RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 FDX1P10109 184 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 HMGCS2P54868 508 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 ORC2Q13416 577 aaPredicted RBP12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 SNW1Q13573 536 aaKnown RBP12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 UBE2SQ16763 222 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 USH1GQ495M9 461 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 MCTP2Q6DN12 878 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 CCDC174Q6PII3 467 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 SHC4Q6S5L8 630 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 NEK8Q86SG6 692 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 ANKRD13AQ8IZ07 590 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 C4orf32Q8N8J7 132 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 TBCKQ8TEA7 893 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 FERMT2Q96AC1 680 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 CLIC6Q96NY7 704 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 TANGO6Q9C0B7 1094 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 CLSTN2Q9H4D0 955 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 HPSEQ9Y251 543 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 MRVI1Q9Y6F6 885 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 ZNF536O15090 1300 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 ABCB11O95342 1321 aa12.81□□□□□ -0.36
NDUFA3-209ENST00000451517 SPDYE5A6NIY4 337 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 PIK3CDO00329 1044 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 MEIS2O14770 477 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 EDIL3O43854 480 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 ICAM1P05362 532 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 PFKFB1P16118 471 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 TAL1P17542 331 aaPredicted RBP12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 MCM7P33993 719 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 NDUFA8P51970 172 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 PPATQ06203 517 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 PTGDRQ13258 359 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 AP3B2Q13367 1082 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 ARMC9Q7Z3E5 817 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 ERO1BQ86YB8 467 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 FMR1NBQ8N0W7 255 aaPredicted RBP12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 NUP62CLQ9H1M0 184 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 RRAGCQ9HB90 399 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 SLC38A10Q9HBR0 1119 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 TMOD4Q9NZQ9 345 aa12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 MRPL11Q9Y3B7 192 aaKnown RBP12.8□□□□□ -0.36
NDUFA3-209ENST00000451517 A0A1B0GVL5 298 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 SYCE3A1L190 88 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 UNCXA6NJT0 531 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 LAD1O00515 517 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 FLOT1O75955 427 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 GRIN1Q05586 938 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 TTLL12Q14166 644 aaPredicted RBP12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 LETM2Q2VYF4 491 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 LDLRAD1Q5T700 205 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 MAP1SQ66K74 1059 aaPredicted RBP12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 ARL6IP4Q66PJ3 421 aaKnown RBP12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 USP17L6PQ6QN14 398 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 RBM43Q6ZSC3 357 aaKnown RBP12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 MOB2Q70IA6 237 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 LDHDQ86WU2 507 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 CLMNQ96JQ2 1002 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 ELP3Q9H9T3 547 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 PNMA2Q9UL42 364 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 MYPNQ86TC9 1320 aa12.79□□□□□ -0.36
NDUFA3-209ENST00000451517 FSD2A1L4K1 749 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 CXCL11O14625 94 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 CCNT1O60563 726 aaKnown RBP12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 KINO60870 393 aaKnown RBP12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 ZBED4O75132 1171 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 FOSP01100 380 aaPredicted RBP12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 DSG3P32926 999 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 PRPHP41219 470 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 PPIL2Q13356 520 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 LRSAM1Q6UWE0 723 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 CATSPERGQ6ZRH7 1159 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 REPS2Q8NFH8 660 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 P2RX7Q99572 595 aaKnown RBP12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 NAP1L4Q99733 375 aaKnown RBP12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 ANO3Q9BYT9 981 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 CSRNP2Q9H175 543 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 TMEM60Q9H2L4 133 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 CCPG1Q9ULG6 757 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 ADAMTS5Q9UNA0 930 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 KCNH4Q9UQ05 1017 aa12.78□□□□□ -0.36
NDUFA3-209ENST00000451517 A0A0G2JLL6 359 aaPredicted RBP12.77□□□□□ -0.37
NDUFA3-209ENST00000451517 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
NDUFA3-209ENST00000451517 TRAF5O00463 557 aa12.77□□□□□ -0.37
NDUFA3-209ENST00000451517 VWA5AO00534 786 aa12.77□□□□□ -0.37
NDUFA3-209ENST00000451517 CTAGE5O15320 804 aa12.77□□□□□ -0.37
NDUFA3-209ENST00000451517 NEMFO60524 1076 aa12.77□□□□□ -0.37
NDUFA3-209ENST00000451517 SYKP43405 635 aa12.77□□□□□ -0.37
NDUFA3-209ENST00000451517 USP11P51784 963 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms