RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ZNF512BQ96KM6 892 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 KREMEN1Q96MU8 473 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 FRMD6Q96NE9 622 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 FOXP3Q9BZS1 431 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 RNF19AQ9NV58 838 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 PARP2Q9UGN5 583 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 SFMBT1Q9UHJ3 866 aa4.66□□□□□ -1.66
HMGB1P12-201ENST00000438594 NOTOA8MTQ0 251 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 FKTNO75072 461 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 BPNT1O95861 308 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 EFEMP2O95967 443 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 LDHBP07195 334 aaKnown RBP4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 TFE3P19532 575 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 CDR1P51861 262 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 LMOD3Q0VAK6 560 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 SPATS1Q496A3 300 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 CCSAPQ6IQ19 270 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 TMC4Q7Z404 712 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 PCGF5Q86SE9 256 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 PHACTR4Q8IZ21 702 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 SDR16C5Q8N3Y7 309 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 MZB1Q8WU39 189 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 TEPSINQ96N21 525 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 PWWP2AQ96N64 755 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 G6PC3Q9BUM1 346 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 EPB41L4AQ9HCS5 686 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 MAP3K20Q9NYL2 800 aaKnown RBP4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 TLR6Q9Y2C9 796 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 INPP5FQ9Y2H2 1132 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 EID1Q9Y6B2 187 aa4.65□□□□□ -1.67
HMGB1P12-201ENST00000438594 ZC3H12DA2A288 527 aaKnown RBP4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 PPP1R12AO14974 1030 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 EPB41L2O43491 1005 aaKnown RBP4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 NRDCO43847 1150 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 LDHAP00338 332 aaKnown RBP4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 GBP1P32455 592 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 GNALP38405 381 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 ZNF280DQ6N043 979 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 RNF111Q6ZNA4 994 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 TMC6Q7Z403 805 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 RAVER1Q8IY67 606 aaKnown RBP4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 TMEFF1Q8IYR6 380 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 MAP6Q96JE9 813 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 CCDC74BQ96LY2 380 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 GPR20Q99678 358 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 DUSP9Q99956 384 aaKnown RBP4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 ASPNQ9BXN1 380 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 TMX4Q9H1E5 349 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 MRS2Q9HD23 443 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 CRTAC1Q9NQ79 661 aa4.64□□□□□ -1.67
HMGB1P12-201ENST00000438594 NUDT19A8MXV4 375 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 HRKO00198 91 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 ABLIM1O14639 778 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 SORBS3O60504 671 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 FGAP02671 866 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 MPOP05164 745 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 PNLIPP16233 465 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 NCKAP1LP55160 1127 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 PCBP3P57721 371 aaKnown RBP4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 RBM10P98175 930 aaKnown RBP4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 NMIQ13287 307 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 SAFB2Q14151 953 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 RAB3GAP1Q15042 981 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 FAM129CQ86XR2 697 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 PRPF38AQ8NAV1 312 aaKnown RBP4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 TSR2Q969E8 191 aaKnown RBP4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 LUC7LQ9NQ29 371 aaKnown RBP4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 VTI1BQ9UEU0 232 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 DDX41Q9UJV9 622 aaKnown RBP4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 TCFL5Q9UL49 500 aa4.63□□□□□ -1.67
HMGB1P12-201ENST00000438594 CHURC1-FNTBB4DL54 471 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 F6X3S4 739 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 IFRD1O00458 451 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 IRS4O14654 1257 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 CILPO75339 1184 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 PRPF40AO75400 957 aaKnown RBP4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 SYPP08247 313 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 CD53P19397 219 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 GNA15P30679 374 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 ARL4AP40617 200 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 KIR2DL1P43626 348 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 KIR2DL2P43627 348 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 RTP1P59025 263 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 RACK1P63244 317 aaKnown RBP4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 DAB2P98082 770 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 KIR3DS1Q14943 382 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 RTP5Q14D33 572 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 ZNF394Q53GI3 561 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 ZPBP2Q6X784 338 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 FERMT3Q86UX7 667 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 LDHDQ86WU2 507 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 USHBP1Q8N6Y0 703 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 LINC01356Q8N9X3 169 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 MKL1Q969V6 931 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 HHIPL1Q96JK4 782 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 KIF2CQ99661 725 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 APBA2Q99767 749 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 INO80BQ9C086 356 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 PALD1Q9ULE6 856 aa4.62□□□□□ -1.67
HMGB1P12-201ENST00000438594 TAF6LQ9Y6J9 622 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms