RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 TRAF1Q13077 416 aa32.92■■■□□ 2.86
VEGFA-211ENST00000476772 AXDND1Q5T1B0 1012 aaPredicted RBP32.92■■■□□ 2.86
VEGFA-211ENST00000476772 CCAR1Q8IX12 1150 aaKnown RBP32.92■■■□□ 2.86
VEGFA-211ENST00000476772 MRVI1Q9Y6F6 885 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 RLFQ13129 1914 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 A0A1W2PQ27 194 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 A0A1W2PQ64 194 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 A0A1W2PQD8 194 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 USP17L15C9J2P7 530 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 USP17L13C9JLJ4 530 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 USP17L11C9JVI0 530 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 USP17L18D6R9N7 530 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 USP17L22D6RA61 530 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 USP17L17D6RBQ6 530 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 USP17L19D6RCP7 530 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 USP17L20D6RJB6 530 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 OPLAHO14841 1288 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 USP17L24Q0WX57 530 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 LDLRAD1Q5T700 205 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 USP17L6PQ6QN14 398 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 TBCKQ8TEA7 893 aa32.91■■■□□ 2.86
VEGFA-211ENST00000476772 ZNF536O15090 1300 aa32.9■■■□□ 2.86
VEGFA-211ENST00000476772 IRF6O14896 467 aa32.9■■■□□ 2.86
VEGFA-211ENST00000476772 BMP15O95972 392 aa32.9■■■□□ 2.86
VEGFA-211ENST00000476772 MCM7P33993 719 aa32.9■■■□□ 2.86
VEGFA-211ENST00000476772 GOLPH3LQ9H4A5 285 aa32.9■■■□□ 2.86
VEGFA-211ENST00000476772 SLC38A10Q9HBR0 1119 aa32.9■■■□□ 2.86
VEGFA-211ENST00000476772 ICAM1P05362 532 aa32.89■■■□□ 2.86
VEGFA-211ENST00000476772 KRI1Q8N9T8 703 aaKnown RBP32.89■■■□□ 2.86
VEGFA-211ENST00000476772 FSIP1Q8NA03 581 aa32.89■■■□□ 2.86
VEGFA-211ENST00000476772 FBXO2Q9UK22 296 aaPredicted RBP32.89■■■□□ 2.86
VEGFA-211ENST00000476772 MORC2Q9Y6X9 1032 aaPredicted RBP32.89■■■□□ 2.86
VEGFA-211ENST00000476772 MEIS2O14770 477 aa32.88■■■□□ 2.85
VEGFA-211ENST00000476772 MRPS27Q92552 414 aaKnown RBP32.88■■■□□ 2.85
VEGFA-211ENST00000476772 SYAP1Q96A49 352 aaPredicted RBP32.88■■■□□ 2.85
VEGFA-211ENST00000476772 ATG4CQ96DT6 458 aa32.88■■■□□ 2.85
VEGFA-211ENST00000476772 CLIC6Q96NY7 704 aa32.88■■■□□ 2.85
VEGFA-211ENST00000476772 LOC285556D6RIA3 1793 aa32.88■■■□□ 2.85
VEGFA-211ENST00000476772 CUTAO60888 179 aa32.88■■■□□ 2.85
VEGFA-211ENST00000476772 PTPREP23469 700 aa32.88■■■□□ 2.85
VEGFA-211ENST00000476772 CATSPERGQ6ZRH7 1159 aa32.88■■■□□ 2.85
VEGFA-211ENST00000476772 NEK8Q86SG6 692 aa32.88■■■□□ 2.85
VEGFA-211ENST00000476772 OPTNQ96CV9 577 aa32.88■■■□□ 2.85
VEGFA-211ENST00000476772 AGBL1Q96MI9 1066 aa32.88■■■□□ 2.85
VEGFA-211ENST00000476772 CCPG1Q9ULG6 757 aa32.88■■■□□ 2.85
VEGFA-211ENST00000476772 ABCB11O95342 1321 aa32.87■■■□□ 2.85
VEGFA-211ENST00000476772 ATP2C1P98194 919 aaPredicted RBP32.87■■■□□ 2.85
VEGFA-211ENST00000476772 PTGDRQ13258 359 aa32.87■■■□□ 2.85
VEGFA-211ENST00000476772 PPIL2Q13356 520 aa32.87■■■□□ 2.85
VEGFA-211ENST00000476772 A0A0G2JLL6 359 aaPredicted RBP32.86■■■□□ 2.85
VEGFA-211ENST00000476772 NR1I2O75469 434 aa32.86■■■□□ 2.85
VEGFA-211ENST00000476772 LETM2Q2VYF4 491 aa32.86■■■□□ 2.85
VEGFA-211ENST00000476772 ZSCAN23Q3MJ62 389 aa32.86■■■□□ 2.85
VEGFA-211ENST00000476772 PRRT2Q7Z6L0 340 aaPredicted RBP32.86■■■□□ 2.85
VEGFA-211ENST00000476772 WNK4Q96J92 1243 aa32.86■■■□□ 2.85
VEGFA-211ENST00000476772 DACT1Q9NYF0 836 aa32.86■■■□□ 2.85
VEGFA-211ENST00000476772 MRPL11Q9Y3B7 192 aaKnown RBP32.86■■■□□ 2.85
VEGFA-211ENST00000476772 VWA5AO00534 786 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 ZBED4O75132 1171 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 GRIN1Q05586 938 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 CPXCR1Q8N123 301 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 RAVER2Q9HCJ3 691 aaKnown RBP32.85■■■□□ 2.85
VEGFA-211ENST00000476772 KCNH4Q9UQ05 1017 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 SRPRBQ9Y5M8 271 aaKnown RBP32.85■■■□□ 2.85
VEGFA-211ENST00000476772 CXCL11O14625 94 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 FDX1P10109 184 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 DSG3P32926 999 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 COG2Q14746 738 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 TREML2Q5T2D2 321 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 CCDC183Q5T5S1 534 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 SHC4Q6S5L8 630 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 CCDC73Q6ZRK6 1079 aa32.85■■■□□ 2.85
VEGFA-211ENST00000476772 CTDP1Q9Y5B0 961 aaPredicted RBP32.85■■■□□ 2.85
VEGFA-211ENST00000476772 A0A1B0GVL5 298 aa32.84■■■□□ 2.85
VEGFA-211ENST00000476772 CMA1P23946 247 aa32.84■■■□□ 2.85
VEGFA-211ENST00000476772 AP3B2Q13367 1082 aa32.84■■■□□ 2.85
VEGFA-211ENST00000476772 GADL1Q6ZQY3 521 aa32.84■■■□□ 2.85
VEGFA-211ENST00000476772 P2RX7Q99572 595 aaKnown RBP32.84■■■□□ 2.85
VEGFA-211ENST00000476772 COL11A1P12107 1806 aaPredicted RBP32.83■■■□□ 2.85
VEGFA-211ENST00000476772 CCNT1O60563 726 aaKnown RBP32.83■■■□□ 2.85
VEGFA-211ENST00000476772 C4orf32Q8N8J7 132 aa32.83■■■□□ 2.85
VEGFA-211ENST00000476772 ANO3Q9BYT9 981 aa32.83■■■□□ 2.85
VEGFA-211ENST00000476772 GBA2Q9HCG7 927 aaPredicted RBP32.83■■■□□ 2.85
VEGFA-211ENST00000476772 MYH7BA7E2Y1 1941 aa32.83■■■□□ 2.85
VEGFA-211ENST00000476772 PIK3CDO00329 1044 aa32.82■■■□□ 2.84
VEGFA-211ENST00000476772 EDIL3O43854 480 aa32.82■■■□□ 2.84
VEGFA-211ENST00000476772 CELF2O95319 508 aaKnown RBP32.82■■■□□ 2.84
VEGFA-211ENST00000476772 PROCA1Q8NCQ7 364 aaPredicted RBP32.82■■■□□ 2.84
VEGFA-211ENST00000476772 UNCXA6NJT0 531 aa32.82■■■□□ 2.84
VEGFA-211ENST00000476772 HOXA13P31271 388 aaPredicted RBP32.82■■■□□ 2.84
VEGFA-211ENST00000476772 FKBP1BP68106 108 aa32.82■■■□□ 2.84
VEGFA-211ENST00000476772 FAM160A1Q05DH4 1040 aa32.82■■■□□ 2.84
VEGFA-211ENST00000476772 MCTP2Q6DN12 878 aa32.82■■■□□ 2.84
VEGFA-211ENST00000476772 ENGASEQ8NFI3 743 aa32.82■■■□□ 2.84
VEGFA-211ENST00000476772 TBC1D5Q92609 795 aa32.82■■■□□ 2.84
VEGFA-211ENST00000476772 SLC10A4Q96EP9 437 aa32.82■■■□□ 2.84
VEGFA-211ENST00000476772 ADAMTS5Q9UNA0 930 aa32.82■■■□□ 2.84
VEGFA-211ENST00000476772 CFBP00751 764 aa32.81■■■□□ 2.84
VEGFA-211ENST00000476772 GJA5P36382 358 aa32.81■■■□□ 2.84
VEGFA-211ENST00000476772 NDUFA8P51970 172 aa32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms