RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 VTI1AQ96AJ9 217 aa15.24■□□□□ 0.03
TREX1-203ENST00000456089 GUCD1Q96NT3 240 aa15.24■□□□□ 0.03
TREX1-203ENST00000456089 TMEM47Q9BQJ4 181 aa15.24■□□□□ 0.03
TREX1-203ENST00000456089 TSEN34Q9BSV6 310 aaKnown RBP15.24■□□□□ 0.03
TREX1-203ENST00000456089 TMEM39AQ9NV64 488 aa15.24■□□□□ 0.03
TREX1-203ENST00000456089 CCPG1Q9ULG6 757 aa15.24■□□□□ 0.03
TREX1-203ENST00000456089 GBF1Q92538 1859 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 CTAGE5O15320 804 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 FGRP09769 529 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 FDX1P10109 184 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 PDE4AP27815 886 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 GNASQ5JWF2 1037 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 TTC22Q5TAA0 569 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 NOL8Q76FK4 1167 aaKnown RBP15.23■□□□□ 0.03
TREX1-203ENST00000456089 TBC1D10CQ8IV04 446 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 NUP133Q8WUM0 1156 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 UPF3AQ9H1J1 476 aaKnown RBP15.23■□□□□ 0.03
TREX1-203ENST00000456089 PDGFCQ9NRA1 345 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 STXBP5LQ9Y2K9 1186 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 EYSQ5T1H1 3165 aa15.23■□□□□ 0.03
TREX1-203ENST00000456089 MOXD2PA6NHM9 499 aa15.22■□□□□ 0.03
TREX1-203ENST00000456089 KIAA0355O15063 1070 aa15.22■□□□□ 0.03
TREX1-203ENST00000456089 PLA2G6O60733 806 aa15.22■□□□□ 0.03
TREX1-203ENST00000456089 NEFLP07196 543 aa15.22■□□□□ 0.03
TREX1-203ENST00000456089 NOVP48745 357 aa15.22■□□□□ 0.03
TREX1-203ENST00000456089 GJA9P57773 515 aa15.22■□□□□ 0.03
TREX1-203ENST00000456089 TNFAIP2Q03169 654 aa15.22■□□□□ 0.03
TREX1-203ENST00000456089 FBXO16Q8IX29 292 aaPredicted RBP15.22■□□□□ 0.03
TREX1-203ENST00000456089 DCAF4Q8WV16 495 aa15.22■□□□□ 0.03
TREX1-203ENST00000456089 ZKSCAN3Q9BRR0 538 aa15.22■□□□□ 0.03
TREX1-203ENST00000456089 CYP39A1Q9NYL5 469 aa15.22■□□□□ 0.03
TREX1-203ENST00000456089 NEDD4P46934 1319 aa15.21■□□□□ 0.03
TREX1-203ENST00000456089 DCDC2CA8MYV0 355 aa15.21■□□□□ 0.03
TREX1-203ENST00000456089 NFIBO00712 420 aa15.21■□□□□ 0.03
TREX1-203ENST00000456089 TOP1P11387 765 aaKnown RBP15.21■□□□□ 0.03
TREX1-203ENST00000456089 CST5P28325 142 aaPredicted RBP15.21■□□□□ 0.03
TREX1-203ENST00000456089 TKFCQ3LXA3 575 aa15.21■□□□□ 0.03
TREX1-203ENST00000456089 SYDE2Q5VT97 1194 aa15.21■□□□□ 0.03
TREX1-203ENST00000456089 ANKRD33Q7Z3H0 272 aa15.21■□□□□ 0.03
TREX1-203ENST00000456089 RUFY2Q8WXA3 655 aa15.21■□□□□ 0.03
TREX1-203ENST00000456089 GLT1D1Q96MS3 346 aa15.21■□□□□ 0.03
TREX1-203ENST00000456089 RANBP17Q9H2T7 1088 aaKnown RBP15.21■□□□□ 0.03
TREX1-203ENST00000456089 CPVLQ9H3G5 476 aa15.21■□□□□ 0.03
TREX1-203ENST00000456089 SPC25Q9HBM1 224 aa15.21■□□□□ 0.03
TREX1-203ENST00000456089 UNC80Q8N2C7 3258 aa15.21■□□□□ 0.02
TREX1-203ENST00000456089 CDH23Q9H251 3354 aa15.2■□□□□ 0.02
TREX1-203ENST00000456089 ICAM1P05362 532 aa15.2■□□□□ 0.02
TREX1-203ENST00000456089 SMPD1P17405 629 aa15.2■□□□□ 0.02
TREX1-203ENST00000456089 FPGSQ05932 587 aa15.2■□□□□ 0.02
TREX1-203ENST00000456089 BAATQ14032 418 aaPredicted RBP15.2■□□□□ 0.02
TREX1-203ENST00000456089 AKNAD1Q5T1N1 836 aa15.2■□□□□ 0.02
TREX1-203ENST00000456089 ZNF697Q5TEC3 545 aa15.2■□□□□ 0.02
TREX1-203ENST00000456089 CXCL17Q6UXB2 119 aa15.2■□□□□ 0.02
TREX1-203ENST00000456089 MFSD6Q6ZSS7 791 aa15.2■□□□□ 0.02
TREX1-203ENST00000456089 PCSK9Q8NBP7 692 aaKnown RBP15.2■□□□□ 0.02
TREX1-203ENST00000456089 RNPC3Q96LT9 517 aaKnown RBP15.2■□□□□ 0.02
TREX1-203ENST00000456089 PPP1R12CQ9BZL4 782 aa15.2■□□□□ 0.02
TREX1-203ENST00000456089 ZMYM6O95789 1325 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 ASB14A6NK59 587 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 DLL1O00548 723 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 ZNF213O14771 459 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 GOLGA8HP0CJ92 632 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 PDHBP11177 359 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 CDK7P50613 346 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 FAM109BQ6ICB4 259 aaPredicted RBP15.19■□□□□ 0.02
TREX1-203ENST00000456089 TAPT1Q6NXT6 567 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 BTNL9Q6UXG8 535 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 SLC30A10Q6XR72 485 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 CENPQQ7L2Z9 268 aaPredicted RBP15.19■□□□□ 0.02
TREX1-203ENST00000456089 TLK2Q86UE8 772 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 TOX2Q96NM4 488 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 TTYH1Q9H313 450 aaPredicted RBP15.19■□□□□ 0.02
TREX1-203ENST00000456089 RNF41Q9H4P4 317 aaPredicted RBP15.19■□□□□ 0.02
TREX1-203ENST00000456089 TCP11L1Q9NUJ3 509 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 CTNNA3Q9UI47 895 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 TBX21Q9UL17 535 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 GNEQ9Y223 722 aaKnown RBP15.19■□□□□ 0.02
TREX1-203ENST00000456089 A0A0C4DFX4 3053 aa15.19■□□□□ 0.02
TREX1-203ENST00000456089 ELP1O95163 1332 aa15.18■□□□□ 0.02
TREX1-203ENST00000456089 SCN5AQ14524 2016 aa15.18■□□□□ 0.02
TREX1-203ENST00000456089 A0A0U1RQG5 324 aaPredicted RBP15.18■□□□□ 0.02
TREX1-203ENST00000456089 PTPDC1A2A3K4 754 aa15.18■□□□□ 0.02
TREX1-203ENST00000456089 ARVCFO00192 962 aa15.18■□□□□ 0.02
TREX1-203ENST00000456089 DYNC1LI2O43237 492 aaPredicted RBP15.18■□□□□ 0.02
TREX1-203ENST00000456089 TIMP1P01033 207 aa15.18■□□□□ 0.02
TREX1-203ENST00000456089 PCP11498 1178 aaKnown RBP15.18■□□□□ 0.02
TREX1-203ENST00000456089 GSPT1P15170 499 aaKnown RBP15.18■□□□□ 0.02
TREX1-203ENST00000456089 CALML3P27482 149 aa15.18■□□□□ 0.02
TREX1-203ENST00000456089 CDX2Q99626 313 aaPredicted RBP15.18■□□□□ 0.02
TREX1-203ENST00000456089 SEMA6BQ9H3T3 888 aa15.18■□□□□ 0.02
TREX1-203ENST00000456089 ACRP10323 421 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 ALDH5A1P51649 535 aaPredicted RBP15.17■□□□□ 0.02
TREX1-203ENST00000456089 PSMC6P62333 389 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 ZNF543Q08ER8 600 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 FSCN1Q16658 493 aaKnown RBP15.17■□□□□ 0.02
TREX1-203ENST00000456089 IMMTQ16891 758 aaKnown RBP15.17■□□□□ 0.02
TREX1-203ENST00000456089 KIAA1211Q6ZU35 1233 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 FAM126BQ8IXS8 530 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 CLEC4DQ8WXI8 215 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 MYLIPQ8WY64 445 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms