RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CNNM4Q6P4Q7 775 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 FIBCD1Q8N539 461 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 FBLIM1Q8WUP2 373 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 PTPRN2Q92932 1015 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 VWCEQ96DN2 955 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 MRGPRX3Q96LB0 322 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 NKX2-4Q9H2Z4 354 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 NDOR1Q9UHB4 597 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 AQP7O14520 342 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 SHOXO15266 292 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 ASLP04424 464 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 MAP4P27816 1152 aaKnown RBP5.8□□□□□ -1.48
BRCA1-212ENST00000473961 CFPP27918 469 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 ZNF445P59923 1031 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 MESP2Q0VG99 397 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 CBX2Q14781 532 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-212ENST00000473961 SFRP5Q5T4F7 317 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 GTF2IRD2BQ6EKJ0 949 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 CDPF1Q6NVV7 123 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 DDX46Q7L014 1031 aaKnown RBP5.8□□□□□ -1.48
BRCA1-212ENST00000473961 GTF2IRD2Q86UP8 949 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 ZNF513Q8N8E2 541 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-212ENST00000473961 ENOX1Q8TC92 643 aaKnown RBP5.8□□□□□ -1.48
BRCA1-212ENST00000473961 BTN2A2Q8WVV5 523 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 SLC38A3Q99624 504 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 CYP26B1Q9NR63 512 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 KLHL42Q9P2K6 505 aa5.8□□□□□ -1.48
BRCA1-212ENST00000473961 A0A087X0B3 334 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 BIN1O00499 593 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 SIGLEC6O43699 453 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 OPA1O60313 960 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 GSNP06396 782 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 IGFALSP35858 605 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 NOP2P46087 812 aaKnown RBP5.79□□□□□ -1.48
BRCA1-212ENST00000473961 GFRA1P56159 465 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 EXOSC10Q01780 885 aaKnown RBP5.79□□□□□ -1.48
BRCA1-212ENST00000473961 PPP2R5DQ14738 602 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 NFKBIBQ15653 356 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 CLEC16AQ2KHT3 1053 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 SGO2Q562F6 1265 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 ODR4Q5SWX8 454 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 UBE2R2Q712K3 238 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-212ENST00000473961 RNF180Q86T96 592 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 TOP6BLQ8N6T0 577 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 ATL2Q8NHH9 583 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 BRF1Q92994 677 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 OSBP2Q969R2 916 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 MAGEB10Q96LZ2 347 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-212ENST00000473961 ZDHHC15Q96MV8 337 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 PRDM14Q9GZV8 571 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 CHST7Q9NS84 486 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 GFOD1Q9NXC2 390 aa5.79□□□□□ -1.48
BRCA1-212ENST00000473961 GSG1L2A8MUP6 293 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 SCG5P05408 212 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 ENDOUP21128 410 aaKnown RBP5.78□□□□□ -1.48
BRCA1-212ENST00000473961 GRIA2P42262 883 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 NEK4P51957 841 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 CYP27A1Q02318 531 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 CYP27C1Q4G0S4 372 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 TTLL10Q6ZVT0 673 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 WFDC3Q8IUB2 231 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 RIN3Q8TB24 985 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 PIWIL2Q8TC59 973 aaKnown RBP5.78□□□□□ -1.48
BRCA1-212ENST00000473961 DCAF4Q8WV16 495 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 DDX1Q92499 740 aaKnown RBP5.78□□□□□ -1.48
BRCA1-212ENST00000473961 FAM168AQ92567 244 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 ZFYVE21Q9BQ24 234 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 DUSP23Q9BVJ7 150 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 TARS2Q9BW92 718 aaKnown RBP5.78□□□□□ -1.48
BRCA1-212ENST00000473961 TRIT1Q9H3H1 467 aaKnown RBP5.78□□□□□ -1.48
BRCA1-212ENST00000473961 LGR6Q9HBX8 967 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 LMCD1Q9NZU5 365 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 TCEAL9Q9UHQ7 104 aa5.78□□□□□ -1.48
BRCA1-212ENST00000473961 GNAT3A8MTJ3 354 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 CYP26A1O43174 497 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 TBX1O43435 398 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 BRINP1O60477 761 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 DLX3O60479 287 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 CAPNS1P04632 268 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 POU3F2P20265 443 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-212ENST00000473961 ECI1P42126 302 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 NMIQ13287 307 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-212ENST00000473961 CDK5R2Q13319 367 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 ZNF792Q3KQV3 632 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 C22orf34Q6ZV56 151 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 BRAPQ7Z569 592 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 DTWD2Q8NBA8 298 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 GSTCDQ8NEC7 633 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 BHLHE22Q8NFJ8 381 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-212ENST00000473961 TOX2Q96NM4 488 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 CLUHP3Q96NS8 147 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 SLC52A2Q9HAB3 445 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 RAPGEFL1Q9UHV5 662 aa5.77□□□□□ -1.49
BRCA1-212ENST00000473961 TRBV23OR9-2A0A075B6M9 112 aa5.76□□□□□ -1.49
BRCA1-212ENST00000473961 EOMESO95936 686 aa5.76□□□□□ -1.49
BRCA1-212ENST00000473961 C6orf222P0C671 652 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-212ENST00000473961 SART3Q15020 963 aaKnown RBP5.76□□□□□ -1.49
BRCA1-212ENST00000473961 DHCR24Q15392 516 aa5.76□□□□□ -1.49
BRCA1-212ENST00000473961 STYK1Q6J9G0 422 aa5.76□□□□□ -1.49
BRCA1-212ENST00000473961 SEZ6L2Q6UXD5 910 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms