RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 LRSAM1Q6UWE0 723 aa13.08□□□□□ -0.32
SMPD4P2-201ENST00000440167 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.08□□□□□ -0.32
SMPD4P2-201ENST00000440167 MOB2Q70IA6 237 aa13.08□□□□□ -0.32
SMPD4P2-201ENST00000440167 ZNF280CQ8ND82 737 aa13.08□□□□□ -0.32
SMPD4P2-201ENST00000440167 TBCKQ8TEA7 893 aa13.08□□□□□ -0.32
SMPD4P2-201ENST00000440167 WDR18Q9BV38 432 aa13.08□□□□□ -0.32
SMPD4P2-201ENST00000440167 TANGO6Q9C0B7 1094 aa13.08□□□□□ -0.32
SMPD4P2-201ENST00000440167 RANBP17Q9H2T7 1088 aaKnown RBP13.08□□□□□ -0.32
SMPD4P2-201ENST00000440167 PSTPIP2Q9H939 334 aa13.08□□□□□ -0.32
SMPD4P2-201ENST00000440167 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.32
SMPD4P2-201ENST00000440167 SNCAIPQ9Y6H5 919 aa13.08□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP17L15C9J2P7 530 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP17L13C9JLJ4 530 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP17L11C9JVI0 530 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP17L18D6R9N7 530 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP17L22D6RA61 530 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP17L17D6RBQ6 530 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP17L19D6RCP7 530 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP17L20D6RJB6 530 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 PLA2G6O60733 806 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 CMA1P23946 247 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 HMGCS2P54868 508 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 BACE1P56817 501 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 ATP2C1P98194 919 aaPredicted RBP13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP17L24Q0WX57 530 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 LETM2Q2VYF4 491 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP17L6PQ6QN14 398 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 FMR1NBQ8N0W7 255 aaPredicted RBP13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 ZC3H15Q8WU90 426 aaKnown RBP13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 LPAR1Q92633 364 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 CSRNP2Q9H175 543 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 TNMDQ9H2S6 317 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 SRPRBQ9Y5M8 271 aaKnown RBP13.07□□□□□ -0.32
SMPD4P2-201ENST00000440167 KINO60870 393 aaKnown RBP13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 BMP15O95972 392 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 MRPL12P52815 198 aaKnown RBP13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP14P54578 494 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 CKAP2LQ8IYA6 745 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 CNKSR2Q8WXI2 1034 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 SLF1Q9BQI6 1058 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 VWA3AA6NCI4 1184 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 SOCS7O14512 581 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 OPLAHO14841 1288 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 PPP1R12BO60237 982 aaPredicted RBP13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 CCNT1O60563 726 aaKnown RBP13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 LETM1O95202 739 aaPredicted RBP13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 NF2P35240 595 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 TTLL12Q14166 644 aaPredicted RBP13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 MAP3K11Q16584 847 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 NEK8Q86SG6 692 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 C4orf32Q8N8J7 132 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 TMEM60Q9H2L4 133 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 ELP3Q9H9T3 547 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 HPSEQ9Y251 543 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 AFG3L2Q9Y4W6 797 aa13.06□□□□□ -0.32
SMPD4P2-201ENST00000440167 MEIS2O14770 477 aa13.05□□□□□ -0.32
SMPD4P2-201ENST00000440167 FLOT1O75955 427 aa13.05□□□□□ -0.32
SMPD4P2-201ENST00000440167 ZNF202O95125 648 aa13.05□□□□□ -0.32
SMPD4P2-201ENST00000440167 IREB2P48200 963 aaKnown RBP13.05□□□□□ -0.32
SMPD4P2-201ENST00000440167 IL17AQ16552 155 aa13.05□□□□□ -0.32
SMPD4P2-201ENST00000440167 USP49Q70CQ1 688 aa13.05□□□□□ -0.32
SMPD4P2-201ENST00000440167 PNMA8AQ86V59 439 aaPredicted RBP13.05□□□□□ -0.32
SMPD4P2-201ENST00000440167 CLMNQ96JQ2 1002 aa13.05□□□□□ -0.32
SMPD4P2-201ENST00000440167 P2RX7Q99572 595 aaKnown RBP13.05□□□□□ -0.32
SMPD4P2-201ENST00000440167 CSADQ9Y600 493 aa13.05□□□□□ -0.32
SMPD4P2-201ENST00000440167 MORC2Q9Y6X9 1032 aaPredicted RBP13.05□□□□□ -0.32
SMPD4P2-201ENST00000440167 EDIL3O43854 480 aa13.04□□□□□ -0.32
SMPD4P2-201ENST00000440167 TDP2O95551 362 aa13.04□□□□□ -0.32
SMPD4P2-201ENST00000440167 SYKP43405 635 aa13.04□□□□□ -0.32
SMPD4P2-201ENST00000440167 FMR1Q06787 632 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMPD4P2-201ENST00000440167 MAP1SQ66K74 1059 aaPredicted RBP13.04□□□□□ -0.32
SMPD4P2-201ENST00000440167 PRPF38AQ8NAV1 312 aaKnown RBP13.04□□□□□ -0.32
SMPD4P2-201ENST00000440167 ERCC4Q92889 916 aaPredicted RBP13.04□□□□□ -0.32
SMPD4P2-201ENST00000440167 FERMT2Q96AC1 680 aa13.04□□□□□ -0.32
SMPD4P2-201ENST00000440167 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
SMPD4P2-201ENST00000440167 TSPY26PQ9H489 355 aa13.04□□□□□ -0.32
SMPD4P2-201ENST00000440167 ZNF536O15090 1300 aa13.04□□□□□ -0.32
SMPD4P2-201ENST00000440167 FAM237AA0A1B0GTK4 181 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 C19orf81C9J6K1 198 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 HOXA13P31271 388 aaPredicted RBP13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 POTEDQ86YR6 584 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 CPXCR1Q8N123 301 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 TBC1D5Q92609 795 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 EPSTI1Q96J88 318 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 C12orf42Q96LP6 360 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 FUCA2Q9BTY2 467 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 ANO3Q9BYT9 981 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 PANK2Q9BZ23 570 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 GLT8D2Q9H1C3 349 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 RBSNQ9H1K0 784 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 RRAGCQ9HB90 399 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 FAM13BQ9NYF5 915 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 KCNH3Q9ULD8 1083 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 CCPG1Q9ULG6 757 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms