RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 MB21D1Q8N884 522 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 REPS2Q8NFH8 660 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 BRI3BPQ8WY22 251 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 CCDC102AQ96A19 550 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 HHIPL1Q96JK4 782 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 CFAP45Q9UL16 551 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 SLC45A1Q9Y2W3 748 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 CCDC194A0A1B0GVG4 234 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 ATP2A1O14983 1001 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 NCLP19338 710 aaKnown RBP10.91□□□□□ -0.66
NPHP1-207ENST00000445609 TMEM132BQ14DG7 1078 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 LBX2Q6XYB7 198 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 RASGRP4Q8TDF6 673 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 TFIP11Q9UBB9 837 aaKnown RBP10.91□□□□□ -0.66
NPHP1-207ENST00000445609 BIN2Q9UBW5 565 aaPredicted RBP10.91□□□□□ -0.66
NPHP1-207ENST00000445609 PNMA3Q9UL41 463 aa10.91□□□□□ -0.66
NPHP1-207ENST00000445609 BTBD19C9JJ37 291 aa10.9□□□□□ -0.66
NPHP1-207ENST00000445609 TAL1P17542 331 aaPredicted RBP10.9□□□□□ -0.66
NPHP1-207ENST00000445609 HERVK_113P62684 666 aa10.9□□□□□ -0.66
NPHP1-207ENST00000445609 RILPL1Q5EBL4 403 aa10.9□□□□□ -0.66
NPHP1-207ENST00000445609 EARS2Q5JPH6 523 aaKnown RBP10.9□□□□□ -0.66
NPHP1-207ENST00000445609 PIK3AP1Q6ZUJ8 805 aa10.9□□□□□ -0.66
NPHP1-207ENST00000445609 KRT25Q7Z3Z0 450 aa10.9□□□□□ -0.66
NPHP1-207ENST00000445609 ANKRD23Q86SG2 305 aa10.9□□□□□ -0.66
NPHP1-207ENST00000445609 TRPM7Q96QT4 1865 aa10.9□□□□□ -0.66
NPHP1-207ENST00000445609 ZNF214Q9UL59 606 aaPredicted RBP10.9□□□□□ -0.66
NPHP1-207ENST00000445609 CNPY2Q9Y2B0 182 aa10.9□□□□□ -0.66
NPHP1-207ENST00000445609 MYH6P13533 1939 aa10.9□□□□□ -0.66
NPHP1-207ENST00000445609 MANSC4A6NHS7 340 aaPredicted RBP10.9□□□□□ -0.67
NPHP1-207ENST00000445609 GOLGA6L22H0YM25 854 aa10.9□□□□□ -0.67
NPHP1-207ENST00000445609 PDHXO00330 501 aa10.9□□□□□ -0.67
NPHP1-207ENST00000445609 OPLAHO14841 1288 aa10.9□□□□□ -0.67
NPHP1-207ENST00000445609 SLC10A3P09131 477 aa10.9□□□□□ -0.67
NPHP1-207ENST00000445609 ALAS1P13196 640 aa10.9□□□□□ -0.67
NPHP1-207ENST00000445609 CLK2P49760 499 aaKnown RBP10.9□□□□□ -0.67
NPHP1-207ENST00000445609 JAKMIP3Q5VZ66 844 aa10.9□□□□□ -0.67
NPHP1-207ENST00000445609 MCTP2Q6DN12 878 aa10.9□□□□□ -0.67
NPHP1-207ENST00000445609 TEX13BQ9BXU2 312 aa10.9□□□□□ -0.67
NPHP1-207ENST00000445609 SCAND2PQ9GZW5 306 aaPredicted RBP10.9□□□□□ -0.67
NPHP1-207ENST00000445609 NOL7Q9UMY1 257 aaKnown RBP10.9□□□□□ -0.67
NPHP1-207ENST00000445609 LOC285556D6RIA3 1793 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 TESPA1A2RU30 521 aaPredicted RBP10.89□□□□□ -0.67
NPHP1-207ENST00000445609 FAM205CA6NFA0 338 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 PIK3CDO00329 1044 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 MEIS2O14770 477 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 MCM4P33991 863 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 STAT3P40763 770 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 UBE2SQ16763 222 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 NOM1Q5C9Z4 860 aaKnown RBP10.89□□□□□ -0.67
NPHP1-207ENST00000445609 SNRNP48Q6IEG0 339 aaKnown RBP10.89□□□□□ -0.67
NPHP1-207ENST00000445609 USP17L6PQ6QN14 398 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 POTEEQ6S8J3 1075 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 MCF2L2Q86YR7 1114 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 USP28Q96RU2 1077 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 TMEM260Q9NX78 707 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 TRAPPC10P48553 1259 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 TOB1P50616 345 aaPredicted RBP10.89□□□□□ -0.67
NPHP1-207ENST00000445609 INHBEP58166 350 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 PLS1Q14651 629 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 NONOQ15233 471 aaKnown RBP eCLIP10.89□□□□□ -0.67
NPHP1-207ENST00000445609 GTF3C2Q8WUA4 911 aaPredicted RBP10.89□□□□□ -0.67
NPHP1-207ENST00000445609 CLEC4DQ8WXI8 215 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 TRERF1Q96PN7 1200 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 PTPN18Q99952 460 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 RTEL1Q9NZ71 1219 aa10.89□□□□□ -0.67
NPHP1-207ENST00000445609 PTPRFP10586 1907 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 FAM155AB1AL88 458 aaPredicted RBP10.88□□□□□ -0.67
NPHP1-207ENST00000445609 GCOM1H8Y6P7 765 aaPredicted RBP10.88□□□□□ -0.67
NPHP1-207ENST00000445609 FIBPO43427 364 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 CFBP00751 764 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 POLR2MP0CAP2 368 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 ATP2B1P20020 1258 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 CEBPZQ03701 1054 aaKnown RBP10.88□□□□□ -0.67
NPHP1-207ENST00000445609 NFKBIBQ15653 356 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 CSPP1Q1MSJ5 1256 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 TKFCQ3LXA3 575 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 FAM43AQ8N2R8 423 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.67
NPHP1-207ENST00000445609 GDPD2Q9HCC8 539 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 HOMER2Q9NSB8 354 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 POLR3EQ9NVU0 708 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 BTBD7Q9P203 1132 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 RIPK3Q9Y572 518 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 FOSP01100 380 aaPredicted RBP10.88□□□□□ -0.67
NPHP1-207ENST00000445609 CYP2C8P10632 490 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 HOXA13P31271 388 aaPredicted RBP10.88□□□□□ -0.67
NPHP1-207ENST00000445609 APLP1P51693 650 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 AP3B2Q13367 1082 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 ANO1Q5XXA6 986 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 SAMD3Q8N6K7 520 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 SMCR8Q8TEV9 937 aaPredicted RBP10.88□□□□□ -0.67
NPHP1-207ENST00000445609 TBC1D5Q92609 795 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 SPATA32Q96LK8 384 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 PAGR1Q9BTK6 254 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 RNF146Q9NTX7 359 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 RBPJLQ9UBG7 517 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 CLIC4Q9Y696 253 aa10.88□□□□□ -0.67
NPHP1-207ENST00000445609 SPDYE3A6NKU9 549 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms