RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 MYH2Q9UKX2 1941 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 BAZ2BQ9UIF8 2168 aaKnown RBP4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 IGKV6D-41A0A0C4DH26 115 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 SHTN1A0MZ66 631 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 FSD2A1L4K1 749 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 TULP1O00294 542 aaPredicted RBP4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 WDR46O15213 610 aaKnown RBP4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 TBC1D12O60347 775 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 EPS15P42566 896 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 ECE1P42892 770 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 IRX3P78415 501 aaPredicted RBP4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 AP3B2Q13367 1082 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 POSTNQ15063 836 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 RESP18Q5W5W9 173 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 MCF2L2Q86YR7 1114 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 ZNF579Q8NAF0 562 aaKnown RBP4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 SYMPKQ92797 1274 aaKnown RBP4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 TIGD1Q96MW7 591 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 SLF1Q9BQI6 1058 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 ANO3Q9BYT9 981 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 LRRC27Q9C0I9 530 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 DNAJC18Q9H819 358 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 KIAA1468Q9P260 1216 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 DDX25Q9UHL0 483 aaKnown RBP4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 SERTAD1Q9UHV2 236 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 PRR12Q9ULL5 1215 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 MAST2Q6P0Q8 1798 aa4.65□□□□□ -1.66
ATP13A3-206ENST00000461660 BAZ2AQ9UIF9 1905 aaKnown RBP4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 TIAM2Q8IVF5 1701 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 SERPINC1P01008 464 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 IDEP14735 1019 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 INPP5BP32019 993 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 ASIC1P78348 528 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 ATP2C1P98194 919 aaPredicted RBP4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 ORC2Q13416 577 aaPredicted RBP4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 MTMR2Q13614 643 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 ARMC9Q7Z3E5 817 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 CABP7Q86V35 215 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 SCYL3Q8IZE3 742 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 FMR1NBQ8N0W7 255 aaPredicted RBP4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 PRPF38AQ8NAV1 312 aaKnown RBP4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 SNX29Q8TEQ0 813 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 PLIN2Q99541 437 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 GOLPH3LQ9H4A5 285 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 RIC8AQ9NPQ8 531 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 TMEM260Q9NX78 707 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 FBXO2Q9UK22 296 aaPredicted RBP4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 PCDHA6Q9UN73 950 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 PCDHA8Q9Y5H6 950 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 ANKRD31Q8N7Z5 1873 aa4.65□□□□□ -1.67
ATP13A3-206ENST00000461660 DOCK2Q92608 1830 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 USP17L15C9J2P7 530 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 USP17L13C9JLJ4 530 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 USP17L11C9JVI0 530 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 USP17L18D6R9N7 530 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 USP17L22D6RA61 530 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 USP17L17D6RBQ6 530 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 USP17L19D6RCP7 530 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 USP17L20D6RJB6 530 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 USP17L24Q0WX57 530 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 PTPAQ15257 358 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 PRR16Q569H4 304 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 HAUS3Q68CZ6 603 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 USP17L6PQ6QN14 398 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 GADL1Q6ZQY3 521 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 AOPEPQ8N6M6 819 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 ZNF280CQ8ND82 737 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 TRPM4Q8TD43 1214 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 ERCC4Q92889 916 aaPredicted RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 AK8Q96MA6 479 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 EXOC1Q9NV70 894 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 CBFA2T2O43439 604 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 TPM1P09493 284 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 SNHG28P0DPA3 235 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 FDX1P10109 184 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 HOXA13P31271 388 aaPredicted RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 CCT6AP40227 531 aaKnown RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 TECP42680 631 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 TOB1P50616 345 aaPredicted RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 PABPC4Q13310 644 aaKnown RBP eCLIP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 SHROOM1Q2M3G4 852 aaPredicted RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 FILIP1LQ4L180 1135 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 DNTTIP2Q5QJE6 756 aaKnown RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 AXDND1Q5T1B0 1012 aaPredicted RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 SHC4Q6S5L8 630 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 LUZP1Q86V48 1076 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 SGIP1Q9BQI5 828 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 RPAP3Q9H6T3 665 aaPredicted RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 MAGEC2Q9UBF1 373 aaPredicted RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 PCDHA12Q9UN75 941 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 ABCB11O95342 1321 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 COL11A2P13942 1736 aaPredicted RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 ADCY5O95622 1261 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 SLFN14P0C7P3 912 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 VEGFAP15692 232 aaPredicted RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 EPHX2P34913 555 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 HMGCS2P54868 508 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 NLRP12P59046 1061 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 MAP3K9P80192 1104 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 ARHGAP4P98171 946 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms