RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-206ENST00000461574 U2AF1L4Q8WU68 220 aaKnown RBP6.36□□□□□ -1.39
BRCA1-206ENST00000461574 PNMA5Q96PV4 448 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 SSBP4Q9BWG4 385 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-206ENST00000461574 PLA2G12BQ9BX93 195 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 RBM19Q9Y4C8 960 aaKnown RBP6.36□□□□□ -1.39
BRCA1-206ENST00000461574 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-206ENST00000461574 SNCAIPQ9Y6H5 919 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 ALPK3Q96L96 1907 aa6.36□□□□□ -1.39
BRCA1-206ENST00000461574 FAM205AQ6ZU69 1335 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 IRS2Q9Y4H2 1338 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 DOCK2Q92608 1830 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 SOX1O00570 391 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-206ENST00000461574 APAF1O14727 1248 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 LGR5O75473 907 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 RGS9O75916 674 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-206ENST00000461574 CSF1RP07333 972 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 ZNF853P0CG23 659 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 GRNP28799 593 aaKnown RBP6.35□□□□□ -1.39
BRCA1-206ENST00000461574 HIBADHP31937 336 aaKnown RBP6.35□□□□□ -1.39
BRCA1-206ENST00000461574 GYG1P46976 350 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 PRKCZQ05513 592 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 PPATQ06203 517 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 CHAF1AQ13111 956 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-206ENST00000461574 CCINQ13939 588 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 LRP8Q14114 963 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 HIF1AQ16665 826 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 TWISTNBQ3B726 338 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-206ENST00000461574 C17orf99Q6UX52 265 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 ANKRD23Q86SG2 305 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 DEFB123Q8N688 67 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 TSPYL6Q8N831 410 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 LINS1Q8NG48 757 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 TSR2Q969E8 191 aaKnown RBP6.35□□□□□ -1.39
BRCA1-206ENST00000461574 TEKT1Q969V4 418 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 TEPSINQ96N21 525 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 PARK7Q99497 189 aaKnown RBP6.35□□□□□ -1.39
BRCA1-206ENST00000461574 ZNF341Q9BYN7 854 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 STAP2Q9UGK3 403 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 DMGDHQ9UI17 866 aaKnown RBP6.35□□□□□ -1.39
BRCA1-206ENST00000461574 EYSQ5T1H1 3165 aa6.35□□□□□ -1.39
BRCA1-206ENST00000461574 MAST3O60307 1309 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 HYAL3O43820 417 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-206ENST00000461574 ADCY3O60266 1144 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 SGPL1O95470 568 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 RASA1P20936 1047 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 CTGFP29279 349 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 FLIIQ13045 1269 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 RTN1Q16799 776 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 CAVIN4Q5BKX8 364 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 IER5Q5VY09 327 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 LMBR1LQ6UX01 489 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 G2E3Q7L622 706 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 FAM83AQ86UY5 434 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 FAM35AQ86V20 835 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 KRTAP1-3Q8IUG1 177 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 C7orf61Q8IZ16 206 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 TDRD7Q8NHU6 1098 aaKnown RBP6.34□□□□□ -1.39
BRCA1-206ENST00000461574 TBC1D22AQ8WUA7 517 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 DNAAF4Q8WXU2 420 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 DEFB118Q96PH6 123 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 PRO3102Q9H379 93 aa6.34□□□□□ -1.39
BRCA1-206ENST00000461574 DDX60LQ5H9U9 1706 aaKnown RBP6.33□□□□□ -1.4
BRCA1-206ENST00000461574 ADGRA2Q96PE1 1338 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 DOCK1Q14185 1865 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 TGFBR3LH3BV60 316 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 TNPO2O14787 897 aaKnown RBP6.33□□□□□ -1.4
BRCA1-206ENST00000461574 CYP2C8P10632 490 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 CPB1P15086 417 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 INPP5BP32019 993 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 ZEB1P37275 1124 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-206ENST00000461574 CASP7P55210 303 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 SEC13P55735 322 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 PLAURQ03405 335 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 UBE4AQ14139 1066 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 GRIK5Q16478 980 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 Q7L0L9 218 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 MIGA2Q7L4E1 593 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 NECAB2Q7Z6G3 386 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 UBE2Q1Q7Z7E8 422 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 SMCR8Q8TEV9 937 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-206ENST00000461574 PAWRQ96IZ0 340 aaKnown RBP6.33□□□□□ -1.4
BRCA1-206ENST00000461574 LPIN3Q9BQK8 851 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 ZMYND8Q9ULU4 1186 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-206ENST00000461574 PRUNE2Q8WUY3 3088 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 PTPRFP10586 1907 aa6.33□□□□□ -1.4
BRCA1-206ENST00000461574 RPAP1Q9BWH6 1393 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-206ENST00000461574 ZBTB42B2RXF5 422 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 CAPN2P17655 700 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 FLT3LGP49771 235 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 FOXO4P98177 505 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 HDLBPQ00341 1268 aaKnown RBP6.32□□□□□ -1.4
BRCA1-206ENST00000461574 TCP10Q12799 353 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 GADL1Q6ZQY3 521 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 COA7Q96BR5 231 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 ZDHHC15Q96MV8 337 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 HINFPQ9BQA5 517 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 C9orf78Q9NZ63 289 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-206ENST00000461574 ZFATQ9P243 1243 aa6.32□□□□□ -1.4
BRCA1-206ENST00000461574 TFIP11Q9UBB9 837 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms