RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TROAPQ12815 778 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 ANKRD18AQ8IVF6 992 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 C4orf32Q8N8J7 132 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 GIMAP8Q8ND71 665 aaPredicted RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 TRIM47Q96LD4 638 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 GDAP1L1Q96MZ0 367 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 ERGIC2Q96RQ1 377 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 SH2D4AQ9H788 454 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 MAGEF1Q9HAY2 307 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 JADE2Q9NQC1 790 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 DISC1Q9NRI5 854 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 HYOU1Q9Y4L1 999 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 DCCP43146 1447 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 BICDL2A1A5D9 508 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 SRRM3A6NNA2 597 aaPredicted RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 B4DLN1 442 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 HSF2BPO75031 334 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 LCA5LO95447 670 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 FGRP09769 529 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 TRIM21P19474 475 aaKnown RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 HNRNPH1P31943 449 aaKnown RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 LIG3P49916 1009 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 PMS1P54277 932 aaKnown RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 SPA17Q15506 151 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 GLE1Q53GS7 698 aaKnown RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 IFIT1BQ5T764 474 aaKnown RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 EMC10Q5UCC4 262 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 TMED8Q6PL24 325 aaPredicted RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 ZSCAN29Q8IWY8 852 aaPredicted RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 SYNE4Q8N205 404 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 PRPF38AQ8NAV1 312 aaKnown RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 C1orf131Q8NDD1 294 aaKnown RBP8.14□□□□□ -1.11
USP48-206ENST00000464577 SPATA4Q8NEY3 305 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 TUBGCP2Q9BSJ2 902 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 TFR2Q9UP52 801 aa8.14□□□□□ -1.11
USP48-206ENST00000464577 FSBPO95073 299 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 STARD3NLO95772 234 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 SCG2P13521 617 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 CALML3P27482 149 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 NAALADL2Q58DX5 795 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 TTMPQ5BVD1 217 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 HAUS3Q68CZ6 603 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 KCNV1Q6PIU1 500 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 KDM7AQ6ZMT4 941 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.13□□□□□ -1.11
USP48-206ENST00000464577 PIK3AP1Q6ZUJ8 805 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 YTHDF3Q7Z739 585 aaKnown RBP8.13□□□□□ -1.11
USP48-206ENST00000464577 RPAINQ86UA6 219 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 RRP36Q96EU6 259 aaKnown RBP8.13□□□□□ -1.11
USP48-206ENST00000464577 ALS2CR12Q96Q35 445 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 RUFY1Q96T51 708 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 DUSP9Q99956 384 aaKnown RBP8.13□□□□□ -1.11
USP48-206ENST00000464577 LRRC1Q9BTT6 524 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 CUEDC2Q9H467 287 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 A1CFQ9NQ94 594 aaKnown RBP8.13□□□□□ -1.11
USP48-206ENST00000464577 AGPAT5Q9NUQ2 364 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 KBTBD4Q9NVX7 518 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 STIM2Q9P246 746 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 MAPK8IP1Q9UQF2 711 aa8.13□□□□□ -1.11
USP48-206ENST00000464577 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.13□□□□□ -1.11
USP48-206ENST00000464577 MACROD2A1Z1Q3 448 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 PES1O00541 588 aaKnown RBP8.12□□□□□ -1.11
USP48-206ENST00000464577 GPTP24298 496 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 CCNE1P24864 410 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 MCM7P33993 719 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 NLRP5P59047 1200 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 TBC1D8BQ0IIM8 1120 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 HLFQ16534 295 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 PFKFB3Q16875 520 aaPredicted RBP8.12□□□□□ -1.11
USP48-206ENST00000464577 COBLL1Q53SF7 1204 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 MICALCLQ6ZW33 695 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 PROSER2Q86WR7 435 aaPredicted RBP8.12□□□□□ -1.11
USP48-206ENST00000464577 IQCA1Q86XH1 822 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 CD302Q8IX05 232 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 DNAJC10Q8IXB1 793 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 MREGQ8N565 214 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 CSGALNACT2Q8N6G5 542 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 P2RX5Q93086 422 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 CCDC42Q96M95 316 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 OSBPL9Q96SU4 736 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 BRIP1Q9BX63 1249 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 CCSER1Q9C0I3 900 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 RNF14Q9UBS8 474 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 LRWD1Q9UFC0 647 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 DMGDHQ9UI17 866 aaKnown RBP8.12□□□□□ -1.11
USP48-206ENST00000464577 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 GGA2Q9UJY4 613 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 ZNF330Q9Y3S2 320 aaPredicted RBP8.12□□□□□ -1.11
USP48-206ENST00000464577 MAGEB6P1A0A0J9YX57 407 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 hCG_1642624A0A1W2PR95 340 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 MINDY4BA8MYZ0 360 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 ZNF263O14978 683 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 PJA2O43164 708 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 FNTAP49354 379 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 EZH2Q15910 746 aaKnown RBP8.12□□□□□ -1.11
USP48-206ENST00000464577 CCDC96Q2M329 555 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 FKBP15Q5T1M5 1219 aa8.12□□□□□ -1.11
USP48-206ENST00000464577 SRBD1Q8N5C6 995 aaKnown RBP8.12□□□□□ -1.11
USP48-206ENST00000464577 TSEN2Q8NCE0 465 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 233 ms