RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 ATG4CQ96DT6 458 aa22.75■■□□□ 1.23
PTPN18-207ENST00000462321 ABCB11O95342 1321 aa22.75■■□□□ 1.23
PTPN18-207ENST00000462321 TCHHQ07283 1943 aa22.74■■□□□ 1.23
PTPN18-207ENST00000462321 HOXA7P31268 230 aaPredicted RBP22.74■■□□□ 1.23
PTPN18-207ENST00000462321 SNAPC2Q13487 334 aa22.74■■□□□ 1.23
PTPN18-207ENST00000462321 SF3A1Q15459 793 aaKnown RBP22.74■■□□□ 1.23
PTPN18-207ENST00000462321 FASTKD5Q7L8L6 764 aaKnown RBP22.74■■□□□ 1.23
PTPN18-207ENST00000462321 KCNG4Q8TDN1 519 aa22.74■■□□□ 1.23
PTPN18-207ENST00000462321 ADAMTS5Q9UNA0 930 aa22.74■■□□□ 1.23
PTPN18-207ENST00000462321 MRPL11Q9Y3B7 192 aaKnown RBP22.74■■□□□ 1.23
PTPN18-207ENST00000462321 CTDP1Q9Y5B0 961 aaPredicted RBP22.74■■□□□ 1.23
PTPN18-207ENST00000462321 KIF3CO14782 793 aa22.74■■□□□ 1.23
PTPN18-207ENST00000462321 STK38Q15208 465 aa22.74■■□□□ 1.23
PTPN18-207ENST00000462321 WNK4Q96J92 1243 aa22.74■■□□□ 1.23
PTPN18-207ENST00000462321 HOXC10Q9NYD6 342 aa22.74■■□□□ 1.23
PTPN18-207ENST00000462321 BIN2Q9UBW5 565 aaPredicted RBP22.74■■□□□ 1.23
PTPN18-207ENST00000462321 CCPG1Q9ULG6 757 aa22.74■■□□□ 1.23
PTPN18-207ENST00000462321 AGTPBP1Q9UPW5 1226 aa22.74■■□□□ 1.23
PTPN18-207ENST00000462321 PARP14Q460N5 1801 aa22.73■■□□□ 1.23
PTPN18-207ENST00000462321 TAL1P17542 331 aaPredicted RBP22.73■■□□□ 1.23
PTPN18-207ENST00000462321 UBE2HP62256 183 aa22.73■■□□□ 1.23
PTPN18-207ENST00000462321 NONOQ15233 471 aaKnown RBP eCLIP22.73■■□□□ 1.23
PTPN18-207ENST00000462321 SKOR2Q2VWA4 1001 aaPredicted RBP22.73■■□□□ 1.23
PTPN18-207ENST00000462321 PASKQ96RG2 1323 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 SPDYE16A6NNV3 312 aaPredicted RBP22.72■■□□□ 1.23
PTPN18-207ENST00000462321 OAZ1P54368 228 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 MOGSQ13724 837 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 SLC39A14Q15043 492 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 PTPAQ15257 358 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 UBE2SQ16763 222 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 JAKMIP3Q5VZ66 844 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 MCTP2Q6DN12 878 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 REPS2Q8NFH8 660 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 TMEM260Q9NX78 707 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 CEP131Q9UPN4 1083 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 PCDHB6Q9Y5E3 794 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 RLFQ13129 1914 aa22.72■■□□□ 1.23
PTPN18-207ENST00000462321 OPLAHO14841 1288 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 SPTLC2O15270 562 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 GADD45BO75293 160 aaPredicted RBP22.71■■□□□ 1.23
PTPN18-207ENST00000462321 TTC38Q5R3I4 469 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 AGBL1Q96MI9 1066 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.71■■□□□ 1.23
PTPN18-207ENST00000462321 PIK3CDO00329 1044 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 MEIS2O14770 477 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 TRAK2O60296 914 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 BMP15O95972 392 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 MBD3O95983 291 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 ATP2B1P20020 1258 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 AP3B2Q13367 1082 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 INF2Q27J81 1249 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 CPXCR1Q8N123 301 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 SMC1BQ8NDV3 1235 aa22.71■■□□□ 1.23
PTPN18-207ENST00000462321 RAVER2Q9HCJ3 691 aaKnown RBP22.71■■□□□ 1.23
PTPN18-207ENST00000462321 MORC2Q9Y6X9 1032 aaPredicted RBP22.71■■□□□ 1.23
PTPN18-207ENST00000462321 TRPM7Q96QT4 1865 aa22.7■■□□□ 1.22
PTPN18-207ENST00000462321 ATP2A1O14983 1001 aa22.7■■□□□ 1.22
PTPN18-207ENST00000462321 ZBTB48P10074 688 aaPredicted RBP22.7■■□□□ 1.22
PTPN18-207ENST00000462321 GTF2A2P52657 109 aa22.7■■□□□ 1.22
PTPN18-207ENST00000462321 PABPC4Q13310 644 aaKnown RBP eCLIP22.7■■□□□ 1.223e-6■■■■□ 26.6
PTPN18-207ENST00000462321 USP17L6PQ6QN14 398 aa22.7■■□□□ 1.22
PTPN18-207ENST00000462321 JMYQ8N9B5 988 aa22.7■■□□□ 1.22
PTPN18-207ENST00000462321 DDX49Q9Y6V7 483 aaKnown RBP22.7■■□□□ 1.22
PTPN18-207ENST00000462321 PPP6R2O75170 966 aa22.69■■□□□ 1.22
PTPN18-207ENST00000462321 ME1P48163 572 aa22.69■■□□□ 1.22
PTPN18-207ENST00000462321 HUNKP57058 714 aa22.69■■□□□ 1.22
PTPN18-207ENST00000462321 IRX3P78415 501 aaPredicted RBP22.69■■□□□ 1.22
PTPN18-207ENST00000462321 KLHL40Q2TBA0 621 aa22.69■■□□□ 1.22
PTPN18-207ENST00000462321 WNT7AO00755 349 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 CETPP11597 493 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 SPRYD7Q5W111 196 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 GPAT2Q6NUI2 795 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 LBX2Q6XYB7 198 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 NEK8Q86SG6 692 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 TBCKQ8TEA7 893 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 PGBD1Q96JS3 809 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 ZNF214Q9UL59 606 aaPredicted RBP22.68■■□□□ 1.22
PTPN18-207ENST00000462321 GOLGA6L4A6NEF3 574 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 FOSP01100 380 aaPredicted RBP22.68■■□□□ 1.22
PTPN18-207ENST00000462321 MB21D1Q8N884 522 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 GPT2Q8TD30 523 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 MS4A4AQ96JQ5 239 aa22.68■■□□□ 1.22
PTPN18-207ENST00000462321 GCOM1H8Y6P7 765 aaPredicted RBP22.67■■□□□ 1.22
PTPN18-207ENST00000462321 POLR2MP0CAP2 368 aa22.67■■□□□ 1.22
PTPN18-207ENST00000462321 ALAS1P13196 640 aa22.67■■□□□ 1.22
PTPN18-207ENST00000462321 TMEM132BQ14DG7 1078 aa22.67■■□□□ 1.22
PTPN18-207ENST00000462321 CLEC4DQ8WXI8 215 aa22.67■■□□□ 1.22
PTPN18-207ENST00000462321 TEX13BQ9BXU2 312 aa22.67■■□□□ 1.22
PTPN18-207ENST00000462321 ANO3Q9BYT9 981 aa22.67■■□□□ 1.22
PTPN18-207ENST00000462321 ASCC2Q9H1I8 757 aaPredicted RBP22.67■■□□□ 1.22
PTPN18-207ENST00000462321 PCDHA7Q9UN72 937 aa22.67■■□□□ 1.22
PTPN18-207ENST00000462321 SPDYE3A6NKU9 549 aa22.66■■□□□ 1.22
PTPN18-207ENST00000462321 OSBPP22059 807 aa22.66■■□□□ 1.22
PTPN18-207ENST00000462321 GHRHRQ02643 423 aa22.66■■□□□ 1.22
PTPN18-207ENST00000462321 ORC2Q13416 577 aaPredicted RBP22.66■■□□□ 1.22
PTPN18-207ENST00000462321 ZNF174Q15697 407 aa22.66■■□□□ 1.22
PTPN18-207ENST00000462321 MCF2L2Q86YR7 1114 aa22.66■■□□□ 1.22
PTPN18-207ENST00000462321 A0A0G2JMZ2 1700 aa22.66■■□□□ 1.22
PTPN18-207ENST00000462321 CFBP00751 764 aa22.65■■□□□ 1.22
PTPN18-207ENST00000462321 MARCKSP29966 332 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms