RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 A6NJR5 290 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 TTLL8A6PVC2 850 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 UBE2Q2LH0YL09 131 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 SNAP23O00161 211 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 SH2B2O14492 632 aaPredicted RBP6.55□□□□□ -1.36
HDAC8-216ENST00000470998 LILRA1O75019 489 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 TRPA1O75762 1119 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 TPM3P06753 285 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 ZBTB48P10074 688 aaPredicted RBP6.55□□□□□ -1.36
HDAC8-216ENST00000470998 TNNI2P48788 182 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 USP4Q13107 963 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 MAP7D1Q3KQU3 841 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 MFSD14BQ5SR56 506 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 AKNAD1Q5T1N1 836 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 PRAMEF18Q5VWM3 479 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 FBXO33Q7Z6M2 555 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 VPS37DQ86XT2 251 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 FAM177A1Q8N128 213 aaPredicted RBP6.55□□□□□ -1.36
HDAC8-216ENST00000470998 MAGEB6Q8N7X4 407 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 LEO1Q8WVC0 666 aaPredicted RBP6.55□□□□□ -1.36
HDAC8-216ENST00000470998 NUP62CLQ9H1M0 184 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 ZNF395Q9H8N7 513 aaPredicted RBP6.55□□□□□ -1.36
HDAC8-216ENST00000470998 LRP2BPQ9P2M1 347 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 CCDC39Q9UFE4 941 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 RCOR1Q9UKL0 485 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 TAF6LQ9Y6J9 622 aa6.55□□□□□ -1.36
HDAC8-216ENST00000470998 MORC2Q9Y6X9 1032 aaPredicted RBP6.55□□□□□ -1.36
HDAC8-216ENST00000470998 A0A1W2PQ27 194 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 A0A1W2PQ64 194 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 A0A1W2PQD8 194 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 CCDC85CA6NKD9 419 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 POM121CA8CG34 1229 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 F8W031 263 aaPredicted RBP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 MEN1O00255 615 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 SPINT1O43278 529 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 JAK2O60674 1132 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 MBD4O95243 580 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 APPP05067 770 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 SLC3A2P08195 630 aaKnown RBP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 CALM1P0DP23 149 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 CALM2P0DP24 149 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 CALM3P0DP25 149 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 SKIP12755 728 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 PTGIRP43119 386 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 GYG1P46976 350 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 IREB2P48200 963 aaKnown RBP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 TDO2P48775 406 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 METAP2P50579 478 aaKnown RBP eCLIP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 RBM5P52756 815 aaKnown RBP eCLIP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 APOBRQ0VD83 1088 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 STK3Q13188 491 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 TRIM29Q14134 588 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 DHX8Q14562 1220 aaKnown RBP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 CCDC178Q5BJE1 867 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 FOXD4L5Q5VV16 416 aaPredicted RBP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 APOA5Q6Q788 366 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 PI16Q6UXB8 463 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 CCDC73Q6ZRK6 1079 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 MFSD6Q6ZSS7 791 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 MOB2Q70IA6 237 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 CTU1Q7Z7A3 348 aaKnown RBP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 TTC6Q86TZ1 520 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 ZSCAN30Q86W11 494 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 TRIM22Q8IYM9 498 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 ANKRD13AQ8IZ07 590 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 IFNL3Q8IZI9 196 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 PLPP7Q8NBV4 271 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 FBXO18Q8NFZ0 1043 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 FOXD4L4Q8WXT5 416 aaPredicted RBP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 ESR2Q92731 530 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 HOOK2Q96ED9 719 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 C8orf76Q96K31 380 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 PRMT6Q96LA8 375 aaPredicted RBP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 TCEANC2Q96MN5 208 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 INSM2Q96T92 566 aaPredicted RBP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 PANK2Q9BZ23 570 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 ATP8A2Q9NTI2 1148 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 RTEL1Q9NZ71 1219 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 ORC3Q9UBD5 711 aaPredicted RBP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 USP25Q9UHP3 1055 aa6.54□□□□□ -1.36
HDAC8-216ENST00000470998 TTF2Q9UNY4 1162 aaKnown RBP6.54□□□□□ -1.36
HDAC8-216ENST00000470998 CCDC69A6NI79 296 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 GOLGA6L6A8MZA4 724 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 ZBTB43O43298 467 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 CTDNEP1O95476 244 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 IFNAR1P17181 557 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 XBP1P17861 261 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 MSNP26038 577 aaKnown RBP6.53□□□□□ -1.36
HDAC8-216ENST00000470998 ADD1P35611 737 aaKnown RBP6.53□□□□□ -1.36
HDAC8-216ENST00000470998 CRKP46108 304 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 SCTRP47872 440 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 ANTXR2P58335 489 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 GSTO1P78417 241 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 MLLT1Q03111 559 aaPredicted RBP6.53□□□□□ -1.36
HDAC8-216ENST00000470998 RASA3Q14644 834 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.53□□□□□ -1.36
HDAC8-216ENST00000470998 EML3Q32P44 896 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 FKBP1CQ5VVH2 108 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 OTUD7BQ6GQQ9 843 aa6.53□□□□□ -1.36
HDAC8-216ENST00000470998 FAM83AQ86UY5 434 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms