RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 SSRP1Q08945 709 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 FUT2Q10981 343 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 PPP2R5BQ15173 497 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 FAM160B2Q86V87 743 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 TRIM22Q8IYM9 498 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 ADGRF4Q8IZF3 695 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 HHIPL1Q96JK4 782 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 CAPNS2Q96L46 248 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 PIGSQ96S52 555 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 EPAS1Q99814 870 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 SLF1Q9BQI6 1058 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 SPZ1Q9BXG8 430 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 FEM1BQ9UK73 627 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 PRR12Q9ULL5 1215 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 SMC3Q9UQE7 1217 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 LRRC37A2A6NM11 1700 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 STK36Q9NRP7 1315 aa9.72□□□□□ -0.85
GAPVD1-213ENST00000469498 RASSF10A6NK89 507 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 USP17L15C9J2P7 530 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 BTBD19C9JJ37 291 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 USP17L13C9JLJ4 530 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 USP17L11C9JVI0 530 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 USP17L18D6R9N7 530 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 USP17L22D6RA61 530 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 USP17L17D6RBQ6 530 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 USP17L19D6RCP7 530 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 USP17L20D6RJB6 530 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 FMNL1O95466 1100 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 TAL1P17542 331 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 GJB2P29033 226 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 PSEN2P49810 448 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 IRX3P78415 501 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 AKAP17AQ02040 695 aaKnown RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 USP17L24Q0WX57 530 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 CDC37Q16543 378 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 DEFB115Q30KQ5 88 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 GPAT2Q6NUI2 795 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 CCDC174Q6PII3 467 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 BTNL9Q6UXG8 535 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 FASTKD5Q7L8L6 764 aaKnown RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 SMARCC2Q8TAQ2 1214 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 CHURC1Q8WUH1 139 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 GPKOWQ92917 476 aaPredicted RBP eCLIP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 CCDC102AQ96A19 550 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 ATG4CQ96DT6 458 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 RRP36Q96EU6 259 aaKnown RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 AIFM3Q96NN9 605 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 IPO9Q96P70 1041 aaKnown RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 ZIC5Q96T25 663 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 LZTS2Q9BRK4 669 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 LLPHQ9BRT6 129 aaKnown RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 RNF26Q9BY78 433 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 JMJD4Q9H9V9 463 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 ORC3Q9UBD5 711 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 PPP1R9AQ9ULJ8 1098 aa9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-213ENST00000469498 DOCK5Q9H7D0 1870 aa9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 MANSC4A6NHS7 340 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 PDHXO00330 501 aa9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 PRPF3O43395 683 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 AOC2O75106 756 aa9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 FDPSP14324 419 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 HMGN5P82970 282 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 PABPC4Q13310 644 aaKnown RBP eCLIP9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 QRICH1Q2TAL8 776 aa9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 TYW1BQ6NUM6 668 aa9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 CATSPERGQ6ZRH7 1159 aa9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 HEATR3Q7Z4Q2 680 aa9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 FAM43AQ8N2R8 423 aa9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 ZNF454Q8N9F8 522 aa9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 FAM184AQ8NB25 1140 aa9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 INTS4Q96HW7 963 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 ASCC2Q9H1I8 757 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 RIOX1Q9H6W3 641 aa9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 SEC63Q9UGP8 760 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 V9GY48 417 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-213ENST00000469498 IGF2BP3O00425 579 aaKnown RBP eCLIP9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 GPR37O15354 613 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 PEX10O60683 326 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 PLA2G6O60733 806 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 PPP1R11O60927 126 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 DEXIO95424 95 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 CYP2C8P10632 490 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 SCG2P13521 617 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 SMARCA1P28370 1054 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 HOXA7P31268 230 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 KIF23Q02241 960 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 SREBF2Q12772 1141 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 COG2Q14746 738 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 PKN1Q16512 942 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 USH1GQ495M9 461 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 WDR81Q562E7 1941 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 WWC2Q6AWC2 1192 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 ANKRD23Q86SG2 305 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 PRPF38AQ8NAV1 312 aaKnown RBP9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 PTPN18Q99952 460 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 ALG1Q9BT22 464 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 PAGR1Q9BTK6 254 aa9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 RANBP17Q9H2T7 1088 aaKnown RBP9.69□□□□□ -0.86
GAPVD1-213ENST00000469498 ZNF236Q9UL36 1845 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms