RNA–Protein interactions for RNA: ENST00000475327.1

CCT4P1-201, Transcript of chaperonin containing TCP1 subunit 4 pseudogene 1, humanhuman

BASIC

Gene CCT4P1, Length 1,558 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P1-201ENST00000475327 REXO1Q8N1G1 1221 aaKnown RBP13.12□□□□□ -0.31
CCT4P1-201ENST00000475327 CHAMP1Q96JM3 812 aa13.12□□□□□ -0.31
CCT4P1-201ENST00000475327 RAVER2Q9HCJ3 691 aaKnown RBP13.12□□□□□ -0.31
CCT4P1-201ENST00000475327 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
CCT4P1-201ENST00000475327 PCDHA6Q9UN73 950 aa13.12□□□□□ -0.31
CCT4P1-201ENST00000475327 PCDHA8Q9Y5H6 950 aa13.12□□□□□ -0.31
CCT4P1-201ENST00000475327 COL11A1P12107 1806 aaPredicted RBP13.12□□□□□ -0.31
CCT4P1-201ENST00000475327 RLFQ13129 1914 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 FIBPO43427 364 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 PTMSP20962 102 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 FSTL1Q12841 308 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 RILPL1Q5EBL4 403 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 PIK3AP1Q6ZUJ8 805 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 KRT25Q7Z3Z0 450 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 RASGRP4Q8TDF6 673 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 AGBL1Q96MI9 1066 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 SCAND2PQ9GZW5 306 aaPredicted RBP13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 BIN2Q9UBW5 565 aaPredicted RBP13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 CCL15-CCL14A0A0B4J2E2 113 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 TMEM88BA6NKF7 163 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 ALAS1P13196 640 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 CCL15Q16663 113 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 JAKMIP3Q5VZ66 844 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 MCTP2Q6DN12 878 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 SAPCD2Q86UD0 394 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 TNFRSF25Q93038 417 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 SPATA32Q96LK8 384 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 ABT1Q9ULW3 272 aaKnown RBP13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 TLL2Q9Y6L7 1015 aa13.11□□□□□ -0.31
CCT4P1-201ENST00000475327 ZNF536O15090 1300 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 M0R2N6 131 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 ADAMTS3O15072 1205 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 TAL1P17542 331 aaPredicted RBP13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 ATP2B1P20020 1258 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 OAZ1P54368 228 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 MOGSQ13724 837 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 PLS1Q14651 629 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 NONOQ15233 471 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 UBE2SQ16763 222 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 GPAT2Q6NUI2 795 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 RASAL3Q86YV0 1011 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 MB21D1Q8N884 522 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 ZNF784Q8NCA9 323 aaPredicted RBP13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 USP28Q96RU2 1077 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 P2RX7Q99572 595 aaKnown RBP13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 GDPD2Q9HCC8 539 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 ADAMTS5Q9UNA0 930 aa13.1□□□□□ -0.31
CCT4P1-201ENST00000475327 SMCHD1A6NHR9 2005 aa13.09□□□□□ -0.31
CCT4P1-201ENST00000475327 PRPF40AO75400 957 aaKnown RBP13.09□□□□□ -0.31
CCT4P1-201ENST00000475327 STK38Q15208 465 aa13.09□□□□□ -0.31
CCT4P1-201ENST00000475327 EARS2Q5JPH6 523 aaKnown RBP13.09□□□□□ -0.31
CCT4P1-201ENST00000475327 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
CCT4P1-201ENST00000475327 SNRNP48Q6IEG0 339 aaKnown RBP13.09□□□□□ -0.31
CCT4P1-201ENST00000475327 MCF2L2Q86YR7 1114 aa13.09□□□□□ -0.31
CCT4P1-201ENST00000475327 TMEM260Q9NX78 707 aa13.09□□□□□ -0.31
CCT4P1-201ENST00000475327 RTEL1Q9NZ71 1219 aa13.09□□□□□ -0.31
CCT4P1-201ENST00000475327 CEP131Q9UPN4 1083 aa13.09□□□□□ -0.31
CCT4P1-201ENST00000475327 CLIC4Q9Y696 253 aa13.09□□□□□ -0.31
CCT4P1-201ENST00000475327 FAM205CA6NFA0 338 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 GCOM1H8Y6P7 765 aaPredicted RBP13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 CFBP00751 764 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 POLR2MP0CAP2 368 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 TRAPPC10P48553 1259 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 CLK2P49760 499 aaKnown RBP13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 HERVK_113P62684 666 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 TMEM132BQ14DG7 1078 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 TKFCQ3LXA3 575 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 NOM1Q5C9Z4 860 aaKnown RBP13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 USP17L6PQ6QN14 398 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 ANKRD23Q86SG2 305 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 TEX2Q8IWB9 1127 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 REPS2Q8NFH8 660 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 LEO1Q8WVC0 666 aaPredicted RBP13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 CCDC102AQ96A19 550 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 TRERF1Q96PN7 1200 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 FTOQ9C0B1 505 aaKnown RBP eCLIP13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 HOMER2Q9NSB8 354 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 POLR3EQ9NVU0 708 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 SLC45A1Q9Y2W3 748 aa13.08□□□□□ -0.32
CCT4P1-201ENST00000475327 MANSC4A6NHS7 340 aaPredicted RBP13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 SPDYE3A6NKU9 549 aa13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 BTBD19C9JJ37 291 aa13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 PDHXO00330 501 aa13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 MEIS2O14770 477 aa13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 ATP2A1O14983 1001 aa13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 YEATS4O95619 227 aa13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 FOSP01100 380 aaPredicted RBP13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 STAT3P40763 770 aa13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 TOB1P50616 345 aaPredicted RBP13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 AP3B2Q13367 1082 aa13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 INF2Q27J81 1249 aa13.07□□□□□ -0.32
CCT4P1-201ENST00000475327 TTC38Q5R3I4 469 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms