RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 CPXCR1Q8N123 301 aa24.83■■□□□ 1.57
ITGA4-204ENST00000465522 RLFQ13129 1914 aa24.83■■□□□ 1.57
ITGA4-204ENST00000465522 HOXA7P31268 230 aaPredicted RBP24.83■■□□□ 1.57
ITGA4-204ENST00000465522 SF3A1Q15459 793 aaKnown RBP24.83■■□□□ 1.57
ITGA4-204ENST00000465522 JAKMIP3Q5VZ66 844 aa24.83■■□□□ 1.57
ITGA4-204ENST00000465522 KRT25Q7Z3Z0 450 aa24.83■■□□□ 1.57
ITGA4-204ENST00000465522 AGBL1Q96MI9 1066 aa24.83■■□□□ 1.57
ITGA4-204ENST00000465522 CCPG1Q9ULG6 757 aa24.83■■□□□ 1.57
ITGA4-204ENST00000465522 MRPL11Q9Y3B7 192 aaKnown RBP24.83■■□□□ 1.57
ITGA4-204ENST00000465522 ZNF536O15090 1300 aa24.82■■□□□ 1.56
ITGA4-204ENST00000465522 ELP1O95163 1332 aa24.82■■□□□ 1.56
ITGA4-204ENST00000465522 TAL1P17542 331 aaPredicted RBP24.82■■□□□ 1.56
ITGA4-204ENST00000465522 NASPP49321 788 aaPredicted RBP24.82■■□□□ 1.56
ITGA4-204ENST00000465522 HUNKP57058 714 aa24.82■■□□□ 1.56
ITGA4-204ENST00000465522 STK38Q15208 465 aa24.82■■□□□ 1.56
ITGA4-204ENST00000465522 WNK4Q96J92 1243 aa24.82■■□□□ 1.56
ITGA4-204ENST00000465522 RAVER2Q9HCJ3 691 aaKnown RBP24.82■■□□□ 1.56
ITGA4-204ENST00000465522 LOC285556D6RIA3 1793 aa24.82■■□□□ 1.56
ITGA4-204ENST00000465522 ABCB11O95342 1321 aa24.82■■□□□ 1.56
ITGA4-204ENST00000465522 MYPNQ86TC9 1320 aa24.82■■□□□ 1.56
ITGA4-204ENST00000465522 UBE2SQ16763 222 aa24.81■■□□□ 1.56
ITGA4-204ENST00000465522 LINC00301Q8NCQ3 95 aa24.81■■□□□ 1.56
ITGA4-204ENST00000465522 SMC1BQ8NDV3 1235 aa24.81■■□□□ 1.56
ITGA4-204ENST00000465522 TMEM260Q9NX78 707 aa24.81■■□□□ 1.56
ITGA4-204ENST00000465522 PNMA2Q9UL42 364 aa24.81■■□□□ 1.56
ITGA4-204ENST00000465522 ADAMTS5Q9UNA0 930 aa24.81■■□□□ 1.56
ITGA4-204ENST00000465522 AGTPBP1Q9UPW5 1226 aa24.81■■□□□ 1.56
ITGA4-204ENST00000465522 YEATS4O95619 227 aa24.81■■□□□ 1.56
ITGA4-204ENST00000465522 TRAPPC10P48553 1259 aa24.81■■□□□ 1.56
ITGA4-204ENST00000465522 CLK2P49760 499 aaKnown RBP24.81■■□□□ 1.56
ITGA4-204ENST00000465522 NONOQ15233 471 aaKnown RBP eCLIP24.81■■□□□ 1.56
ITGA4-204ENST00000465522 USP17L6PQ6QN14 398 aa24.81■■□□□ 1.56
ITGA4-204ENST00000465522 PCDHB6Q9Y5E3 794 aa24.81■■□□□ 1.56
ITGA4-204ENST00000465522 PASKQ96RG2 1323 aa24.8■■□□□ 1.56
ITGA4-204ENST00000465522 GADD45BO75293 160 aaPredicted RBP24.8■■□□□ 1.56
ITGA4-204ENST00000465522 SPDYE16A6NNV3 312 aaPredicted RBP24.79■■□□□ 1.56
ITGA4-204ENST00000465522 GTF2A2P52657 109 aa24.79■■□□□ 1.56
ITGA4-204ENST00000465522 IRX3P78415 501 aaPredicted RBP24.79■■□□□ 1.56
ITGA4-204ENST00000465522 PABPC4Q13310 644 aaKnown RBP eCLIP24.79■■□□□ 1.56
ITGA4-204ENST00000465522 MOGSQ13724 837 aa24.79■■□□□ 1.56
ITGA4-204ENST00000465522 SLC39A14Q15043 492 aa24.79■■□□□ 1.56
ITGA4-204ENST00000465522 INF2Q27J81 1249 aa24.79■■□□□ 1.56
ITGA4-204ENST00000465522 KCNG4Q8TDN1 519 aa24.79■■□□□ 1.56
ITGA4-204ENST00000465522 GOLGA6L4A6NEF3 574 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 MEIS2O14770 477 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 OPLAHO14841 1288 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 SPTLC2O15270 562 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 MKRN3Q13064 507 aaKnown RBP24.78■■□□□ 1.56
ITGA4-204ENST00000465522 SKOR2Q2VWA4 1001 aaPredicted RBP24.78■■□□□ 1.56
ITGA4-204ENST00000465522 TPRNQ4KMQ1 711 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 TTC38Q5R3I4 469 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 CEP131Q9UPN4 1083 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 COL11A1P12107 1806 aaPredicted RBP24.78■■□□□ 1.56
ITGA4-204ENST00000465522 TRAK2O60296 914 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 ZBTB48P10074 688 aaPredicted RBP24.78■■□□□ 1.56
ITGA4-204ENST00000465522 CETPP11597 493 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 ALAS1P13196 640 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 UBE2HP62256 183 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 SPRYD7Q5W111 196 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 MCTP2Q6DN12 878 aa24.78■■□□□ 1.56
ITGA4-204ENST00000465522 P2RX7Q99572 595 aaKnown RBP24.78■■□□□ 1.56
ITGA4-204ENST00000465522 DDX49Q9Y6V7 483 aaKnown RBP24.78■■□□□ 1.56
ITGA4-204ENST00000465522 CFBP00751 764 aa24.77■■□□□ 1.56
ITGA4-204ENST00000465522 ME1P48163 572 aa24.77■■□□□ 1.56
ITGA4-204ENST00000465522 OAZ1P54368 228 aa24.77■■□□□ 1.56
ITGA4-204ENST00000465522 PTPAQ15257 358 aa24.77■■□□□ 1.56
ITGA4-204ENST00000465522 TEX2Q8IWB9 1127 aa24.77■■□□□ 1.56
ITGA4-204ENST00000465522 REPS2Q8NFH8 660 aa24.77■■□□□ 1.56
ITGA4-204ENST00000465522 TBCKQ8TEA7 893 aa24.77■■□□□ 1.56
ITGA4-204ENST00000465522 PGBD1Q96JS3 809 aa24.77■■□□□ 1.56
ITGA4-204ENST00000465522 ASCC2Q9H1I8 757 aaPredicted RBP24.77■■□□□ 1.56
ITGA4-204ENST00000465522 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.77■■□□□ 1.56
ITGA4-204ENST00000465522 ZNF174Q15697 407 aa24.76■■□□□ 1.55
ITGA4-204ENST00000465522 GPAT2Q6NUI2 795 aa24.76■■□□□ 1.55
ITGA4-204ENST00000465522 SAPCD2Q86UD0 394 aa24.76■■□□□ 1.55
ITGA4-204ENST00000465522 MS4A4AQ96JQ5 239 aa24.76■■□□□ 1.55
ITGA4-204ENST00000465522 GCOM1H8Y6P7 765 aaPredicted RBP24.75■■□□□ 1.55
ITGA4-204ENST00000465522 PIK3CDO00329 1044 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 TOMM70O94826 608 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 FOSP01100 380 aaPredicted RBP24.75■■□□□ 1.55
ITGA4-204ENST00000465522 POLR2MP0CAP2 368 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 OSBPP22059 807 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 ZNF157P51786 506 aaPredicted RBP24.75■■□□□ 1.55
ITGA4-204ENST00000465522 AP3B2Q13367 1082 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 TMEM132BQ14DG7 1078 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 NEK8Q86SG6 692 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 JMYQ8N9B5 988 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 ZNF214Q9UL59 606 aaPredicted RBP24.75■■□□□ 1.55
ITGA4-204ENST00000465522 CCL15-CCL14A0A0B4J2E2 113 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 SPDYE3A6NKU9 549 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 WNT7AO00755 349 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 ATP2A1O14983 1001 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 MARCKSP29966 332 aaPredicted RBP24.75■■□□□ 1.55
ITGA4-204ENST00000465522 HOXA13P31271 388 aaPredicted RBP24.75■■□□□ 1.55
ITGA4-204ENST00000465522 CCL15Q16663 113 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 MB21D1Q8N884 522 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 TBC1D5Q92609 795 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 TRERF1Q96PN7 1200 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 HOMER2Q9NSB8 354 aa24.75■■□□□ 1.55
ITGA4-204ENST00000465522 PPP6R2O75170 966 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms