RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 RESP18Q5W5W9 173 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 MCTP2Q6DN12 878 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 DLK2Q6UY11 383 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 NEK8Q86SG6 692 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 TEX2Q8IWB9 1127 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 ZNF579Q8NAF0 562 aaKnown RBP15.65■□□□□ 0.1
TRAF4-210ENST00000475329 ENGASEQ8NFI3 743 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 C12orf42Q96LP6 360 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 CLIC6Q96NY7 704 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 TNMDQ9H2S6 317 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 FBXO28Q9NVF7 368 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 SNCAIPQ9Y6H5 919 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 ZHX2Q9Y6X8 837 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 FAM237AA0A1B0GTK4 181 aa15.64■□□□□ 0.09
TRAF4-210ENST00000475329 A0A1B0GVL5 298 aa15.64■□□□□ 0.09
TRAF4-210ENST00000475329 GOLGA6L3A6NEY3 463 aa15.64■□□□□ 0.09
TRAF4-210ENST00000475329 NDUFA8P51970 172 aa15.64■□□□□ 0.09
TRAF4-210ENST00000475329 PTGDRQ13258 359 aa15.64■□□□□ 0.09
TRAF4-210ENST00000475329 CCDC174Q6PII3 467 aa15.64■□□□□ 0.09
TRAF4-210ENST00000475329 SHC4Q6S5L8 630 aa15.64■□□□□ 0.09
TRAF4-210ENST00000475329 SAMD1Q6SPF0 538 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-210ENST00000475329 LRSAM1Q6UWE0 723 aa15.64■□□□□ 0.09
TRAF4-210ENST00000475329 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-210ENST00000475329 FMR1NBQ8N0W7 255 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-210ENST00000475329 PRPF38AQ8NAV1 312 aaKnown RBP15.64■□□□□ 0.09
TRAF4-210ENST00000475329 TBCKQ8TEA7 893 aa15.64■□□□□ 0.09
TRAF4-210ENST00000475329 RPAP3Q9H6T3 665 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-210ENST00000475329 ABCB11O95342 1321 aa15.64■□□□□ 0.09
TRAF4-210ENST00000475329 A0A0G2JMZ2 1700 aa15.63■□□□□ 0.09
TRAF4-210ENST00000475329 LAD1O00515 517 aa15.63■□□□□ 0.09
TRAF4-210ENST00000475329 CTAGE5O15320 804 aa15.63■□□□□ 0.09
TRAF4-210ENST00000475329 AP3B2Q13367 1082 aa15.63■□□□□ 0.09
TRAF4-210ENST00000475329 SNW1Q13573 536 aaKnown RBP15.63■□□□□ 0.09
TRAF4-210ENST00000475329 DGKZQ13574 1117 aa15.63■□□□□ 0.09
TRAF4-210ENST00000475329 TTLL12Q14166 644 aaPredicted RBP15.63■□□□□ 0.09
TRAF4-210ENST00000475329 MAP3K11Q16584 847 aa15.63■□□□□ 0.09
TRAF4-210ENST00000475329 ARL6IP4Q66PJ3 421 aaKnown RBP15.63■□□□□ 0.09
TRAF4-210ENST00000475329 RBM46Q8TBY0 533 aaKnown RBP15.63■□□□□ 0.09
TRAF4-210ENST00000475329 FAM13BQ9NYF5 915 aa15.63■□□□□ 0.09
TRAF4-210ENST00000475329 TMOD4Q9NZQ9 345 aa15.63■□□□□ 0.09
TRAF4-210ENST00000475329 AFG3L2Q9Y4W6 797 aa15.63■□□□□ 0.09
TRAF4-210ENST00000475329 MRVI1Q9Y6F6 885 aa15.63■□□□□ 0.09
TRAF4-210ENST00000475329 FSD2A1L4K1 749 aa15.62■□□□□ 0.09
TRAF4-210ENST00000475329 FLOT1O75955 427 aa15.62■□□□□ 0.09
TRAF4-210ENST00000475329 FDX1P10109 184 aa15.62■□□□□ 0.09
TRAF4-210ENST00000475329 SYKP43405 635 aa15.62■□□□□ 0.09
TRAF4-210ENST00000475329 HMGCS2P54868 508 aa15.62■□□□□ 0.09
TRAF4-210ENST00000475329 LETM2Q2VYF4 491 aa15.62■□□□□ 0.09
TRAF4-210ENST00000475329 ANKRD13AQ8IZ07 590 aa15.62■□□□□ 0.09
TRAF4-210ENST00000475329 NAP1L4Q99733 375 aaKnown RBP15.62■□□□□ 0.09
TRAF4-210ENST00000475329 PNMA2Q9UL42 364 aa15.62■□□□□ 0.09
TRAF4-210ENST00000475329 PPP1R9AQ9ULJ8 1098 aa15.62■□□□□ 0.09
TRAF4-210ENST00000475329 CLEC11AQ9Y240 323 aa15.62■□□□□ 0.09
TRAF4-210ENST00000475329 HPSEQ9Y251 543 aa15.62■□□□□ 0.09
TRAF4-210ENST00000475329 MRPL11Q9Y3B7 192 aaKnown RBP15.62■□□□□ 0.09
TRAF4-210ENST00000475329 TRPM7Q96QT4 1865 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 NEMFO60524 1076 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 CCNT1O60563 726 aaKnown RBP15.61■□□□□ 0.09
TRAF4-210ENST00000475329 FOSP01100 380 aaPredicted RBP15.61■□□□□ 0.09
TRAF4-210ENST00000475329 ICAM1P05362 532 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 TAL1P17542 331 aaPredicted RBP15.61■□□□□ 0.09
TRAF4-210ENST00000475329 GRIN1Q05586 938 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 CAMK4Q16566 473 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 SH3D19Q5HYK7 790 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 RBM43Q6ZSC3 357 aaKnown RBP15.61■□□□□ 0.09
TRAF4-210ENST00000475329 ARMC9Q7Z3E5 817 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 LDHDQ86WU2 507 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 C4orf32Q8N8J7 132 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 ANO3Q9BYT9 981 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 CSRNP2Q9H175 543 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 TSPY26PQ9H489 355 aa15.61■□□□□ 0.09
TRAF4-210ENST00000475329 CTDP1Q9Y5B0 961 aaPredicted RBP15.61■□□□□ 0.09
TRAF4-210ENST00000475329 VWA3AA6NCI4 1184 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 USP17L15C9J2P7 530 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 USP17L13C9JLJ4 530 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 USP17L11C9JVI0 530 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 USP17L18D6R9N7 530 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 USP17L22D6RA61 530 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 USP17L17D6RBQ6 530 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 USP17L19D6RCP7 530 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 USP17L20D6RJB6 530 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 PIK3CDO00329 1044 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 MEIS2O14770 477 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 ZBED4O75132 1171 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 ZNF202O95125 648 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 PRPHP41219 470 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 USP17L24Q0WX57 530 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 L1TD1Q5T7N2 865 aaKnown RBP15.6■□□□□ 0.09
TRAF4-210ENST00000475329 USP17L6PQ6QN14 398 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 GAS2L3Q86XJ1 694 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 TIGD1Q96MW7 591 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 SLC38A10Q9HBR0 1119 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 KCNH3Q9ULD8 1083 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 CCPG1Q9ULG6 757 aa15.6■□□□□ 0.09
TRAF4-210ENST00000475329 SPDYE3A6NKU9 549 aa15.59■□□□□ 0.09
TRAF4-210ENST00000475329 OPLAHO14841 1288 aa15.59■□□□□ 0.09
TRAF4-210ENST00000475329 OR52Z1P0C646 297 aa15.59■□□□□ 0.09
TRAF4-210ENST00000475329 GCFC2P16383 781 aaKnown RBP15.59■□□□□ 0.09
TRAF4-210ENST00000475329 DEKP35659 375 aaKnown RBP15.59■□□□□ 0.09
TRAF4-210ENST00000475329 LONP1P36776 959 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms