RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 AGBL1Q96MI9 1066 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 GAS2L1Q99501 681 aaPredicted RBP13.87□□□□□ -0.19
HERC3-207ENST00000452979 NACAP1Q9BZK3 213 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 PPP1R12CQ9BZL4 782 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 RNF146Q9NTX7 359 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 SUPT16HQ9Y5B9 1047 aaKnown RBP13.87□□□□□ -0.19
HERC3-207ENST00000452979 CHD9Q3L8U1 2897 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 FGBP02675 491 aa13.86□□□□□ -0.19
HERC3-207ENST00000452979 SLC3A2P08195 630 aaKnown RBP13.86□□□□□ -0.19
HERC3-207ENST00000452979 ITGA7Q13683 1181 aa13.86□□□□□ -0.19
HERC3-207ENST00000452979 FSCN1Q16658 493 aaKnown RBP13.86□□□□□ -0.19
HERC3-207ENST00000452979 PPP4R3BQ5MIZ7 849 aa13.86□□□□□ -0.19
HERC3-207ENST00000452979 C20orf194Q5TEA3 1177 aa13.86□□□□□ -0.19
HERC3-207ENST00000452979 TAPT1Q6NXT6 567 aa13.86□□□□□ -0.19
HERC3-207ENST00000452979 TRERF1Q96PN7 1200 aa13.86□□□□□ -0.19
HERC3-207ENST00000452979 AP5M1Q9H0R1 490 aa13.86□□□□□ -0.19
HERC3-207ENST00000452979 PRDM12Q9H4Q4 367 aa13.86□□□□□ -0.19
HERC3-207ENST00000452979 HOMER2Q9NSB8 354 aa13.86□□□□□ -0.19
HERC3-207ENST00000452979 CXXC1Q9P0U4 656 aaPredicted RBP13.86□□□□□ -0.19
HERC3-207ENST00000452979 MSRAQ9UJ68 235 aa13.86□□□□□ -0.19
HERC3-207ENST00000452979 LCTP09848 1927 aa13.86□□□□□ -0.19
HERC3-207ENST00000452979 SMPD1P17405 629 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 SLC1A4P43007 532 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 NOVP48745 357 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 PPARAQ07869 468 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 ADGRE1Q14246 886 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 TSHZ3Q63HK5 1081 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 RCSD1Q6JBY9 416 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 TLK2Q86UE8 772 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 MORC4Q8TE76 937 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 ASB2Q96Q27 587 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 SEC62Q99442 399 aaKnown RBP13.85□□□□□ -0.19
HERC3-207ENST00000452979 MTIF3Q9H2K0 278 aaKnown RBP13.85□□□□□ -0.19
HERC3-207ENST00000452979 HIPK3Q9H422 1215 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 CYP39A1Q9NYL5 469 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 TTC41PQ6P2S7 1318 aa13.85□□□□□ -0.19
HERC3-207ENST00000452979 DYNC1LI2O43237 492 aaPredicted RBP13.84□□□□□ -0.19
HERC3-207ENST00000452979 ZEB2O60315 1214 aa13.84□□□□□ -0.19
HERC3-207ENST00000452979 MCCP23508 829 aa13.84□□□□□ -0.19
HERC3-207ENST00000452979 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
HERC3-207ENST00000452979 RPUSD2Q8IZ73 545 aaKnown RBP13.84□□□□□ -0.19
HERC3-207ENST00000452979 NOC4LQ9BVI4 516 aaKnown RBP13.84□□□□□ -0.19
HERC3-207ENST00000452979 PDGFCQ9NRA1 345 aa13.84□□□□□ -0.19
HERC3-207ENST00000452979 IL17RBQ9NRM6 502 aa13.84□□□□□ -0.19
HERC3-207ENST00000452979 PRR12Q9ULL5 1215 aa13.84□□□□□ -0.19
HERC3-207ENST00000452979 UMODL1Q5DID0 1318 aa13.84□□□□□ -0.19
HERC3-207ENST00000452979 B4GALT4O60513 344 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 ALAS1P13196 640 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 MUM1L1Q5H9M0 696 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 TMEM63BQ5T3F8 832 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 KCTD1Q719H9 257 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 PI4K2BQ8TCG2 481 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 PPM1EQ8WY54 764 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 VWCEQ96DN2 955 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 NAPBQ9H115 298 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 TRPV6Q9H1D0 765 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 WNT8AQ9H1J5 351 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 SLC28A3Q9HAS3 691 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 VTA1Q9NP79 307 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 THEGQ9P2T0 379 aa13.83□□□□□ -0.2
HERC3-207ENST00000452979 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.83□□□□□ -0.2
HERC3-207ENST00000452979 YBX2Q9Y2T7 364 aaKnown RBP13.83□□□□□ -0.2
HERC3-207ENST00000452979 LOC102724159A0A0B4J2E5 919 aa13.82□□□□□ -0.2
HERC3-207ENST00000452979 FOXP2O15409 715 aa13.82□□□□□ -0.2
HERC3-207ENST00000452979 PTGS1P23219 599 aa13.82□□□□□ -0.2
HERC3-207ENST00000452979 CCL23P55773 120 aa13.82□□□□□ -0.2
HERC3-207ENST00000452979 MRPS5P82675 430 aaKnown RBP13.82□□□□□ -0.2
HERC3-207ENST00000452979 IKQ13123 557 aaPredicted RBP13.82□□□□□ -0.2
HERC3-207ENST00000452979 PWP2Q15269 919 aaKnown RBP13.82□□□□□ -0.2
HERC3-207ENST00000452979 OTOP2Q7RTS6 562 aa13.82□□□□□ -0.2
HERC3-207ENST00000452979 NKX2-4Q9H2Z4 354 aa13.82□□□□□ -0.2
HERC3-207ENST00000452979 STX8Q9UNK0 236 aa13.82□□□□□ -0.2
HERC3-207ENST00000452979 DDX49Q9Y6V7 483 aaKnown RBP13.82□□□□□ -0.2
HERC3-207ENST00000452979 TTC28Q96AY4 2481 aa13.82□□□□□ -0.2
HERC3-207ENST00000452979 RBM47A0AV96 593 aaKnown RBP13.81□□□□□ -0.2
HERC3-207ENST00000452979 ERC2O15083 957 aa13.81□□□□□ -0.2
HERC3-207ENST00000452979 ICAM1P05362 532 aa13.81□□□□□ -0.2
HERC3-207ENST00000452979 FGRP09769 529 aa13.81□□□□□ -0.2
HERC3-207ENST00000452979 PSMC6P62333 389 aa13.81□□□□□ -0.2
HERC3-207ENST00000452979 DUSP28Q4G0W2 176 aa13.81□□□□□ -0.2
HERC3-207ENST00000452979 BTNL9Q6UXG8 535 aa13.81□□□□□ -0.2
HERC3-207ENST00000452979 FBXO16Q8IX29 292 aaPredicted RBP13.81□□□□□ -0.2
HERC3-207ENST00000452979 ALDH8A1Q9H2A2 487 aaPredicted RBP13.81□□□□□ -0.2
HERC3-207ENST00000452979 RANBP17Q9H2T7 1088 aaKnown RBP13.81□□□□□ -0.2
HERC3-207ENST00000452979 INCENPQ9NQS7 918 aa13.81□□□□□ -0.2
HERC3-207ENST00000452979 ADD3Q9UEY8 706 aaKnown RBP13.81□□□□□ -0.2
HERC3-207ENST00000452979 ANAPC4Q9UJX5 808 aa13.81□□□□□ -0.2
HERC3-207ENST00000452979 ISY1Q9ULR0 285 aaKnown RBP13.81□□□□□ -0.2
HERC3-207ENST00000452979 PCDHA11Q9Y5I1 949 aa13.81□□□□□ -0.2
HERC3-207ENST00000452979 TSPY2A6NKD2 308 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 NMT2O60551 498 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 PFKMP08237 780 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 SUPT20HL2P0C7V6 817 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 IGFBP4P22692 258 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 SNAP25P60880 206 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 CCDC85BQ15834 202 aaPredicted RBP13.8□□□□□ -0.2
HERC3-207ENST00000452979 KIAA1211Q6ZU35 1233 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 EEPD1Q7L9B9 569 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 ADAMTS19Q8TE59 1207 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms