RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 PALM3A6NDB9 673 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 B4DLN1 442 aa18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 SLC35G1Q2M3R5 365 aa18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 TRAPPC11Q7Z392 1133 aa18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 EHBP1Q8NDI1 1231 aa18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 TMEM47Q9BQJ4 181 aa18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 ZNHIT6Q9NWK9 470 aaKnown RBP18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 KRT86O43790 486 aa18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 PLCG1P19174 1290 aa18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 CYLC1P35663 651 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 PDE4DQ08499 809 aa18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 RETREG2Q8NC44 543 aa18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 NOA1Q8NC60 698 aaKnown RBP18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 ZMYND12Q9H0C1 365 aa18.47■□□□□ 0.55
SEMA3B-207ENST00000441915 NRAPQ86VF7 1730 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 ZPR1O75312 459 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 IPO7O95373 1038 aaKnown RBP18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 OR52Z1P0C646 297 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 CCNE1P24864 410 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 GSTO1P78417 241 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 MEA1Q16626 185 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 TXNRD1Q16881 649 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 KIAA1328Q86T90 577 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 FAM114A1Q8IWE2 563 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 TGFBRAP1Q8WUH2 860 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 ZNF287Q9HBT7 754 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 ANKIB1Q9P2G1 1089 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 AHDC1Q5TGY3 1603 aaPredicted RBP18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 KLRF2D3W0D1 207 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 CCNT1O60563 726 aaKnown RBP18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 PPP1R2P41236 205 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 GYS2P54840 703 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 NAPAP54920 295 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 TBC1D8BQ0IIM8 1120 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 LETM2Q2VYF4 491 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 KRT25Q7Z3Z0 450 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 P2RX5Q93086 422 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 DUSP9Q99956 384 aaKnown RBP18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 TRIM9Q9C026 710 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 SUGCTQ9HAC7 445 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 PSD3Q9NYI0 1048 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 SRP68Q9UHB9 627 aaKnown RBP18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 SAR1BQ9Y6B6 198 aa18.46■□□□□ 0.55
SEMA3B-207ENST00000441915 ENC1O14682 589 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 GOLGA8HP0CJ92 632 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 HERVK_113P62684 666 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 DIXDC1Q155Q3 683 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 WDR93Q6P2C0 686 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 ZNF662Q6ZS27 426 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 SLC44A5Q8NCS7 719 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 AGPAT5Q9NUQ2 364 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 FLT1P17948 1338 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 IRS2Q9Y4H2 1338 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 GNA11P29992 359 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 AMPD3Q01432 767 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 MAPK8IP2Q13387 824 aaPredicted RBP18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 CASP8Q14790 479 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 NONOQ15233 471 aaKnown RBP eCLIP18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 LRRC15Q8TF66 581 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 EEF2KMTQ96G04 330 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 TTYH3Q9C0H2 523 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 ZNF831Q5JPB2 1677 aa18.45■□□□□ 0.54
SEMA3B-207ENST00000441915 CAPN2P17655 700 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 TM4SF1P30408 202 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 ASIC1P78348 528 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 CCDC170Q8IYT3 715 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 CNOT6LQ96LI5 555 aaKnown RBP18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 SPZ1Q9BXG8 430 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 C6orf50Q9HD87 102 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 RASA1P20936 1047 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 MTIF2P46199 727 aaKnown RBP18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 PPP4CP60510 307 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 ZBED6P86452 979 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 STK4Q13043 487 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 PCMTD1Q96MG8 357 aaPredicted RBP18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 C7orf25Q9BPX7 421 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 VPS18Q9P253 973 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 HDAC6Q9UBN7 1215 aa18.44■□□□□ 0.54
SEMA3B-207ENST00000441915 SMCO2A6NFE2 343 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 RPS6KA4O75676 772 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 ATP1A1P05023 1023 aaKnown RBP18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 LDHCP07864 332 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 ANKRD40Q6AI12 368 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 NEK8Q86SG6 692 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 JAKMIP2Q96AA8 810 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 NOC4LQ9BVI4 516 aaKnown RBP18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 NHEJ1Q9H9Q4 299 aaPredicted RBP18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 LMAN1P49257 510 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 HSP90B2PQ58FF3 399 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 PAPD7Q5XG87 772 aaKnown RBP18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 MAPKAPK5Q8IW41 473 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 ACBD3Q9H3P7 528 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 TFR2Q9UP52 801 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 MYH1P12882 1939 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 EIF3CLB5ME19 914 aaKnown RBP18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 MCM3P25205 808 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 SOGA3Q5TF21 947 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 CNNM4Q6P4Q7 775 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 RPGRIP1Q96KN7 1286 aa18.43■□□□□ 0.54
SEMA3B-207ENST00000441915 EIF3CQ99613 913 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms