RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 TMA7Q9Y2S6 64 aaKnown RBP6.34□□□□□ -1.39
USP9X-204ENST00000463829 C2orf71A6NGG8 1288 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 FKTNO75072 461 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 GSTM1P09488 218 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 FAM153BP0C7A2 387 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 FGFR1P11362 822 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 GRIA2P42262 883 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 SH3TC2Q8TF17 1288 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 RNPC3Q96LT9 517 aaKnown RBP6.33□□□□□ -1.4
USP9X-204ENST00000463829 IPO9Q96P70 1041 aaKnown RBP6.33□□□□□ -1.4
USP9X-204ENST00000463829 SLC26A8Q96RN1 970 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 CDC6Q99741 560 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 MCMBPQ9BTE3 642 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 CDADC1Q9BWV3 514 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 ZNF281Q9Y2X9 895 aa6.33□□□□□ -1.4
USP9X-204ENST00000463829 TMEM82A0PJX8 343 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 STXBP3O00186 592 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 CPP00450 1065 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 IFNGR1P15260 489 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 RAP1GAPP47736 663 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 SEPHS1P49903 392 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 RTP2Q5QGT7 225 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 EEF1DP3Q658K8 133 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 RCSD1Q6JBY9 416 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 WAPLQ7Z5K2 1190 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 JAZF1Q86VZ6 243 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 SCUBE1Q8IWY4 988 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 ZSWIM2Q8NEG5 633 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 CCDC120Q96HB5 630 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 TOX2Q96NM4 488 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 ALPK1Q96QP1 1244 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 PPP1R16BQ96T49 567 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 IER2Q9BTL4 223 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 AP5S1Q9NUS5 200 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 CTNND2Q9UQB3 1225 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 TBX22Q9Y458 520 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 BACE2Q9Y5Z0 518 aa6.32□□□□□ -1.4
USP9X-204ENST00000463829 MRPL42Q9Y6G3 142 aaKnown RBP6.32□□□□□ -1.4
USP9X-204ENST00000463829 CCDC163A0A0D9SF12 145 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 PRODHO43272 600 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 SCG5P05408 212 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 SNRPB2P08579 225 aaKnown RBP6.31□□□□□ -1.4
USP9X-204ENST00000463829 PABPC1P11940 636 aaKnown RBP6.31□□□□□ -1.4
USP9X-204ENST00000463829 KCNJ6P48051 423 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 GFRA1P56159 465 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 MESP2Q0VG99 397 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 SCRN1Q12765 414 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 DUSP4Q13115 394 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 MPZL3Q6UWV2 235 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 NSMFQ6X4W1 530 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 ZSCAN18Q8TBC5 510 aaPredicted RBP6.31□□□□□ -1.4
USP9X-204ENST00000463829 KCTD13Q8WZ19 329 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 COPS5Q92905 334 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 ADAMTS10Q9H324 1103 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 SLAMF8Q9P0V8 285 aa6.31□□□□□ -1.4
USP9X-204ENST00000463829 SHROOM4Q9ULL8 1493 aa6.3□□□□□ -1.4
USP9X-204ENST00000463829 FGF10O15520 208 aaPredicted RBP6.3□□□□□ -1.4
USP9X-204ENST00000463829 ECI1P42126 302 aa6.3□□□□□ -1.4
USP9X-204ENST00000463829 MAP4K2Q12851 820 aa6.3□□□□□ -1.4
USP9X-204ENST00000463829 SF1Q15637 639 aaKnown RBP6.3□□□□□ -1.4
USP9X-204ENST00000463829 TMEM67Q5HYA8 995 aa6.3□□□□□ -1.4
USP9X-204ENST00000463829 YOD1Q5VVQ6 348 aaPredicted RBP6.3□□□□□ -1.4
USP9X-204ENST00000463829 FOXB2Q5VYV0 432 aa6.3□□□□□ -1.4
USP9X-204ENST00000463829 ZPBP2Q6X784 338 aa6.3□□□□□ -1.4
USP9X-204ENST00000463829 NAT16Q8N8M0 369 aa6.3□□□□□ -1.4
USP9X-204ENST00000463829 KIRREL1Q96J84 757 aa6.3□□□□□ -1.4
USP9X-204ENST00000463829 FCRL2Q96LA5 508 aaPredicted RBP6.3□□□□□ -1.4
USP9X-204ENST00000463829 TMEM59LQ9UK28 342 aa6.3□□□□□ -1.4
USP9X-204ENST00000463829 PTCH2Q9Y6C5 1203 aa6.3□□□□□ -1.4
USP9X-204ENST00000463829 DNAJC25-GNG10A0A024R161 153 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 TRBV23OR9-2A0A075B6M9 112 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 TRBV23-1A0A0A0MS06 115 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 ZNF503-AS2A6NEH8 195 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 SMARCA5O60264 1052 aaPredicted RBP6.29□□□□□ -1.4
USP9X-204ENST00000463829 DLX3O60479 287 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 TBC1D8O95759 1140 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 THBDP07204 575 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 GLI1P08151 1106 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 SQSTM1Q13501 440 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 RALGPS1Q5JS13 557 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 FAM209AQ5JX71 171 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 CYP2R1Q6VVX0 501 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 TMEM145Q8NBT3 493 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 LINC01599Q8WXQ3 324 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 OSBP2Q969R2 916 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 LIN37Q96GY3 246 aaPredicted RBP6.29□□□□□ -1.4
USP9X-204ENST00000463829 PTCHD1Q96NR3 888 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 DHRS4Q9BTZ2 278 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 KANSL2Q9H9L4 492 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 GPRC5CQ9NQ84 441 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 TMEM260Q9NX78 707 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.29□□□□□ -1.4
USP9X-204ENST00000463829 TNFRSF10DQ9UBN6 386 aa6.29□□□□□ -1.4
USP9X-204ENST00000463829 ZGLP1P0C6A0 271 aa6.28□□□□□ -1.4
USP9X-204ENST00000463829 PAMP19021 973 aa6.28□□□□□ -1.4
USP9X-204ENST00000463829 L1CAMP32004 1257 aa6.28□□□□□ -1.4
USP9X-204ENST00000463829 SLC35F1Q5T1Q4 408 aa6.28□□□□□ -1.4
USP9X-204ENST00000463829 HLA-DQA1Q5Y7H0 255 aa6.28□□□□□ -1.4
USP9X-204ENST00000463829 IQCEQ6IPM2 695 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms