RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 PIM2Q9P1W9 311 aa15.4■□□□□ 0.06
CLK3-203ENST00000454830 ADAMTSL1Q8N6G6 1762 aa15.4■□□□□ 0.06
CLK3-203ENST00000454830 LRRC37AA6NMS7 1700 aa15.4■□□□□ 0.06
CLK3-203ENST00000454830 RPN1P04843 607 aaKnown RBP15.4■□□□□ 0.06
CLK3-203ENST00000454830 TAL1P17542 331 aaPredicted RBP15.4■□□□□ 0.06
CLK3-203ENST00000454830 PLCG1P19174 1290 aa15.4■□□□□ 0.06
CLK3-203ENST00000454830 ASIC1P78348 528 aa15.4■□□□□ 0.06
CLK3-203ENST00000454830 GDAQ9Y2T3 454 aa15.4■□□□□ 0.06
CLK3-203ENST00000454830 M0R2N6 131 aa15.4■□□□□ 0.06
CLK3-203ENST00000454830 CD44P16070 742 aaKnown RBP15.4■□□□□ 0.06
CLK3-203ENST00000454830 ENOX1Q8TC92 643 aaKnown RBP15.4■□□□□ 0.06
CLK3-203ENST00000454830 DLEC1Q9Y238 1755 aa15.4■□□□□ 0.06
CLK3-203ENST00000454830 SPDYE2BA6NHP3 402 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 NDUFB10O96000 172 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 SPDYE6P0CI01 402 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 FKBP1AP62942 108 aaKnown RBP15.39■□□□□ 0.05
CLK3-203ENST00000454830 EEF2KMTQ96G04 330 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 MRIQ9BWK5 157 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 ZNF70Q9UC06 446 aaPredicted RBP15.39■□□□□ 0.05
CLK3-203ENST00000454830 CDK5RAP2Q96SN8 1893 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 TMEM39BQ9GZU3 492 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 RMND1Q9NWS8 449 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 NYAP2Q9P242 653 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.39■□□□□ 0.05
CLK3-203ENST00000454830 GJA3Q9Y6H8 435 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 PLIN4Q96Q06 1357 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 SCN9AQ15858 1988 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 MYO3BQ8WXR4 1341 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 POTEMA6NI47 508 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 hCG_1984214I3L0E3 225 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 LAD1O00515 517 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 PPP1R11O60927 126 aaPredicted RBP15.39■□□□□ 0.05
CLK3-203ENST00000454830 ENTPD3O75355 529 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 TNNT1P13805 278 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 IDEP14735 1019 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 CCT6AP40227 531 aaKnown RBP15.39■□□□□ 0.05
CLK3-203ENST00000454830 PDXDC2PQ6P474 469 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 CCDC84Q86UT8 332 aaPredicted RBP15.39■□□□□ 0.05
CLK3-203ENST00000454830 ELOA2Q8IYF1 753 aaPredicted RBP15.39■□□□□ 0.05
CLK3-203ENST00000454830 ZNF713Q8N859 430 aaPredicted RBP15.39■□□□□ 0.05
CLK3-203ENST00000454830 CCDC150Q8NCX0 1101 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 RAB34Q9BZG1 259 aa15.39■□□□□ 0.05
CLK3-203ENST00000454830 SNHG28P0DPA3 235 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 E2F4Q16254 413 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 FILIP1LQ4L180 1135 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 FEZ1Q99689 392 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 SLC37A4O43826 429 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 BMP3P12645 472 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 DALRD3Q5D0E6 543 aaKnown RBP15.38■□□□□ 0.05
CLK3-203ENST00000454830 NT5DC1Q5TFE4 455 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 FCHSD1Q86WN1 690 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 ANKRD20A12PQ8NF67 263 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 IMPACTQ9P2X3 320 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 DDX25Q9UHL0 483 aaKnown RBP15.38■□□□□ 0.05
CLK3-203ENST00000454830 ZNRF3Q9ULT6 936 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 ECE1P42892 770 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 STIM1Q13586 685 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 NELFBQ8WX92 580 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 HSD3B7Q9H2F3 369 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 ARHGEF10LQ9HCE6 1279 aa15.38■□□□□ 0.05
CLK3-203ENST00000454830 ERCC5P28715 1186 aaPredicted RBP15.37■□□□□ 0.05
CLK3-203ENST00000454830 SPATA1Q5VX52 437 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 SH3RF1Q7Z6J0 888 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 CDAN1Q8IWY9 1227 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 SNX29Q8TEQ0 813 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 DCAF4Q8WV16 495 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 RIC8AQ9NPQ8 531 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 ESYT2A0FGR8 921 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 PAK1Q13153 545 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 KRT79Q5XKE5 535 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 CCDC174Q6PII3 467 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 DYMQ7RTS9 669 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 FBXO11Q86XK2 927 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 MTRQ99707 1265 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 EXOC1Q9NV70 894 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 LTBP1Q14766 1721 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 ZNF76P36508 570 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 JAG1P78504 1218 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 ARMCX5Q6P1M9 558 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 ACER1Q8TDN7 264 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 KIFC2Q96AC6 838 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 TAOK3Q9H2K8 898 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 MYH8P13535 1937 aa15.37■□□□□ 0.05
CLK3-203ENST00000454830 CXCL9Q07325 125 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 PDE4DQ08499 809 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 VPS16Q9H269 839 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 SPDYE3A6NKU9 549 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 N4BP3O15049 544 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 HOXA13P31271 388 aaPredicted RBP15.36■□□□□ 0.05
CLK3-203ENST00000454830 NOVP48745 357 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 SYDE2Q5VT97 1194 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 TRIM47Q96LD4 638 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 AMNQ9BXJ7 453 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 USP27XA6NNY8 438 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 PRPHP41219 470 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 RRP1BQ14684 758 aaKnown RBP15.36■□□□□ 0.05
CLK3-203ENST00000454830 NBPF9Q3BBW0 867 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 KMT5BQ4FZB7 885 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 CIAPIN1Q6FI81 312 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 SLC16A10Q8TF71 515 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms