RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 TLK2Q86UE8 772 aa15.84■□□□□ 0.13
COPS7B-219ENST00000474042 SLC43A3Q8NBI5 491 aa15.84■□□□□ 0.13
COPS7B-219ENST00000474042 MAFAQ8NHW3 353 aaPredicted RBP15.84■□□□□ 0.13
COPS7B-219ENST00000474042 DCAF4Q8WV16 495 aa15.84■□□□□ 0.13
COPS7B-219ENST00000474042 CHMP4CQ96CF2 233 aa15.84■□□□□ 0.13
COPS7B-219ENST00000474042 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.84■□□□□ 0.133e-7■■■■□ 21.3
COPS7B-219ENST00000474042 COL25A1Q9BXS0 654 aaPredicted RBP15.84■□□□□ 0.13
COPS7B-219ENST00000474042 RANBP17Q9H2T7 1088 aaKnown RBP15.84■□□□□ 0.13
COPS7B-219ENST00000474042 HELLSQ9NRZ9 838 aa15.84■□□□□ 0.13
COPS7B-219ENST00000474042 GBF1Q92538 1859 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 A0A0D9SFI3 127 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 RANBP6O60518 1105 aaKnown RBP15.83■□□□□ 0.12
COPS7B-219ENST00000474042 CD4P01730 458 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 ICAM1P05362 532 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 DNAJB2P25686 324 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 SNAP25P60880 206 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 BEX3Q00994 111 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 PPIGQ13427 754 aaKnown RBP eCLIP15.83■□□□□ 0.122e-6■□□□□ 9.8
COPS7B-219ENST00000474042 HDAC1Q13547 482 aaPredicted RBP15.83■□□□□ 0.12
COPS7B-219ENST00000474042 ANKRD45Q5TZF3 282 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 RASIP1Q5U651 963 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 BTNL9Q6UXG8 535 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 TICAM2Q86XR7 235 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 MORC4Q8TE76 937 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 CRBNQ96SW2 442 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 CCPG1Q9ULG6 757 aa15.83■□□□□ 0.12
COPS7B-219ENST00000474042 DDX49Q9Y6V7 483 aaKnown RBP15.83■□□□□ 0.12
COPS7B-219ENST00000474042 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.82■□□□□ 0.12
COPS7B-219ENST00000474042 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.82■□□□□ 0.12
COPS7B-219ENST00000474042 TLR3O15455 904 aaKnown RBP15.82■□□□□ 0.12
COPS7B-219ENST00000474042 CCDC96Q2M329 555 aa15.82■□□□□ 0.12
COPS7B-219ENST00000474042 TMEM240Q5SV17 173 aa15.82■□□□□ 0.12
COPS7B-219ENST00000474042 TAPT1Q6NXT6 567 aa15.82■□□□□ 0.12
COPS7B-219ENST00000474042 C16orf59Q7L2K0 433 aa15.82■□□□□ 0.12
COPS7B-219ENST00000474042 FBXO16Q8IX29 292 aaPredicted RBP15.82■□□□□ 0.12
COPS7B-219ENST00000474042 FAM227BQ96M60 508 aa15.82■□□□□ 0.12
COPS7B-219ENST00000474042 CABYRO75952 493 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 FGAP02671 866 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 TOP1P11387 765 aaKnown RBP15.81■□□□□ 0.12
COPS7B-219ENST00000474042 FOSL2P15408 326 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 CSF2RAP15509 400 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 SMPD1P17405 629 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 PTGS1P23219 599 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 FSCN1Q16658 493 aaKnown RBP15.81■□□□□ 0.12
COPS7B-219ENST00000474042 TTBK2Q6IQ55 1244 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 CXCL17Q6UXB2 119 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 VTI1AQ96AJ9 217 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 VTA1Q9NP79 307 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 PDGFCQ9NRA1 345 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 TCP11L1Q9NUJ3 509 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
COPS7B-219ENST00000474042 Q9Y3F1 56 aa15.81■□□□□ 0.12
COPS7B-219ENST00000474042 GRIN2DO15399 1336 aa15.8■□□□□ 0.12
COPS7B-219ENST00000474042 LOC102724159A0A0B4J2E5 919 aa15.8■□□□□ 0.12
COPS7B-219ENST00000474042 PWP2Q15269 919 aaKnown RBP15.8■□□□□ 0.12
COPS7B-219ENST00000474042 MCMDC2Q4G0Z9 681 aa15.8■□□□□ 0.12
COPS7B-219ENST00000474042 SYDE2Q5VT97 1194 aa15.8■□□□□ 0.12
COPS7B-219ENST00000474042 IQSEC1Q6DN90 963 aa15.8■□□□□ 0.12
COPS7B-219ENST00000474042 PSRC1Q6PGN9 363 aaPredicted RBP15.8■□□□□ 0.12
COPS7B-219ENST00000474042 NSMFQ6X4W1 530 aa15.8■□□□□ 0.12
COPS7B-219ENST00000474042 ZNF589Q86UQ0 364 aaPredicted RBP15.8■□□□□ 0.12
COPS7B-219ENST00000474042 TMEM199Q8N511 208 aa15.8■□□□□ 0.12
COPS7B-219ENST00000474042 PURBQ96QR8 312 aaKnown RBP15.8■□□□□ 0.12
COPS7B-219ENST00000474042 TMEM47Q9BQJ4 181 aa15.8■□□□□ 0.12
COPS7B-219ENST00000474042 PPP1R12CQ9BZL4 782 aa15.8■□□□□ 0.12
COPS7B-219ENST00000474042 MTMR7Q9Y216 660 aa15.8■□□□□ 0.12
COPS7B-219ENST00000474042 SCN10AQ9Y5Y9 1956 aa15.8■□□□□ 0.12
COPS7B-219ENST00000474042 CCDC171Q6TFL3 1326 aa15.79■□□□□ 0.12
COPS7B-219ENST00000474042 NFIBO00712 420 aa15.79■□□□□ 0.12
COPS7B-219ENST00000474042 HSPD1P10809 573 aaKnown RBP15.79■□□□□ 0.12
COPS7B-219ENST00000474042 PDHBP11177 359 aa15.79■□□□□ 0.12
COPS7B-219ENST00000474042 SLC16A2P36021 539 aa15.79■□□□□ 0.12
COPS7B-219ENST00000474042 ALDH5A1P51649 535 aaPredicted RBP15.79■□□□□ 0.12
COPS7B-219ENST00000474042 NMIQ13287 307 aaPredicted RBP15.79■□□□□ 0.12
COPS7B-219ENST00000474042 ITGA7Q13683 1181 aa15.79■□□□□ 0.12
COPS7B-219ENST00000474042 GRIN2CQ14957 1233 aa15.79■□□□□ 0.12
COPS7B-219ENST00000474042 TMEM63BQ5T3F8 832 aa15.79■□□□□ 0.12
COPS7B-219ENST00000474042 NOL8Q76FK4 1167 aaKnown RBP15.79■□□□□ 0.12
COPS7B-219ENST00000474042 SEZ6LQ9BYH1 1024 aa15.79■□□□□ 0.12
COPS7B-219ENST00000474042 AP5M1Q9H0R1 490 aa15.79■□□□□ 0.12
COPS7B-219ENST00000474042 TANC1Q9C0D5 1861 aa15.79■□□□□ 0.12
COPS7B-219ENST00000474042 PRUNE2Q8WUY3 3088 aa15.79■□□□□ 0.12
COPS7B-219ENST00000474042 FRMPD2Q68DX3 1309 aaPredicted RBP15.78■□□□□ 0.12
COPS7B-219ENST00000474042 SNHG28P0DPA3 235 aa15.78■□□□□ 0.12
COPS7B-219ENST00000474042 PCP11498 1178 aaKnown RBP15.78■□□□□ 0.12
COPS7B-219ENST00000474042 CYP2C18P33260 490 aa15.78■□□□□ 0.12
COPS7B-219ENST00000474042 BAATQ14032 418 aaPredicted RBP15.78■□□□□ 0.12
COPS7B-219ENST00000474042 RRP12Q5JTH9 1297 aaKnown RBP15.78■□□□□ 0.12
COPS7B-219ENST00000474042 EEPD1Q7L9B9 569 aa15.78■□□□□ 0.12
COPS7B-219ENST00000474042 TBC1D10CQ8IV04 446 aa15.78■□□□□ 0.12
COPS7B-219ENST00000474042 TIFAQ96CG3 184 aa15.78■□□□□ 0.12
COPS7B-219ENST00000474042 HIPK3Q9H422 1215 aa15.78■□□□□ 0.12
COPS7B-219ENST00000474042 ZNF576Q9H609 170 aa15.78■□□□□ 0.12
COPS7B-219ENST00000474042 IL23AQ9NPF7 189 aa15.78■□□□□ 0.12
COPS7B-219ENST00000474042 TOMM22Q9NS69 142 aa15.78■□□□□ 0.12
COPS7B-219ENST00000474042 UMODL1Q5DID0 1318 aa15.77■□□□□ 0.12
COPS7B-219ENST00000474042 WDR19Q8NEZ3 1342 aa15.77■□□□□ 0.12
COPS7B-219ENST00000474042 RBM47A0AV96 593 aaKnown RBP15.77■□□□□ 0.12
COPS7B-219ENST00000474042 DYNC1LI2O43237 492 aaPredicted RBP15.77■□□□□ 0.12
COPS7B-219ENST00000474042 ZEB2O60315 1214 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms