RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 SPATS2LQ9NUQ6 558 aaKnown RBP10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 RGPD8O14715 1765 aaPredicted RBP10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 NHSL1Q5SYE7 1610 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 WNT7AO00755 349 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 IFNAR1P17181 557 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 AMOTQ4VCS5 1084 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 AP1ARQ63HQ0 302 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 KLHL7Q8IXQ5 586 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 IQCKQ8N0W5 287 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 HVCN1Q96D96 273 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 SEC16BQ96JE7 1060 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 ZSWIM5Q9P217 1185 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 ZNF330Q9Y3S2 320 aaPredicted RBP10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 MYH10P35580 1976 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 PHF20L1A8MW92 1017 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 GCOM1H8Y6P7 765 aaPredicted RBP10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 MYZAPP0CAP1 466 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 TCP1P17987 556 aaKnown RBP10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 MTIF2P46199 727 aaKnown RBP10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 PMS1P54277 932 aaKnown RBP10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 FAM43BQ6ZT52 329 aaPredicted RBP10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 ZBTB10Q96DT7 871 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 L3MBTL1Q9Y468 752 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 MST1RQ04912 1400 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 KIF3CO14782 793 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 DEXIO95424 95 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 RPN1P04843 607 aaKnown RBP10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 SH3RF1Q7Z6J0 888 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 TTC5Q8N0Z6 440 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 ARFGAP2Q8N6H7 521 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 PROCA1Q8NCQ7 364 aaPredicted RBP10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 TSGA10Q9BZW7 698 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 NOD2Q9HC29 1040 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 LEMD3Q9Y2U8 911 aa10.57□□□□□ -0.72
NHLRC3-203ENST00000470258 PXDNQ92626 1479 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 ERICH2A1L162 156 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 HMGB1P1B2RPK0 211 aaPredicted RBP10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 ZNF263O14978 683 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 FOXO4P98177 505 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 PTGDRQ13258 359 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 ITGB3BPQ13352 177 aaPredicted RBP10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 DRP2Q13474 957 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 PROSER2Q86WR7 435 aaPredicted RBP10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 IRF2BP1Q8IU81 584 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 TUBGCP2Q9BSJ2 902 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 FAM207AQ9NSI2 230 aaPredicted RBP10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 EXOC1Q9NV70 894 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 RBM28Q9NW13 759 aaKnown RBP10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 PCDHA13Q9Y5I0 950 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 H7C1D1 291 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 RTN2O75298 545 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 MCM7P33993 719 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 WTAPQ15007 396 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 C6orf89Q6UWU4 347 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 TMC4Q7Z404 712 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 NAPBQ9H115 298 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 WDR17Q8IZU2 1322 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 WDR19Q8NEZ3 1342 aa10.56□□□□□ -0.72
NHLRC3-203ENST00000470258 KCNB1Q14721 858 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 PTPROQ16827 1216 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 CFAP221Q4G0U5 840 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 ZNF658Q5TYW1 1059 aaPredicted RBP10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 GKAP1Q5VSY0 366 aaPredicted RBP10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 TBC1D1Q86TI0 1168 aaPredicted RBP10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 PARD3BQ8TEW8 1205 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 ZNF483Q8TF39 744 aaPredicted RBP10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 LMBR1Q8WVP7 490 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 YIPF3Q9GZM5 350 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 ZBTB3Q9H5J0 574 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 TBC1D2BQ9UPU7 963 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 SLC4A4Q9Y6R1 1079 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 AP1G2O75843 785 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 ATP6V1G2O95670 118 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 CTNNA1P35221 906 aaKnown RBP10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 DNM2P50570 870 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 ZBED6P86452 979 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 RASSF7Q02833 373 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 ENOX2Q16206 610 aaKnown RBP10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 CCDC57Q2TAC2 916 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 CCDC170Q8IYT3 715 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 CSGALNACT2Q8N6G5 542 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 UBLCP1Q8WVY7 318 aaPredicted RBP10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 CASKIN2Q8WXE0 1202 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 SH2D4AQ9H788 454 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 PACSIN2Q9UNF0 486 aaPredicted RBP10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 KIF1AQ12756 1690 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 GTPBP6O43824 516 aaPredicted RBP10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 FTCDO95954 541 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 XBP1P17861 261 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 EIF4A3P38919 411 aaKnown RBP10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 STAT6P42226 847 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 MAGEA1P43355 309 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 KIF11P52732 1056 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 TCIRG1Q13488 830 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 TLDC1Q6P9B6 456 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 CRACR2BQ8N4Y2 399 aaPredicted RBP10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 PIK3R5Q8WYR1 880 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 MTRQ99707 1265 aa10.55□□□□□ -0.72
NHLRC3-203ENST00000470258 PAGR1Q9BTK6 254 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms