RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 FILIP1LQ4L180 1135 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 IGSF22Q8N9C0 903 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 CRKP46108 304 aa17.98■□□□□ 0.47
VARS2-207ENST00000476162 CABP7Q86V35 215 aa17.98■□□□□ 0.47
VARS2-207ENST00000476162 ZFPM1Q8IX07 1006 aa17.98■□□□□ 0.47
VARS2-207ENST00000476162 AK8Q96MA6 479 aa17.98■□□□□ 0.47
VARS2-207ENST00000476162 ZNF215Q9UL58 517 aaPredicted RBP17.98■□□□□ 0.47
VARS2-207ENST00000476162 AKR1B15C9JRZ8 316 aaPredicted RBP17.98■□□□□ 0.47
VARS2-207ENST00000476162 hCG_1984214I3L0E3 225 aa17.98■□□□□ 0.47
VARS2-207ENST00000476162 MPHOSPH10O00566 681 aaKnown RBP17.98■□□□□ 0.47
VARS2-207ENST00000476162 CCT6AP40227 531 aaKnown RBP17.98■□□□□ 0.47
VARS2-207ENST00000476162 TECP42680 631 aa17.98■□□□□ 0.47
VARS2-207ENST00000476162 ETF1P62495 437 aaKnown RBP17.98■□□□□ 0.47
VARS2-207ENST00000476162 KMT5BQ4FZB7 885 aa17.98■□□□□ 0.47
VARS2-207ENST00000476162 ZNF713Q8N859 430 aaPredicted RBP17.98■□□□□ 0.47
VARS2-207ENST00000476162 FLAD1Q8NFF5 587 aa17.98■□□□□ 0.47
VARS2-207ENST00000476162 FEZ2Q9UHY8 353 aaPredicted RBP17.98■□□□□ 0.47
VARS2-207ENST00000476162 PPP2R2CQ9Y2T4 447 aa17.98■□□□□ 0.47
VARS2-207ENST00000476162 QSER1Q2KHR3 1735 aa17.98■□□□□ 0.47
VARS2-207ENST00000476162 ZSCAN12O43309 604 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 KLRC4O43908 158 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 TUBB4AP04350 444 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 HLA-DOAP06340 250 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 PLCG1P19174 1290 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 ATP2B2Q01814 1243 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 RBL2Q08999 1139 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 ZNF543Q08ER8 600 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 KRT31Q15323 416 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 TRIM65Q6PJ69 517 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 PODNQ7Z5L7 613 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 KIAA0825Q8IV33 1275 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 ZNF397Q8NF99 534 aaPredicted RBP17.97■□□□□ 0.47
VARS2-207ENST00000476162 PCDHAC2Q9Y5I4 1007 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 ADAMTSL1Q8N6G6 1762 aa17.97■□□□□ 0.47
VARS2-207ENST00000476162 MYO3BQ8WXR4 1341 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 LRRC10BA6NIK2 292 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 KCNB1Q14721 858 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 TTBK2Q6IQ55 1244 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 TOGARAM2Q6ZUX3 1019 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 ADGRF4Q8IZF3 695 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 ADSSL1Q8N142 457 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 CPLX3Q8WVH0 158 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 JMJD4Q9H9V9 463 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 LIMA1Q9UHB6 759 aaKnown RBP17.96■□□□□ 0.47
VARS2-207ENST00000476162 COL11A2P13942 1736 aaPredicted RBP17.96■□□□□ 0.47
VARS2-207ENST00000476162 MYL1P05976 194 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 ADCY7P51828 1080 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 CACNB3P54284 484 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 PPFIBP1Q86W92 1011 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 DNAI1Q9UI46 699 aa17.96■□□□□ 0.47
VARS2-207ENST00000476162 TCP10Q12799 353 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 TCP11X2Q5H9J9 407 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 C2CD5Q86YS7 1000 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 ZDHHC15Q96MV8 337 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 PANX2Q96RD6 677 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 VPS16Q9H269 839 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 L2HGDHQ9H9P8 463 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 TRIM49BA6NDI0 452 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 KCNJ18B7U540 433 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 N4BP3O15049 544 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 RHOBTB3O94955 611 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 CYP2C19P33261 490 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 SLC16A2P36021 539 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 TXKP42681 527 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 SPAG1Q07617 926 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 KCNJ12Q14500 433 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 CUEDC2Q9H467 287 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 TAB2Q9NYJ8 693 aa17.95■□□□□ 0.46
VARS2-207ENST00000476162 ZNF219Q9P2Y4 722 aaPredicted RBP17.95■□□□□ 0.46
VARS2-207ENST00000476162 PNMA6FA0A0J9YX94 578 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 EDIL3O43854 480 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 PPP1R11O60927 126 aaPredicted RBP17.94■□□□□ 0.46
VARS2-207ENST00000476162 SLU7O95391 586 aaKnown RBP17.94■□□□□ 0.46
VARS2-207ENST00000476162 COPB1P53618 953 aaKnown RBP17.94■□□□□ 0.46
VARS2-207ENST00000476162 PMS1P54277 932 aaKnown RBP17.94■□□□□ 0.46
VARS2-207ENST00000476162 MTMR9Q96QG7 549 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 MMTAG2Q9BU76 263 aaKnown RBP17.94■□□□□ 0.46
VARS2-207ENST00000476162 DNAJC18Q9H819 358 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.94■□□□□ 0.467e-11■■■■□ 20.4
VARS2-207ENST00000476162 V9GYY5 206 aaPredicted RBP17.94■□□□□ 0.46
VARS2-207ENST00000476162 MYH8P13535 1937 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 FAM196BA6NMK8 535 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 H7C1D1 291 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 HNRNPH2P55795 449 aaKnown RBP17.94■□□□□ 0.46
VARS2-207ENST00000476162 ORC2Q13416 577 aaPredicted RBP17.94■□□□□ 0.46
VARS2-207ENST00000476162 MTF1Q14872 753 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 CCDC96Q2M329 555 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 KCTD1Q719H9 257 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 GIMAP8Q8ND71 665 aaPredicted RBP17.94■□□□□ 0.46
VARS2-207ENST00000476162 EHD4Q9H223 541 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 MAGEF1Q9HAY2 307 aa17.94■□□□□ 0.46
VARS2-207ENST00000476162 GOLGB1Q14789 3259 aaKnown RBP17.93■□□□□ 0.46
VARS2-207ENST00000476162 PHLPP2Q6ZVD8 1323 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 SOWAHDA6NJG2 315 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 FANCGO15287 622 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 SLC37A4O43826 429 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 TDP2O95551 362 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 GYPCP04921 128 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 CASP14P31944 242 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms