RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 PDHBP11177 359 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 MAP3K9P80192 1104 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 ORC2Q13416 577 aaPredicted RBP20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 LETM2Q2VYF4 491 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 SOGA3Q5TF21 947 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 CABP7Q86V35 215 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 ANKRD20A12PQ8NF67 263 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 RASSF8Q8NHQ8 419 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 PLIN2Q99541 437 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 UBA5Q9GZZ9 404 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 hCG_1984214I3L0E3 225 aa20.67■□□□□ 0.9
SEMA3B-209ENST00000456560 ZNF713Q8N859 430 aaPredicted RBP20.67■□□□□ 0.9
SEMA3B-209ENST00000456560 ATP6V0A2Q9Y487 856 aa20.67■□□□□ 0.9
SEMA3B-209ENST00000456560 TADA3O75528 432 aa20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 PLCG1P19174 1290 aa20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 PMS1P54277 932 aaKnown RBP20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 TERF2Q15554 542 aa20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 FAM53CQ9NYF3 392 aa20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 TRIM49BA6NDI0 452 aa20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 RNF225M0QZC1 329 aaPredicted RBP20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 SNHG28P0DPA3 235 aa20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 SF3B2Q13435 895 aaKnown RBP20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 CERS5Q8N5B7 392 aa20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 TBCKQ8TEA7 893 aa20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 QSER1Q2KHR3 1735 aa20.66■□□□□ 0.9
SEMA3B-209ENST00000456560 RIMBP2O15034 1052 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 TPM1P09493 284 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 AKR1B1P15121 316 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 TRIM14Q14142 442 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 COL23A1Q86Y22 540 aaPredicted RBP20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 CARD6Q9BX69 1037 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 DDX4Q9NQI0 724 aaKnown RBP20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 BIN2Q9UBW5 565 aaPredicted RBP20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 ANKRD31Q8N7Z5 1873 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 PICALMQ13492 652 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 ASPRV1Q53RT3 343 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 TAF3Q5VWG9 929 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 JAKMIP3Q5VZ66 844 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 REXO1Q8N1G1 1221 aaKnown RBP20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 C7orf25Q9BPX7 421 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 MMTAG2Q9BU76 263 aaKnown RBP20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 THAP9Q9H5L6 903 aa20.65■□□□□ 0.9
SEMA3B-209ENST00000456560 EEF1GP26641 437 aaKnown RBP20.64■□□□□ 0.89
SEMA3B-209ENST00000456560 TMTC1Q8IUR5 882 aa20.64■□□□□ 0.89
SEMA3B-209ENST00000456560 MNS1Q8NEH6 495 aa20.64■□□□□ 0.89
SEMA3B-209ENST00000456560 ABHD10Q9NUJ1 306 aa20.64■□□□□ 0.89
SEMA3B-209ENST00000456560 TMEM260Q9NX78 707 aa20.64■□□□□ 0.89
SEMA3B-209ENST00000456560 MRFAP1Q9Y605 127 aa20.64■□□□□ 0.89
SEMA3B-209ENST00000456560 FRMPD2Q68DX3 1309 aaPredicted RBP20.64■□□□□ 0.89
SEMA3B-209ENST00000456560 EFCAB8A8MWE9 144 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 STIM1Q13586 685 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 ARHGAP29Q52LW3 1261 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 TTI2Q6NXR4 508 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 DHTKD1Q96HY7 919 aaPredicted RBP20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 TRIM9Q9C026 710 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 ZNF446Q9NWS9 450 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 PSMA7O14818 248 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 EDIL3O43854 480 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 DPP8Q6V1X1 898 aaPredicted RBP20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 ZNF507Q8TCN5 953 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 UBXN4Q92575 508 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 MTMR9Q96QG7 549 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 C10orf71Q711Q0 1435 aa20.63■□□□□ 0.89
SEMA3B-209ENST00000456560 A0A0U1RQJ8 604 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 TECP42680 631 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 ERVK-24P63145 666 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 UBXN1Q04323 297 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 LRRC47Q8N1G4 583 aaKnown RBP20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 MB21D1Q8N884 522 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 NOC3LQ8WTT2 800 aaKnown RBP20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 ATRIPQ8WXE1 791 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 MYO3BQ8WXR4 1341 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 LGALS16A8MUM7 142 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 BAG6P46379 1132 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 POTEDQ86YR6 584 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 COA7Q96BR5 231 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 DUSP9Q99956 384 aaKnown RBP20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 IRX2Q9BZI1 471 aaPredicted RBP20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 SWAP70Q9UH65 585 aa20.62■□□□□ 0.89
SEMA3B-209ENST00000456560 MYH8P13535 1937 aa20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 A0A1W2PQC6 194 aa20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 F8W031 263 aaPredicted RBP20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 NUP88Q99567 741 aaPredicted RBP20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 ZC3H12CQ9C0D7 883 aaKnown RBP20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 LZTFL1Q9NQ48 299 aa20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 USP40Q9NVE5 1235 aa20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 TTF2Q9UNY4 1162 aaKnown RBP20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 SRGNP10124 158 aa20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 ADCY7P51828 1080 aa20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 CYP26C1Q6V0L0 522 aa20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 CREBRFQ8IUR6 639 aa20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 TRIM47Q96LD4 638 aa20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 SERPINB13Q9UIV8 391 aa20.61■□□□□ 0.89
SEMA3B-209ENST00000456560 TTLL1O95922 423 aa20.6■□□□□ 0.89
SEMA3B-209ENST00000456560 SHMT1P34896 483 aa20.6■□□□□ 0.89
SEMA3B-209ENST00000456560 FXR2P51116 673 aaKnown RBP eCLIP20.6■□□□□ 0.89
SEMA3B-209ENST00000456560 ZNF543Q08ER8 600 aa20.6■□□□□ 0.89
SEMA3B-209ENST00000456560 BMS1Q14692 1282 aaKnown RBP20.6■□□□□ 0.89
SEMA3B-209ENST00000456560 MSL1Q68DK7 614 aa20.6■□□□□ 0.89
SEMA3B-209ENST00000456560 CLEC10AQ8IUN9 316 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms