RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 COA7Q96BR5 231 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 C12orf42Q96LP6 360 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 PHOX2BQ99453 314 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 PHF20Q9BVI0 1012 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 GZF1Q9H116 711 aaPredicted RBP8.15□□□□□ -1.1
PMPCB-207ENST00000469560 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 PRR12Q9ULL5 1215 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 SYNPO2Q9UMS6 1093 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 BTBD18B2RXH4 712 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 CELF2O95319 508 aaKnown RBP8.14□□□□□ -1.11
PMPCB-207ENST00000469560 DEXIO95424 95 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 SCG2P13521 617 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 SMARCA1P28370 1054 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 SSTR3P32745 418 aaPredicted RBP8.14□□□□□ -1.11
PMPCB-207ENST00000469560 TOB1P50616 345 aaPredicted RBP8.14□□□□□ -1.11
PMPCB-207ENST00000469560 HMGN5P82970 282 aaKnown RBP8.14□□□□□ -1.11
PMPCB-207ENST00000469560 KIF23Q02241 960 aaPredicted RBP8.14□□□□□ -1.11
PMPCB-207ENST00000469560 CCDC96Q2M329 555 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 QRICH1Q2TAL8 776 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 GPAT2Q6NUI2 795 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 REPS2Q8NFH8 660 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 TBC1D5Q92609 795 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 ARHGEF10LQ9HCE6 1279 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 GINM1Q9NU53 330 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 KCNH4Q9UQ05 1017 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 TCHHQ07283 1943 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 CCDC196A0A1B0GTZ2 297 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 VPS37CA5D8V6 355 aaPredicted RBP8.14□□□□□ -1.11
PMPCB-207ENST00000469560 DHX16O60231 1041 aaKnown RBP8.14□□□□□ -1.11
PMPCB-207ENST00000469560 PPP1R12BO60237 982 aaPredicted RBP8.14□□□□□ -1.11
PMPCB-207ENST00000469560 BAG4O95429 457 aaKnown RBP8.14□□□□□ -1.11
PMPCB-207ENST00000469560 MMP1P03956 469 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 KIF5BP33176 963 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 CLCN1P35523 988 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 TMCO4Q5TGY1 634 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 HOMER1Q86YM7 354 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 ANKRD13AQ8IZ07 590 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 RASGRP4Q8TDF6 673 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 OPTNQ96CV9 577 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 C8orf76Q96K31 380 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 TRPM7Q96QT4 1865 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 ZIC5Q96T25 663 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 BEGAINQ9BUH8 593 aa8.14□□□□□ -1.11
PMPCB-207ENST00000469560 RPAP3Q9H6T3 665 aaPredicted RBP8.14□□□□□ -1.11
PMPCB-207ENST00000469560 GBA2Q9HCG7 927 aaPredicted RBP8.14□□□□□ -1.11
PMPCB-207ENST00000469560 COL11A1P12107 1806 aaPredicted RBP8.13□□□□□ -1.11
PMPCB-207ENST00000469560 A0A0G2JLL6 359 aaPredicted RBP8.13□□□□□ -1.11
PMPCB-207ENST00000469560 U2AF2P26368 475 aaKnown RBP eCLIP8.13□□□□□ -1.112e-10■■□□□ 11.9
PMPCB-207ENST00000469560 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
PMPCB-207ENST00000469560 DNM1Q05193 864 aaKnown RBP8.13□□□□□ -1.11
PMPCB-207ENST00000469560 GPATCH4Q5T3I0 446 aaKnown RBP8.13□□□□□ -1.11
PMPCB-207ENST00000469560 SYDE2Q5VT97 1194 aa8.13□□□□□ -1.11
PMPCB-207ENST00000469560 PRRT2Q7Z6L0 340 aaPredicted RBP8.13□□□□□ -1.11
PMPCB-207ENST00000469560 ERO1BQ86YB8 467 aa8.13□□□□□ -1.11
PMPCB-207ENST00000469560 HOOK2Q96ED9 719 aa8.13□□□□□ -1.11
PMPCB-207ENST00000469560 PTPN18Q99952 460 aa8.13□□□□□ -1.11
PMPCB-207ENST00000469560 RANBP17Q9H2T7 1088 aaKnown RBP8.13□□□□□ -1.11
PMPCB-207ENST00000469560 GDPD2Q9HCC8 539 aa8.13□□□□□ -1.11
PMPCB-207ENST00000469560 PICK1Q9NRD5 415 aa8.13□□□□□ -1.11
PMPCB-207ENST00000469560 BARHL2Q9NY43 387 aa8.13□□□□□ -1.11
PMPCB-207ENST00000469560 ADAMTS5Q9UNA0 930 aa8.13□□□□□ -1.11
PMPCB-207ENST00000469560 MYH15Q9Y2K3 1946 aa8.13□□□□□ -1.11
PMPCB-207ENST00000469560 A0A0G2JMZ2 1700 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 PNMA6FA0A0J9YX94 578 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 ZBTB5O15062 677 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 PLA2G6O60733 806 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 CNMDO75829 334 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 CDKL5O76039 1030 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 GNAQP50148 359 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 NUCB2P80303 420 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 PPATQ06203 517 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 PPIL2Q13356 520 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 CDC37Q16543 378 aaPredicted RBP8.12□□□□□ -1.11
PMPCB-207ENST00000469560 CATSPERGQ6ZRH7 1159 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 DIS3L2Q8IYB7 885 aaKnown RBP8.12□□□□□ -1.11
PMPCB-207ENST00000469560 FAM184AQ8NB25 1140 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 ZNF784Q8NCA9 323 aaPredicted RBP8.12□□□□□ -1.11
PMPCB-207ENST00000469560 KIFC2Q96AC6 838 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 ATG4CQ96DT6 458 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 AGBL1Q96MI9 1066 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 LZTS2Q9BRK4 669 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 CDHR5Q9HBB8 845 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 TMEM260Q9NX78 707 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 TFIP11Q9UBB9 837 aaKnown RBP8.12□□□□□ -1.11
PMPCB-207ENST00000469560 CNPY2Q9Y2B0 182 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 RIPK3Q9Y572 518 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 MRVI1Q9Y6F6 885 aa8.12□□□□□ -1.11
PMPCB-207ENST00000469560 WDR33Q9C0J8 1336 aaKnown RBP8.12□□□□□ -1.11
PMPCB-207ENST00000469560 FAM155AB1AL88 458 aaPredicted RBP8.11□□□□□ -1.11
PMPCB-207ENST00000469560 WDR46O15213 610 aaKnown RBP8.11□□□□□ -1.11
PMPCB-207ENST00000469560 GADD45BO75293 160 aaPredicted RBP8.11□□□□□ -1.11
PMPCB-207ENST00000469560 CLK2P49760 499 aaKnown RBP8.11□□□□□ -1.11
PMPCB-207ENST00000469560 NFKBIBQ15653 356 aa8.11□□□□□ -1.11
PMPCB-207ENST00000469560 HEATR3Q7Z4Q2 680 aa8.11□□□□□ -1.11
PMPCB-207ENST00000469560 SAPCD2Q86UD0 394 aa8.11□□□□□ -1.11
PMPCB-207ENST00000469560 CLEC4DQ8WXI8 215 aa8.11□□□□□ -1.11
PMPCB-207ENST00000469560 BRI3BPQ8WY22 251 aa8.11□□□□□ -1.11
PMPCB-207ENST00000469560 PGBD1Q96JS3 809 aa8.11□□□□□ -1.11
PMPCB-207ENST00000469560 USP28Q96RU2 1077 aa8.11□□□□□ -1.11
PMPCB-207ENST00000469560 FEZ1Q99689 392 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms