RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PLA2G2DQ9UNK4 145 aa7.42□□□□□ -1.22
XRN1-206ENST00000467077 TLR3O15455 904 aaKnown RBP7.41□□□□□ -1.22
XRN1-206ENST00000467077 ASGR2P07307 311 aa7.41□□□□□ -1.22
XRN1-206ENST00000467077 GSTM1P09488 218 aa7.41□□□□□ -1.22
XRN1-206ENST00000467077 ZNF761Q86XN6 746 aaPredicted RBP7.41□□□□□ -1.22
XRN1-206ENST00000467077 TMEM52Q8NDY8 209 aa7.41□□□□□ -1.22
XRN1-206ENST00000467077 FBXO27Q8NI29 283 aa7.41□□□□□ -1.22
XRN1-206ENST00000467077 ARID3AQ99856 593 aa7.41□□□□□ -1.22
XRN1-206ENST00000467077 PCDHB14Q9Y5E9 798 aa7.41□□□□□ -1.22
XRN1-206ENST00000467077 EAPPQ56P03 285 aaPredicted RBP7.4□□□□□ -1.22
XRN1-206ENST00000467077 USP48Q86UV5 1035 aa7.4□□□□□ -1.22
XRN1-206ENST00000467077 KISS1RQ969F8 398 aaPredicted RBP7.4□□□□□ -1.22
XRN1-206ENST00000467077 USP31Q70CQ4 1352 aa7.4□□□□□ -1.22
XRN1-206ENST00000467077 TACR1P25103 407 aa7.39□□□□□ -1.23
XRN1-206ENST00000467077 CORO7P57737 925 aa7.39□□□□□ -1.23
XRN1-206ENST00000467077 RTP2Q5QGT7 225 aa7.39□□□□□ -1.23
XRN1-206ENST00000467077 CDCP2Q5VXM1 449 aa7.39□□□□□ -1.23
XRN1-206ENST00000467077 FAM196AQ6ZSG2 479 aa7.39□□□□□ -1.23
XRN1-206ENST00000467077 CABP7Q86V35 215 aa7.39□□□□□ -1.23
XRN1-206ENST00000467077 ZFPM1Q8IX07 1006 aa7.39□□□□□ -1.23
XRN1-206ENST00000467077 RGS22Q8NE09 1264 aa7.39□□□□□ -1.23
XRN1-206ENST00000467077 SH3RF3Q8TEJ3 882 aaPredicted RBP7.39□□□□□ -1.23
XRN1-206ENST00000467077 IVNS1ABPQ9Y6Y0 642 aa7.39□□□□□ -1.23
XRN1-206ENST00000467077 SMARCA5O60264 1052 aaPredicted RBP7.38□□□□□ -1.23
XRN1-206ENST00000467077 SLPIP03973 132 aa7.38□□□□□ -1.23
XRN1-206ENST00000467077 TBC1D10BQ4KMP7 808 aaPredicted RBP7.38□□□□□ -1.23
XRN1-206ENST00000467077 CRB2Q5IJ48 1285 aa7.38□□□□□ -1.23
XRN1-206ENST00000467077 NLRC3Q7RTR2 1065 aa7.38□□□□□ -1.23
XRN1-206ENST00000467077 CNNM2Q9H8M5 875 aa7.38□□□□□ -1.23
XRN1-206ENST00000467077 ZNF536O15090 1300 aa7.37□□□□□ -1.23
XRN1-206ENST00000467077 MINDY4BA8MYZ0 360 aa7.37□□□□□ -1.23
XRN1-206ENST00000467077 PMLP29590 882 aa7.37□□□□□ -1.23
XRN1-206ENST00000467077 AUHQ13825 339 aaKnown RBP7.37□□□□□ -1.23
XRN1-206ENST00000467077 GLB1LQ6UWU2 654 aa7.37□□□□□ -1.23
XRN1-206ENST00000467077 FAM124AQ86V42 546 aa7.37□□□□□ -1.23
XRN1-206ENST00000467077 SMARCC2Q8TAQ2 1214 aa7.37□□□□□ -1.23
XRN1-206ENST00000467077 ADAMTS17Q8TE56 1095 aa7.37□□□□□ -1.23
XRN1-206ENST00000467077 ZBTB8AQ96BR9 441 aa7.37□□□□□ -1.23
XRN1-206ENST00000467077 RSRP1Q9BUV0 290 aa7.37□□□□□ -1.23
XRN1-206ENST00000467077 PARP2Q9UGN5 583 aa7.37□□□□□ -1.23
XRN1-206ENST00000467077 FZD7O75084 574 aa7.36□□□□□ -1.23
XRN1-206ENST00000467077 ATE1O95260 518 aa7.36□□□□□ -1.23
XRN1-206ENST00000467077 BORAQ6PGQ7 559 aa7.36□□□□□ -1.23
XRN1-206ENST00000467077 SPRED1Q7Z699 444 aa7.36□□□□□ -1.23
XRN1-206ENST00000467077 LGI4Q8N135 537 aa7.36□□□□□ -1.23
XRN1-206ENST00000467077 SLC6A18Q96N87 628 aa7.36□□□□□ -1.23
XRN1-206ENST00000467077 SLC12A9Q9BXP2 914 aa7.36□□□□□ -1.23
XRN1-206ENST00000467077 BRMS1Q9HCU9 246 aa7.36□□□□□ -1.23
XRN1-206ENST00000467077 DAB2P98082 770 aa7.35□□□□□ -1.23
XRN1-206ENST00000467077 XPCQ01831 940 aaPredicted RBP7.35□□□□□ -1.23
XRN1-206ENST00000467077 KIAA2012Q0VF49 1180 aa7.35□□□□□ -1.23
XRN1-206ENST00000467077 CRIP3Q6Q6R5 217 aa7.35□□□□□ -1.23
XRN1-206ENST00000467077 ATG4CQ96DT6 458 aa7.35□□□□□ -1.23
XRN1-206ENST00000467077 TSPAN17Q96FV3 270 aa7.35□□□□□ -1.23
XRN1-206ENST00000467077 ST6GALNAC2Q9UJ37 374 aa7.35□□□□□ -1.23
XRN1-206ENST00000467077 NUDT5Q9UKK9 219 aa7.35□□□□□ -1.23
XRN1-206ENST00000467077 ROBO2Q9HCK4 1378 aa7.34□□□□□ -1.23
XRN1-206ENST00000467077 FGF10O15520 208 aaPredicted RBP7.34□□□□□ -1.23
XRN1-206ENST00000467077 TBC1D8O95759 1140 aa7.34□□□□□ -1.23
XRN1-206ENST00000467077 CTSHP09668 335 aa7.34□□□□□ -1.23
XRN1-206ENST00000467077 RGL3Q3MIN7 710 aa7.34□□□□□ -1.23
XRN1-206ENST00000467077 CDK5RAP1Q96SZ6 601 aaKnown RBP7.34□□□□□ -1.23
XRN1-206ENST00000467077 LRRC3Q9BY71 257 aa7.34□□□□□ -1.23
XRN1-206ENST00000467077 TSC22D4Q9Y3Q8 395 aa7.34□□□□□ -1.23
XRN1-206ENST00000467077 L1CAMP32004 1257 aa7.33□□□□□ -1.24
XRN1-206ENST00000467077 ACVRL1P37023 503 aa7.33□□□□□ -1.24
XRN1-206ENST00000467077 NOP2P46087 812 aaKnown RBP7.33□□□□□ -1.24
XRN1-206ENST00000467077 TRIM26Q12899 539 aaPredicted RBP7.33□□□□□ -1.24
XRN1-206ENST00000467077 TMEM192Q8IY95 271 aa7.33□□□□□ -1.24
XRN1-206ENST00000467077 Q8N1X5 172 aa7.33□□□□□ -1.24
XRN1-206ENST00000467077 GTF3C3Q9Y5Q9 886 aa7.33□□□□□ -1.24
XRN1-206ENST00000467077 CCDC144CPQ8IYA2 1237 aa7.32□□□□□ -1.24
XRN1-206ENST00000467077 C7orf61Q8IZ16 206 aa7.32□□□□□ -1.24
XRN1-206ENST00000467077 CPA5Q8WXQ8 436 aa7.32□□□□□ -1.24
XRN1-206ENST00000467077 NOX5Q96PH1 765 aa7.32□□□□□ -1.24
XRN1-206ENST00000467077 SRRTQ9BXP5 876 aaKnown RBP7.32□□□□□ -1.24
XRN1-206ENST00000467077 VPS11Q9H270 941 aa7.32□□□□□ -1.24
XRN1-206ENST00000467077 BCAS3Q9H6U6 928 aa7.32□□□□□ -1.24
XRN1-206ENST00000467077 SPATA6Q9NWH7 488 aaPredicted RBP7.32□□□□□ -1.24
XRN1-206ENST00000467077 INVSQ9Y283 1065 aa7.32□□□□□ -1.24
XRN1-206ENST00000467077 SUPT16HQ9Y5B9 1047 aaKnown RBP7.32□□□□□ -1.24
XRN1-206ENST00000467077 H0Y8X5 98 aa7.31□□□□□ -1.24
XRN1-206ENST00000467077 GARTP22102 1010 aa7.31□□□□□ -1.24
XRN1-206ENST00000467077 CACNB2Q08289 660 aaPredicted RBP7.31□□□□□ -1.24
XRN1-206ENST00000467077 SMAD4Q13485 552 aaKnown RBP7.31□□□□□ -1.24
XRN1-206ENST00000467077 PEX11GQ96HA9 241 aa7.31□□□□□ -1.24
XRN1-206ENST00000467077 RXFP1Q9HBX9 757 aa7.31□□□□□ -1.24
XRN1-206ENST00000467077 GLI4P10075 376 aa7.3□□□□□ -1.24
XRN1-206ENST00000467077 NME1P15531 152 aaKnown RBP7.3□□□□□ -1.24
XRN1-206ENST00000467077 SLC9A5Q14940 896 aa7.3□□□□□ -1.24
XRN1-206ENST00000467077 LRRFIP1Q32MZ4 808 aaKnown RBP7.3□□□□□ -1.24
XRN1-206ENST00000467077 FAM26FQ5R3K3 315 aa7.3□□□□□ -1.24
XRN1-206ENST00000467077 NOL9Q5SY16 702 aaKnown RBP7.3□□□□□ -1.24
XRN1-206ENST00000467077 PTCHD1Q96NR3 888 aa7.3□□□□□ -1.24
XRN1-206ENST00000467077 EHMT1Q9H9B1 1298 aa7.3□□□□□ -1.24
XRN1-206ENST00000467077 MROH6A6NGR9 719 aa7.29□□□□□ -1.24
XRN1-206ENST00000467077 TNFRSF10CO14798 259 aa7.29□□□□□ -1.24
XRN1-206ENST00000467077 CYP2C8P10632 490 aa7.29□□□□□ -1.24
XRN1-206ENST00000467077 GK5Q6ZS86 529 aa7.29□□□□□ -1.24
XRN1-206ENST00000467077 TMC4Q7Z404 712 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms