RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 RRP36Q96EU6 259 aaKnown RBP6.94□□□□□ -1.3
CHMP3-206ENST00000466032 C8orf76Q96K31 380 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 C12orf42Q96LP6 360 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 GBP4Q96PP9 640 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 WRNIP1Q96S55 665 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 SLC6A16Q9GZN6 736 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 RIOX1Q9H6W3 641 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 VCPKMTQ9H867 229 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 ORC3Q9UBD5 711 aaPredicted RBP6.94□□□□□ -1.3
CHMP3-206ENST00000466032 MAD2L2Q9UI95 211 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 FEM1BQ9UK73 627 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 NMT2O60551 498 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 USP2O75604 605 aaPredicted RBP6.93□□□□□ -1.3
CHMP3-206ENST00000466032 LARGE1O95461 756 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 BRD1O95696 1058 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 BMP3P12645 472 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 PTPRAP18433 802 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 SYT1P21579 422 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 GNA11P29992 359 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 CDC27P30260 824 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 GUCY1A2P33402 732 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 ADD1P35611 737 aaKnown RBP6.93□□□□□ -1.3
CHMP3-206ENST00000466032 STAT2P52630 851 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 BACE1P56817 501 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 ATP2B2Q01814 1243 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 ZNF543Q08ER8 600 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 PLA2G4EQ3MJ16 856 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 SH3D19Q5HYK7 790 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 SLFN13Q68D06 897 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 BTNL9Q6UXG8 535 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 BRAPQ7Z569 592 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 C2orf69Q8N8R5 385 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 NECAB1Q8N987 351 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 FBXO18Q8NFZ0 1043 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 GTF3C2Q8WUA4 911 aaPredicted RBP6.93□□□□□ -1.3
CHMP3-206ENST00000466032 CDCA5Q96FF9 252 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 FEZ1Q99689 392 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 ALG1Q9BT22 464 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 SLC26A6Q9BXS9 759 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 RRAGCQ9HB90 399 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 FAM217BQ9NTX9 383 aaPredicted RBP6.93□□□□□ -1.3
CHMP3-206ENST00000466032 TMOD4Q9NZQ9 345 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 MYPNQ86TC9 1320 aa6.93□□□□□ -1.3
CHMP3-206ENST00000466032 SIPA1L1O43166 1804 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 PNMA6FA0A0J9YX94 578 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 J3QL48 77 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 SMIM22K7EJ46 135 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 CTDNEP1O95476 244 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 ZSCAN22P10073 491 aaPredicted RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 SCG2P13521 617 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 SLC4A3P48751 1232 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 FUT2Q10981 343 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 PPIL2Q13356 520 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 GNL2Q13823 731 aaKnown RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 TTLL12Q14166 644 aaPredicted RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 PFKFB3Q16875 520 aaPredicted RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 CCDC96Q2M329 555 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 LDLRAD1Q5T700 205 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 FASTKD5Q7L8L6 764 aaKnown RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 NBPF11Q86T75 865 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 PRPF38AQ8NAV1 312 aaKnown RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 PROCA1Q8NCQ7 364 aaPredicted RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 LARP6Q9BRS8 491 aaKnown RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 FOXP1Q9H334 677 aaPredicted RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 GPBP1L1Q9HC44 474 aaPredicted RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 NCOA5Q9HCD5 579 aaKnown RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 HOXC10Q9NYD6 342 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 MAP3K20Q9NYL2 800 aaKnown RBP6.92□□□□□ -1.3
CHMP3-206ENST00000466032 CFAP45Q9UL16 551 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 UTRNP46939 3433 aa6.92□□□□□ -1.3
CHMP3-206ENST00000466032 ESYT2A0FGR8 921 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 SPDYE5A6NIY4 337 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 FAM196BA6NMK8 535 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 ZBTB5O15062 677 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 BMP15O95972 392 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 NDUFB10O96000 172 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 ZBTB48P10074 688 aaPredicted RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 COPB2P35606 906 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 OAZ1P54368 228 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 ST3GAL1Q11201 340 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 IKQ13123 557 aaPredicted RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 ORC2Q13416 577 aaPredicted RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 COL9A3Q14050 684 aaPredicted RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 SIAH1Q8IUQ4 282 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 LRRC47Q8N1G4 583 aaKnown RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 SRBD1Q8N5C6 995 aaKnown RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 MB21D1Q8N884 522 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 DAGLBQ8NCG7 672 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 SPRYD3Q8NCJ5 442 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 SMC1BQ8NDV3 1235 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 MTMR8Q96EF0 704 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 SLC10A4Q96EP9 437 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 ZNF396Q96N95 335 aaPredicted RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 MYL10Q9BUA6 226 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 GLIS2Q9BZE0 524 aaPredicted RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 SCAND2PQ9GZW5 306 aaPredicted RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 ZMYND15Q9H091 742 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 GBA2Q9HCG7 927 aaPredicted RBP6.91□□□□□ -1.3
CHMP3-206ENST00000466032 C6orf50Q9HD87 102 aa6.91□□□□□ -1.3
CHMP3-206ENST00000466032 BARHL2Q9NY43 387 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms