RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 A0A1W2PQ27 194 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 A0A1W2PQ64 194 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 A0A1W2PQD8 194 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 WNT7AO00755 349 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 MCM7P33993 719 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 UBE2SQ16763 222 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 ANKRD13AQ8IZ07 590 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 AFG3L2Q9Y4W6 797 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 PHIPQ8WWQ0 1821 aa10.84□□□□□ -0.67
SMPD4P1-203ENST00000443839 NR1I2O75469 434 aa10.83□□□□□ -0.68
SMPD4P1-203ENST00000443839 PTGDRQ13258 359 aa10.83□□□□□ -0.68
SMPD4P1-203ENST00000443839 AXDND1Q5T1B0 1012 aaPredicted RBP10.83□□□□□ -0.68
SMPD4P1-203ENST00000443839 MOB2Q70IA6 237 aa10.83□□□□□ -0.68
SMPD4P1-203ENST00000443839 ARMC9Q7Z3E5 817 aa10.83□□□□□ -0.68
SMPD4P1-203ENST00000443839 NEK8Q86SG6 692 aa10.83□□□□□ -0.68
SMPD4P1-203ENST00000443839 ZNF408Q9H9D4 720 aa10.83□□□□□ -0.68
SMPD4P1-203ENST00000443839 ELP3Q9H9T3 547 aa10.83□□□□□ -0.68
SMPD4P1-203ENST00000443839 CTDP1Q9Y5B0 961 aaPredicted RBP10.83□□□□□ -0.68
SMPD4P1-203ENST00000443839 A0A1B0GVL5 298 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 USP17L15C9J2P7 530 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 USP17L13C9JLJ4 530 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 USP17L11C9JVI0 530 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 USP17L18D6R9N7 530 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 USP17L22D6RA61 530 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 USP17L17D6RBQ6 530 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 USP17L19D6RCP7 530 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 USP17L20D6RJB6 530 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 CUTAO60888 179 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 TAL1P17542 331 aaPredicted RBP10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 CMA1P23946 247 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 FAM160A1Q05DH4 1040 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 USP17L24Q0WX57 530 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 LETM2Q2VYF4 491 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 USP17L6PQ6QN14 398 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 TBCKQ8TEA7 893 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 ZNF526Q8TF50 670 aaPredicted RBP10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 OTUD5Q96G74 571 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 CLMNQ96JQ2 1002 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 C12orf42Q96LP6 360 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 CLIC6Q96NY7 704 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 GOLPH3LQ9H4A5 285 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 DDX19AQ9NUU7 478 aaKnown RBP10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 FBXO2Q9UK22 296 aaPredicted RBP10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 PPP1R9AQ9ULJ8 1098 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 SYCE3A1L190 88 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 TRAF5O00463 557 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 PTPREP23469 700 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 ATP2C1P98194 919 aaPredicted RBP10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 ERO1BQ86YB8 467 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 NUP62CLQ9H1M0 184 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 CCPG1Q9ULG6 757 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 MRVI1Q9Y6F6 885 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 PAPPA2Q9BXP8 1791 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 SMCHD1A6NHR9 2005 aa10.82□□□□□ -0.68
SMPD4P1-203ENST00000443839 CCNT1O60563 726 aaKnown RBP10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 KINO60870 393 aaKnown RBP10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 ICAM1P05362 532 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 CLK2P49760 499 aaKnown RBP10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 NDUFA8P51970 172 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 PPATQ06203 517 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 MAP3K11Q16584 847 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 L1TD1Q5T7N2 865 aaKnown RBP10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 SHC4Q6S5L8 630 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 LDHDQ86WU2 507 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 FERMT2Q96AC1 680 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 SRPRBQ9Y5M8 271 aaKnown RBP10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 MORC2Q9Y6X9 1032 aaPredicted RBP10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 SPDYE5A6NIY4 337 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 SPDYE3A6NKU9 549 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 MEIS2O14770 477 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 ZBED4O75132 1171 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 PFKFB1P16118 471 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 AP3B2Q13367 1082 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 CAMK4Q16566 473 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 MCTP2Q6DN12 878 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 CPXCR1Q8N123 301 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 TNMDQ9H2S6 317 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 SLC38A10Q9HBR0 1119 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 NMRK2Q9NPI5 230 aa10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 MRPL11Q9Y3B7 192 aaKnown RBP10.81□□□□□ -0.68
SMPD4P1-203ENST00000443839 ABCB11O95342 1321 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 VWA3AA6NCI4 1184 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 OPLAHO14841 1288 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 IRF6O14896 467 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 NEMFO60524 1076 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 LETM1O95202 739 aaPredicted RBP10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 CFBP00751 764 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 FDX1P10109 184 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 ZNF445P59923 1031 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 GRIN1Q05586 938 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 SNW1Q13573 536 aaKnown RBP10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 SH3D19Q5HYK7 790 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 SPECC1Q5M775 1068 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 RESP18Q5W5W9 173 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 FMR1NBQ8N0W7 255 aaPredicted RBP10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 ZNF579Q8NAF0 562 aaKnown RBP10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 AGBL1Q96MI9 1066 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 FAM13BQ9NYF5 915 aa10.8□□□□□ -0.68
SMPD4P1-203ENST00000443839 FSD2A1L4K1 749 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms