RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 CLSTN2Q9H4D0 955 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 MROH8Q9H579 483 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 BRD9Q9H8M2 597 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 TRPV4Q9HBA0 871 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 TCF7L1Q9HCS4 588 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 ARFGAP3Q9NP61 516 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 INTS7Q9NVH2 962 aaKnown RBP3.14□□□□□ -1.91
UBBP3-201ENST00000445497 RRN3Q9NYV6 651 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 ACTR10Q9NZ32 417 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 HDAC6Q9UBN7 1215 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 SH3BGRL2Q9UJC5 107 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 FAM50BQ9Y247 325 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 SSX2IPQ9Y2D8 614 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.14□□□□□ -1.91
UBBP3-201ENST00000445497 SNX8Q9Y5X2 465 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 TACC3Q9Y6A5 838 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 KDM2BQ8NHM5 1336 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 RAD50Q92878 1312 aa3.14□□□□□ -1.91
UBBP3-201ENST00000445497 PHLDB1Q86UU1 1377 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 SERTM1A2A2V5 107 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 FAM221AA4D161 298 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 POTEFA5A3E0 1075 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 GSG1L2A8MUP6 293 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 FAM155AB1AL88 458 aaPredicted RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 RASA4BC9J798 803 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 M0R2N6 131 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 SLC27A2O14975 620 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 SMAD7O15105 426 aaKnown RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 PRPF3O43395 683 aaKnown RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 FOXO3O43524 673 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 FRS3O43559 492 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 ADAMTS4O75173 837 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 USP2O75604 605 aaPredicted RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 DDHD2O94830 711 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 FBXO21O94952 628 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 SNUPNO95149 360 aaKnown RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 SNX4O95219 450 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 NPTXRO95502 500 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 GUCA1CO95843 209 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 CD4P01730 458 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 IGHA2P01877 340 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 OPN1MWP04001 364 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 ITGB1P05556 798 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 FBXO45P0C2W1 286 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 OPN1MW2P0DN77 364 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 OPN1MW3P0DN78 364 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 ARF4P18085 180 aaPredicted RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 HNF4AP41235 474 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 PHKA1P46020 1223 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 SMTNP53814 917 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 PRSS12P56730 875 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 PPP2R3AQ06190 1150 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 SSRP1Q08945 709 aaKnown RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 KIF5AQ12840 1032 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 FAPQ12884 760 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 NMIQ13287 307 aaPredicted RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 POSTNQ15063 836 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 INAQ16352 499 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 C15orf59Q2T9L4 293 aaPredicted RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 ANKDD1AQ495B1 522 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 KRTCAP3Q53RY4 240 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 CCDC178Q5BJE1 867 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 SYDE2Q5VT97 1194 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 NUGGCQ68CJ6 796 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 FCRLBQ6BAA4 426 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 XRRA1Q6P2D8 792 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 BRICD5Q6PL45 260 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 POTEEQ6S8J3 1075 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 SPOCD1Q6ZMY3 1216 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 ARHGEF18Q6ZSZ5 1173 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 NEK10Q6ZWH5 1172 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 PPP1R42Q7Z4L9 355 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 EPHX4Q8IUS5 362 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 TBC1D21Q8IYX1 336 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 CBARPQ8N350 705 aaPredicted RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 CAMKK1Q8N5S9 505 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 CELF2-AS1Q8N7Q2 184 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 PDCD7Q8N8D1 485 aaKnown RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 ABTB2Q8N961 1025 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 TPCN2Q8NHX9 752 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 CTCFLQ8NI51 663 aaPredicted RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 CCHCR1Q8TD31 782 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 DENND1AQ8TEH3 1009 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 NLRP7Q8WX94 980 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 ASIC4Q96FT7 647 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 LTV1Q96GA3 475 aaPredicted RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 RBM18Q96H35 190 aaKnown RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 EPSTI1Q96J88 318 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 C8orf76Q96K31 380 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 CEP295NLQ96MC4 621 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 CCDC43Q96MW1 224 aaKnown RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 AIFM3Q96NN9 605 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 FAM193BQ96PV7 902 aaPredicted RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 NUP88Q99567 741 aaPredicted RBP3.13□□□□□ -1.91
UBBP3-201ENST00000445497 FSD1Q9BTV5 496 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 CENPOQ9BU64 300 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 SRCIN1Q9C0H9 1055 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 NT5C3AQ9H0P0 336 aa3.13□□□□□ -1.91
UBBP3-201ENST00000445497 CDHR5Q9HBB8 845 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms