RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 ARVCFO00192 962 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 CTAGE5O15320 804 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 RANBP6O60518 1105 aaKnown RBP13.83□□□□□ -0.2
GARNL3-210ENST00000453030 CDK7P50613 346 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 TNFAIP2Q03169 654 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 PPIGQ13427 754 aaKnown RBP eCLIP13.83□□□□□ -0.24e-8■■□□□ 12.8
GARNL3-210ENST00000453030 MUM1L1Q5H9M0 696 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 VPS53Q5VIR6 699 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 MFSD5Q6N075 450 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 EEPD1Q7L9B9 569 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 FBXO16Q8IX29 292 aaPredicted RBP13.83□□□□□ -0.2
GARNL3-210ENST00000453030 FAM126BQ8IXS8 530 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 IL17RBQ9NRM6 502 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 PRR12Q9ULL5 1215 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 SALL3Q9BXA9 1300 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 SCN5AQ14524 2016 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 ASB14A6NK59 587 aa13.82□□□□□ -0.2
GARNL3-210ENST00000453030 TLR3O15455 904 aaKnown RBP13.82□□□□□ -0.2
GARNL3-210ENST00000453030 CSF2RAP15509 400 aa13.82□□□□□ -0.2
GARNL3-210ENST00000453030 GRIN2CQ14957 1233 aa13.82□□□□□ -0.2
GARNL3-210ENST00000453030 TKFCQ3LXA3 575 aa13.82□□□□□ -0.2
GARNL3-210ENST00000453030 PPP4R3BQ5MIZ7 849 aa13.82□□□□□ -0.2
GARNL3-210ENST00000453030 CXCL17Q6UXB2 119 aa13.82□□□□□ -0.2
GARNL3-210ENST00000453030 NSMFQ6X4W1 530 aa13.82□□□□□ -0.2
GARNL3-210ENST00000453030 TOMM22Q9NS69 142 aa13.82□□□□□ -0.2
GARNL3-210ENST00000453030 ZBTB47Q9UFB7 747 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-210ENST00000453030 CCPG1Q9ULG6 757 aa13.82□□□□□ -0.2
GARNL3-210ENST00000453030 TANC1Q9C0D5 1861 aa13.81□□□□□ -0.2
GARNL3-210ENST00000453030 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.81□□□□□ -0.2
GARNL3-210ENST00000453030 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.81□□□□□ -0.2
GARNL3-210ENST00000453030 ACRP10323 421 aa13.81□□□□□ -0.2
GARNL3-210ENST00000453030 FSCN1Q16658 493 aaKnown RBP13.81□□□□□ -0.2
GARNL3-210ENST00000453030 RRP12Q5JTH9 1297 aaKnown RBP13.81□□□□□ -0.2
GARNL3-210ENST00000453030 TMEM240Q5SV17 173 aa13.81□□□□□ -0.2
GARNL3-210ENST00000453030 RCSD1Q6JBY9 416 aa13.81□□□□□ -0.2
GARNL3-210ENST00000453030 TMEM199Q8N511 208 aa13.81□□□□□ -0.2
GARNL3-210ENST00000453030 TIFAQ96CG3 184 aa13.81□□□□□ -0.2
GARNL3-210ENST00000453030 PURBQ96QR8 312 aaKnown RBP13.81□□□□□ -0.2
GARNL3-210ENST00000453030 PDGFCQ9NRA1 345 aa13.81□□□□□ -0.2
GARNL3-210ENST00000453030 CYP39A1Q9NYL5 469 aa13.81□□□□□ -0.2
GARNL3-210ENST00000453030 REV3LO60673 3130 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 GRXCR1A8MXD5 290 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 PLA2G6O60733 806 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 SMPD1P17405 629 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 CYP2C18P33260 490 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 SLC16A2P36021 539 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 PBX2P40425 430 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 TMEM63BQ5T3F8 832 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 ANKRD45Q5TZF3 282 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 PSRC1Q6PGN9 363 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-210ENST00000453030 C16orf59Q7L2K0 433 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 DCAF4Q8WV16 495 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 AP5M1Q9H0R1 490 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 ZNF576Q9H609 170 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 GNEQ9Y223 722 aaKnown RBP13.8□□□□□ -0.2
GARNL3-210ENST00000453030 UMODL1Q5DID0 1318 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 FRMPD2Q68DX3 1309 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-210ENST00000453030 SCN10AQ9Y5Y9 1956 aa13.8□□□□□ -0.2
GARNL3-210ENST00000453030 A0A0D9SFI3 127 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 DYNC1LI2O43237 492 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-210ENST00000453030 ORC4O43929 436 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 CD4P01730 458 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 ICAM1P05362 532 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 RRP1P56182 461 aaKnown RBP13.79□□□□□ -0.2
GARNL3-210ENST00000453030 TTBK2Q6IQ55 1244 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 ZNF365Q70YC5 407 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 USP38Q8NB14 1042 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 EVI5LQ96CN4 794 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 PBX4Q9BYU1 374 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 RANBP17Q9H2T7 1088 aaKnown RBP13.79□□□□□ -0.2
GARNL3-210ENST00000453030 HIPK3Q9H422 1215 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 ANAPC4Q9UJX5 808 aa13.79□□□□□ -0.2
GARNL3-210ENST00000453030 KIAA1217Q5T5P2 1943 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 NFIBO00712 420 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 ZEB2O60315 1214 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 HAND2P61296 217 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 PSMC6P62333 389 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 NKX3-2P78367 333 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 ITGA7Q13683 1181 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 SYDE2Q5VT97 1194 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 TAPT1Q6NXT6 567 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 CRBNQ96SW2 442 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 VTA1Q9NP79 307 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 GPCPD1Q9NPB8 672 aa13.78□□□□□ -0.2
GARNL3-210ENST00000453030 TRIP12Q14669 1992 aaPredicted RBP13.78□□□□□ -0.2
GARNL3-210ENST00000453030 PTPDC1A2A3K4 754 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 GRIN2DO15399 1336 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 B4GALT4O60513 344 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 CABYRO75952 493 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 ALDH5A1P51649 535 aaPredicted RBP13.77□□□□□ -0.21
GARNL3-210ENST00000453030 PDE1AP54750 535 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 CCL23P55773 120 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 BAATQ14032 418 aaPredicted RBP13.77□□□□□ -0.21
GARNL3-210ENST00000453030 RASIP1Q5U651 963 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 SLC30A10Q6XR72 485 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 KIAA1211Q6ZU35 1233 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 ZNF589Q86UQ0 364 aaPredicted RBP13.77□□□□□ -0.21
GARNL3-210ENST00000453030 SLC43A3Q8NBI5 491 aa13.77□□□□□ -0.21
GARNL3-210ENST00000453030 TMEM47Q9BQJ4 181 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms