-209ENST00000477288 OSBPP22059 807 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 COG7P83436 770 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 SLC39A2Q9NP94 309 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 MAGI3Q5TCQ9 1506 aa20.31■□□□□ 0.84
VARS2-209ENST00000477288 MYSM1Q5VVJ2 828 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 COL4A3BPQ9Y5P4 624 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 USH1CQ9Y6N9 552 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 POLR2FP61218 127 aaKnown RBP20.3■□□□□ 0.84
VARS2-209ENST00000477288 ARHGEF6Q15052 776 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 TTBK2Q6IQ55 1244 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 PRKAG2Q9UGJ0 569 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 KCNQ3O43525 872 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 CCNA1P78396 465 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 ARHGAP4P98171 946 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 ME3Q16798 604 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 UBE2Q2Q8WVN8 375 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 SPDL1Q96EA4 605 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 A6NJR5 290 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 SPECC1L-ADORA2AF8WAN1 911 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 GNGT1P63211 74 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 DESI2Q9BSY9 194 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 ZMYM6O95789 1325 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 INSRP06213 1382 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 SPDYE2BA6NHP3 402 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 SPDYE6P0CI01 402 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 PHKG2P15735 406 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 ANAPC5Q9UJX4 755 aa20.3■□□□□ 0.84
VARS2-209ENST00000477288 ATP1A2P50993 1020 aa20.29■□□□□ 0.84
VARS2-209ENST00000477288 BFSP1Q12934 665 aa20.29■□□□□ 0.84
VARS2-209ENST00000477288 H7C0C1 242 aa20.29■□□□□ 0.84
VARS2-209ENST00000477288 ATP5OP48047 213 aa20.29■□□□□ 0.84
VARS2-209ENST00000477288 LARSQ9P2J5 1176 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms