RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 MORC4Q8TE76 937 aa12.02□□□□□ -0.49
HDLBP-219ENST00000442714 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.02□□□□□ -0.494e-6■■□□□ 12.3
HDLBP-219ENST00000442714 PDGFCQ9NRA1 345 aa12.02□□□□□ -0.49
HDLBP-219ENST00000442714 TCP11L1Q9NUJ3 509 aa12.02□□□□□ -0.49
HDLBP-219ENST00000442714 Q9Y3F1 56 aa12.02□□□□□ -0.49
HDLBP-219ENST00000442714 GRIN2DO15399 1336 aa12.02□□□□□ -0.49
HDLBP-219ENST00000442714 TTC28Q96AY4 2481 aa12.02□□□□□ -0.49
HDLBP-219ENST00000442714 DYNC1LI2O43237 492 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-219ENST00000442714 CABYRO75952 493 aa12.01□□□□□ -0.49
HDLBP-219ENST00000442714 ICAM1P05362 532 aa12.01□□□□□ -0.49
HDLBP-219ENST00000442714 CSF2RAP15509 400 aa12.01□□□□□ -0.49
HDLBP-219ENST00000442714 IKQ13123 557 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-219ENST00000442714 GRIN2CQ14957 1233 aa12.01□□□□□ -0.49
HDLBP-219ENST00000442714 MCMDC2Q4G0Z9 681 aa12.01□□□□□ -0.49
HDLBP-219ENST00000442714 CCDC174Q6PII3 467 aa12.01□□□□□ -0.49
HDLBP-219ENST00000442714 DCAF4Q8WV16 495 aa12.01□□□□□ -0.49
HDLBP-219ENST00000442714 MYLIPQ8WY64 445 aa12.01□□□□□ -0.49
HDLBP-219ENST00000442714 PURBQ96QR8 312 aaKnown RBP12.01□□□□□ -0.49
HDLBP-219ENST00000442714 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
HDLBP-219ENST00000442714 DDX49Q9Y6V7 483 aaKnown RBP12.01□□□□□ -0.49
HDLBP-219ENST00000442714 VCANP13611 3396 aa12.01□□□□□ -0.49
HDLBP-219ENST00000442714 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
HDLBP-219ENST00000442714 ZNFX1Q9P2E3 1918 aaKnown RBP12.01□□□□□ -0.49
HDLBP-219ENST00000442714 HSPD1P10809 573 aaKnown RBP12□□□□□ -0.49
HDLBP-219ENST00000442714 TOP1P11387 765 aaKnown RBP12□□□□□ -0.49
HDLBP-219ENST00000442714 PTGS1P23219 599 aa12□□□□□ -0.49
HDLBP-219ENST00000442714 SLC16A2P36021 539 aa12□□□□□ -0.49
HDLBP-219ENST00000442714 PPIGQ13427 754 aaKnown RBP eCLIP12□□□□□ -0.494e-13■■□□□ 12.2
HDLBP-219ENST00000442714 FSCN1Q16658 493 aaKnown RBP12□□□□□ -0.49
HDLBP-219ENST00000442714 CXCL17Q6UXB2 119 aa12□□□□□ -0.49
HDLBP-219ENST00000442714 ZNF365Q70YC5 407 aa12□□□□□ -0.49
HDLBP-219ENST00000442714 NOL8Q76FK4 1167 aaKnown RBP12□□□□□ -0.49
HDLBP-219ENST00000442714 RASGRP2Q7LDG7 609 aa12□□□□□ -0.49
HDLBP-219ENST00000442714 TMEM199Q8N511 208 aa12□□□□□ -0.49
HDLBP-219ENST00000442714 MAFAQ8NHW3 353 aaPredicted RBP12□□□□□ -0.49
HDLBP-219ENST00000442714 FAM227BQ96M60 508 aa12□□□□□ -0.49
HDLBP-219ENST00000442714 TTC14Q96N46 770 aa12□□□□□ -0.49
HDLBP-219ENST00000442714 SEZ6LQ9BYH1 1024 aa12□□□□□ -0.49
HDLBP-219ENST00000442714 AP5M1Q9H0R1 490 aa12□□□□□ -0.49
HDLBP-219ENST00000442714 RANBP17Q9H2T7 1088 aaKnown RBP12□□□□□ -0.49
HDLBP-219ENST00000442714 ISY1Q9ULR0 285 aaKnown RBP12□□□□□ -0.49
HDLBP-219ENST00000442714 ACRP10323 421 aa11.99□□□□□ -0.49
HDLBP-219ENST00000442714 CYP2C18P33260 490 aa11.99□□□□□ -0.49
HDLBP-219ENST00000442714 RRP1P56182 461 aaKnown RBP11.99□□□□□ -0.49
HDLBP-219ENST00000442714 ITGA7Q13683 1181 aa11.99□□□□□ -0.49
HDLBP-219ENST00000442714 BAATQ14032 418 aaPredicted RBP11.99□□□□□ -0.49
HDLBP-219ENST00000442714 EEPD1Q7L9B9 569 aa11.99□□□□□ -0.49
HDLBP-219ENST00000442714 CRBNQ96SW2 442 aa11.99□□□□□ -0.49
HDLBP-219ENST00000442714 ZNF576Q9H609 170 aa11.99□□□□□ -0.49
HDLBP-219ENST00000442714 CCPG1Q9ULG6 757 aa11.99□□□□□ -0.49
HDLBP-219ENST00000442714 GREB1LQ9C091 1923 aaPredicted RBP11.99□□□□□ -0.49
HDLBP-219ENST00000442714 PRUNE2Q8WUY3 3088 aa11.99□□□□□ -0.49
HDLBP-219ENST00000442714 CDH23Q9H251 3354 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 A0A0D9SFI3 127 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 RBM47A0AV96 593 aaKnown RBP11.98□□□□□ -0.49
HDLBP-219ENST00000442714 GRXCR1A8MXD5 290 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 TLR3O15455 904 aaKnown RBP11.98□□□□□ -0.49
HDLBP-219ENST00000442714 ZEB2O60315 1214 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 DNAJB2P25686 324 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 DUSP28Q4G0W2 176 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 NSMFQ6X4W1 530 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 KIAA1211Q6ZU35 1233 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 TLK2Q86UE8 772 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 CLEC4DQ8WXI8 215 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 HERVK_113Q902F9 699 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 TIFAQ96CG3 184 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 VWCEQ96DN2 955 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 TRPV6Q9H1D0 765 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 VTA1Q9NP79 307 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 GPCPD1Q9NPB8 672 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 IL23AQ9NPF7 189 aa11.98□□□□□ -0.49
HDLBP-219ENST00000442714 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
HDLBP-219ENST00000442714 SPTBN5Q9NRC6 3674 aaKnown RBP11.98□□□□□ -0.49
HDLBP-219ENST00000442714 LOC102724159A0A0B4J2E5 919 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 FGBP02675 491 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 SNHG28P0DPA3 235 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 FOSL2P15408 326 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 PBX2P40425 430 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 NMIQ13287 307 aaPredicted RBP11.97□□□□□ -0.49
HDLBP-219ENST00000442714 PWP2Q15269 919 aaKnown RBP11.97□□□□□ -0.49
HDLBP-219ENST00000442714 SYDE2Q5VT97 1194 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 ZNF589Q86UQ0 364 aaPredicted RBP11.97□□□□□ -0.49
HDLBP-219ENST00000442714 FBXO16Q8IX29 292 aaPredicted RBP11.97□□□□□ -0.49
HDLBP-219ENST00000442714 PBX4Q9BYU1 374 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 WDR11Q9BZH6 1224 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 PPP1R12CQ9BZL4 782 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 MTMR7Q9Y216 660 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 PARP14Q460N5 1801 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 FRMPD3Q5JV73 1810 aa11.97□□□□□ -0.49
HDLBP-219ENST00000442714 NFIBO00712 420 aa11.96□□□□□ -0.49
HDLBP-219ENST00000442714 PDHBP11177 359 aa11.96□□□□□ -0.49
HDLBP-219ENST00000442714 PSMC6P62333 389 aa11.96□□□□□ -0.49
HDLBP-219ENST00000442714 ZNF543Q08ER8 600 aa11.96□□□□□ -0.49
HDLBP-219ENST00000442714 CCDC96Q2M329 555 aa11.96□□□□□ -0.49
HDLBP-219ENST00000442714 RRP12Q5JTH9 1297 aaKnown RBP11.96□□□□□ -0.49
HDLBP-219ENST00000442714 AKNAD1Q5T1N1 836 aa11.96□□□□□ -0.49
HDLBP-219ENST00000442714 MFSD6Q6ZSS7 791 aa11.96□□□□□ -0.49
HDLBP-219ENST00000442714 RGS22Q8NE09 1264 aa11.96□□□□□ -0.49
HDLBP-219ENST00000442714 NOC4LQ9BVI4 516 aaKnown RBP11.96□□□□□ -0.49
HDLBP-219ENST00000442714 HIPK3Q9H422 1215 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms