RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 TRAPPC10P48553 1259 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 GTF2A2P52657 109 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 MKRN3Q13064 507 aaKnown RBP13.87□□□□□ -0.19
VPS16-206ENST00000466415 UBE2SQ16763 222 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 JAKMIP3Q5VZ66 844 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 MCTP2Q6DN12 878 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 LEO1Q8WVC0 666 aaPredicted RBP13.87□□□□□ -0.19
VPS16-206ENST00000466415 FTOQ9C0B1 505 aaKnown RBP eCLIP13.87□□□□□ -0.19
VPS16-206ENST00000466415 RAVER2Q9HCJ3 691 aaKnown RBP13.87□□□□□ -0.19
VPS16-206ENST00000466415 RTEL1Q9NZ71 1219 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 BIN2Q9UBW5 565 aaPredicted RBP13.87□□□□□ -0.19
VPS16-206ENST00000466415 CLIC4Q9Y696 253 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 ELP1O95163 1332 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 TRPM7Q96QT4 1865 aa13.87□□□□□ -0.19
VPS16-206ENST00000466415 FAM205CA6NFA0 338 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 VWA5AO00534 786 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 ZBTB48P10074 688 aaPredicted RBP13.86□□□□□ -0.19
VPS16-206ENST00000466415 CETPP11597 493 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 ALAS1P13196 640 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 TAL1P17542 331 aaPredicted RBP13.86□□□□□ -0.19
VPS16-206ENST00000466415 GJA5P36382 358 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 NASPP49321 788 aaPredicted RBP13.86□□□□□ -0.19
VPS16-206ENST00000466415 OAZ1P54368 228 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 TPRNQ4KMQ1 711 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 TTC38Q5R3I4 469 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 CST9Q5W186 159 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 JMYQ8N9B5 988 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 KCNG4Q8TDN1 519 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 AGBL1Q96MI9 1066 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 TMEM260Q9NX78 707 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 PNMA3Q9UL41 463 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 PTPRFP10586 1907 aa13.86□□□□□ -0.19
VPS16-206ENST00000466415 CCL15-CCL14A0A0B4J2E2 113 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 SPDYE3A6NKU9 549 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 SPDYE16A6NNV3 312 aaPredicted RBP13.85□□□□□ -0.19
VPS16-206ENST00000466415 GCOM1H8Y6P7 765 aaPredicted RBP13.85□□□□□ -0.19
VPS16-206ENST00000466415 M0R2N6 131 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 BMP15O95972 392 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 MBD3O95983 291 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 POLR2MP0CAP2 368 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 HOXA7P31268 230 aaPredicted RBP13.85□□□□□ -0.19
VPS16-206ENST00000466415 ME1P48163 572 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 AP3B2Q13367 1082 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 CCL15Q16663 113 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 INF2Q27J81 1249 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 SKOR2Q2VWA4 1001 aaPredicted RBP13.85□□□□□ -0.19
VPS16-206ENST00000466415 EARS2Q5JPH6 523 aaKnown RBP13.85□□□□□ -0.19
VPS16-206ENST00000466415 MCF2L2Q86YR7 1114 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 TEX2Q8IWB9 1127 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 EHMT1Q9H9B1 1298 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 LMBRD1Q9NUN5 540 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 ZNF536O15090 1300 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 PASKQ96RG2 1323 aa13.85□□□□□ -0.19
VPS16-206ENST00000466415 ADAMTS3O15072 1205 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 SPTLC2O15270 562 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 CFBP00751 764 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 ZNF157P51786 506 aaPredicted RBP13.84□□□□□ -0.19
VPS16-206ENST00000466415 UBE2HP62256 183 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 PLS1Q14651 629 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 NOM1Q5C9Z4 860 aaKnown RBP13.84□□□□□ -0.19
VPS16-206ENST00000466415 SPRYD7Q5W111 196 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 SNRNP48Q6IEG0 339 aaKnown RBP13.84□□□□□ -0.19
VPS16-206ENST00000466415 NEK8Q86SG6 692 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 MB21D1Q8N884 522 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 LINC00301Q8NCQ3 95 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 PGBD1Q96JS3 809 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 TEX13BQ9BXU2 312 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 ANO3Q9BYT9 981 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 HOMER2Q9NSB8 354 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 RCOR1Q9UKL0 485 aa13.84□□□□□ -0.19
VPS16-206ENST00000466415 DDX49Q9Y6V7 483 aaKnown RBP13.84□□□□□ -0.19
VPS16-206ENST00000466415 PARP14Q460N5 1801 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 TOMM70O94826 608 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 FOSP01100 380 aaPredicted RBP13.83□□□□□ -0.2
VPS16-206ENST00000466415 YY1P25490 414 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 CLK2P49760 499 aaKnown RBP13.83□□□□□ -0.2
VPS16-206ENST00000466415 TOB1P50616 345 aaPredicted RBP13.83□□□□□ -0.2
VPS16-206ENST00000466415 HERVK_113P62684 666 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 SLC39A14Q15043 492 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 LETM2Q2VYF4 491 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 TKFCQ3LXA3 575 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 USP17L6PQ6QN14 398 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 RASAL3Q86YV0 1011 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 REPS2Q8NFH8 660 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 TBCKQ8TEA7 893 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 GTF3C2Q8WUA4 911 aaPredicted RBP13.83□□□□□ -0.2
VPS16-206ENST00000466415 TRERF1Q96PN7 1200 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 NAP1L4Q99733 375 aaKnown RBP13.83□□□□□ -0.2
VPS16-206ENST00000466415 ASCC2Q9H1I8 757 aaPredicted RBP13.83□□□□□ -0.2
VPS16-206ENST00000466415 RNF146Q9NTX7 359 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 ABT1Q9ULW3 272 aaKnown RBP13.83□□□□□ -0.2
VPS16-206ENST00000466415 ADAMTS5Q9UNA0 930 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 PCDHB6Q9Y5E3 794 aa13.83□□□□□ -0.2
VPS16-206ENST00000466415 PIK3CDO00329 1044 aa13.82□□□□□ -0.2
VPS16-206ENST00000466415 MEIS2O14770 477 aa13.82□□□□□ -0.2
VPS16-206ENST00000466415 TRAK2O60296 914 aa13.82□□□□□ -0.2
VPS16-206ENST00000466415 CCNT1O60563 726 aaKnown RBP13.82□□□□□ -0.2
VPS16-206ENST00000466415 PPP6R2O75170 966 aa13.82□□□□□ -0.2
VPS16-206ENST00000466415 HOXA13P31271 388 aaPredicted RBP13.82□□□□□ -0.2
VPS16-206ENST00000466415 MCM7P33993 719 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms