RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 SLC17A8Q8NDX2 589 aa26.36■■□□□ 1.81
HMG20B-205ENST00000435022 FAM161BQ96MY7 647 aa26.36■■□□□ 1.81
HMG20B-205ENST00000435022 TOX2Q96NM4 488 aa26.36■■□□□ 1.81
HMG20B-205ENST00000435022 TOMM22Q9NS69 142 aa26.36■■□□□ 1.81
HMG20B-205ENST00000435022 TCP11L1Q9NUJ3 509 aa26.36■■□□□ 1.81
HMG20B-205ENST00000435022 FRMPD2Q68DX3 1309 aaPredicted RBP26.36■■□□□ 1.81
HMG20B-205ENST00000435022 TRIM6-TRIM34B2RNG4 842 aa26.35■■□□□ 1.81
HMG20B-205ENST00000435022 EXOC6Q8TAG9 804 aa26.35■■□□□ 1.81
HMG20B-205ENST00000435022 NUP133Q8WUM0 1156 aa26.35■■□□□ 1.81
HMG20B-205ENST00000435022 RILPL2Q969X0 211 aa26.35■■□□□ 1.81
HMG20B-205ENST00000435022 TBX21Q9UL17 535 aa26.35■■□□□ 1.81
HMG20B-205ENST00000435022 CCPG1Q9ULG6 757 aa26.35■■□□□ 1.81
HMG20B-205ENST00000435022 GNEQ9Y223 722 aaKnown RBP26.35■■□□□ 1.81
HMG20B-205ENST00000435022 NEDD4P46934 1319 aa26.35■■□□□ 1.81
HMG20B-205ENST00000435022 ICAM1P05362 532 aa26.34■■□□□ 1.81
HMG20B-205ENST00000435022 TOP1P11387 765 aaKnown RBP26.34■■□□□ 1.81
HMG20B-205ENST00000435022 SDSP20132 328 aa26.34■■□□□ 1.81
HMG20B-205ENST00000435022 BEX3Q00994 111 aa26.34■■□□□ 1.81
HMG20B-205ENST00000435022 CHD1LQ86WJ1 897 aa26.34■■□□□ 1.81
HMG20B-205ENST00000435022 OSBPL3Q9H4L5 887 aa26.34■■□□□ 1.81
HMG20B-205ENST00000435022 PDGFCQ9NRA1 345 aa26.34■■□□□ 1.81
HMG20B-205ENST00000435022 ELP1O95163 1332 aa26.34■■□□□ 1.81
HMG20B-205ENST00000435022 PDHBP11177 359 aa26.33■■□□□ 1.81
HMG20B-205ENST00000435022 RAG1P15918 1043 aa26.33■■□□□ 1.81
HMG20B-205ENST00000435022 NUCB1Q02818 461 aa26.33■■□□□ 1.81
HMG20B-205ENST00000435022 SYDE2Q5VT97 1194 aa26.33■■□□□ 1.81
HMG20B-205ENST00000435022 TAPT1Q6NXT6 567 aa26.33■■□□□ 1.81
HMG20B-205ENST00000435022 GPCPD1Q9NPB8 672 aa26.33■■□□□ 1.81
HMG20B-205ENST00000435022 TMEM39AQ9NV64 488 aa26.33■■□□□ 1.81
HMG20B-205ENST00000435022 NFIBO00712 420 aa26.32■■□□□ 1.8
HMG20B-205ENST00000435022 TNFAIP2Q03169 654 aa26.32■■□□□ 1.8
HMG20B-205ENST00000435022 AAMPQ13685 434 aa26.32■■□□□ 1.8
HMG20B-205ENST00000435022 GNASQ5JWF2 1037 aa26.32■■□□□ 1.8
HMG20B-205ENST00000435022 AKNAD1Q5T1N1 836 aa26.32■■□□□ 1.8
HMG20B-205ENST00000435022 NSMFQ6X4W1 530 aa26.32■■□□□ 1.8
HMG20B-205ENST00000435022 FBXO16Q8IX29 292 aaPredicted RBP26.32■■□□□ 1.8
HMG20B-205ENST00000435022 MORC4Q8TE76 937 aa26.32■■□□□ 1.8
HMG20B-205ENST00000435022 GLT1D1Q96MS3 346 aa26.32■■□□□ 1.8
HMG20B-205ENST00000435022 ASB14A6NK59 587 aa26.31■■□□□ 1.8
HMG20B-205ENST00000435022 SNHG28P0DPA3 235 aa26.31■■□□□ 1.8
HMG20B-205ENST00000435022 SMPD1P17405 629 aa26.31■■□□□ 1.8
HMG20B-205ENST00000435022 PCSK9Q8NBP7 692 aaKnown RBP26.31■■□□□ 1.8
HMG20B-205ENST00000435022 RWDD1Q9H446 243 aaPredicted RBP26.31■■□□□ 1.8
HMG20B-205ENST00000435022 DCDC2CA8MYV0 355 aa26.3■■□□□ 1.8
HMG20B-205ENST00000435022 FPGSQ05932 587 aa26.3■■□□□ 1.8
HMG20B-205ENST00000435022 EEPD1Q7L9B9 569 aa26.3■■□□□ 1.8
HMG20B-205ENST00000435022 TLK2Q86UE8 772 aa26.3■■□□□ 1.8
HMG20B-205ENST00000435022 FAM126BQ8IXS8 530 aa26.3■■□□□ 1.8
HMG20B-205ENST00000435022 TTYH1Q9H313 450 aaPredicted RBP26.3■■□□□ 1.8
HMG20B-205ENST00000435022 A0A0U1RQG5 324 aaPredicted RBP26.29■■□□□ 1.8
HMG20B-205ENST00000435022 ARVCFO00192 962 aa26.29■■□□□ 1.8
HMG20B-205ENST00000435022 SMAD3P84022 425 aaKnown RBP26.29■■□□□ 1.8
HMG20B-205ENST00000435022 ZNF543Q08ER8 600 aa26.29■■□□□ 1.8
HMG20B-205ENST00000435022 BAATQ14032 418 aaPredicted RBP26.29■■□□□ 1.8
HMG20B-205ENST00000435022 SLC30A10Q6XR72 485 aa26.29■■□□□ 1.8
HMG20B-205ENST00000435022 CLEC4DQ8WXI8 215 aa26.29■■□□□ 1.8
HMG20B-205ENST00000435022 SPC25Q9HBM1 224 aa26.29■■□□□ 1.8
HMG20B-205ENST00000435022 TIMP1P01033 207 aa26.28■■□□□ 1.8
HMG20B-205ENST00000435022 ZNF697Q5TEC3 545 aa26.28■■□□□ 1.8
HMG20B-205ENST00000435022 CXCL17Q6UXB2 119 aa26.28■■□□□ 1.8
HMG20B-205ENST00000435022 MFSD6Q6ZSS7 791 aa26.28■■□□□ 1.8
HMG20B-205ENST00000435022 SLC43A3Q8NBI5 491 aa26.28■■□□□ 1.8
HMG20B-205ENST00000435022 RNPC3Q96LT9 517 aaKnown RBP26.28■■□□□ 1.8
HMG20B-205ENST00000435022 ZKSCAN3Q9BRR0 538 aa26.28■■□□□ 1.8
HMG20B-205ENST00000435022 IL25Q9H293 177 aa26.28■■□□□ 1.8
HMG20B-205ENST00000435022 GRIN2DO15399 1336 aa26.28■■□□□ 1.8
HMG20B-205ENST00000435022 C16orf59Q7L2K0 433 aa26.27■■□□□ 1.8
HMG20B-205ENST00000435022 CPVLQ9H3G5 476 aa26.27■■□□□ 1.8
HMG20B-205ENST00000435022 CD4P01730 458 aa26.26■■□□□ 1.79
HMG20B-205ENST00000435022 PCP11498 1178 aaKnown RBP26.26■■□□□ 1.79
HMG20B-205ENST00000435022 ALDH5A1P51649 535 aaPredicted RBP26.26■■□□□ 1.79
HMG20B-205ENST00000435022 CWC27Q6UX04 472 aaKnown RBP26.26■■□□□ 1.79
HMG20B-205ENST00000435022 TTC14Q96N46 770 aa26.26■■□□□ 1.79
HMG20B-205ENST00000435022 SEMA6BQ9H3T3 888 aa26.26■■□□□ 1.79
HMG20B-205ENST00000435022 MROH7Q68CQ1 1323 aa26.25■■□□□ 1.79
HMG20B-205ENST00000435022 FSCN1Q16658 493 aaKnown RBP26.25■■□□□ 1.79
HMG20B-205ENST00000435022 MFSD5Q6N075 450 aa26.25■■□□□ 1.79
HMG20B-205ENST00000435022 NOL8Q76FK4 1167 aaKnown RBP26.25■■□□□ 1.79
HMG20B-205ENST00000435022 VTI1AQ96AJ9 217 aa26.25■■□□□ 1.79
HMG20B-205ENST00000435022 CDX2Q99626 313 aaPredicted RBP26.25■■□□□ 1.79
HMG20B-205ENST00000435022 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.25■■□□□ 1.796e-8■■□□□ 11.7
HMG20B-205ENST00000435022 VTA1Q9NP79 307 aa26.25■■□□□ 1.79
HMG20B-205ENST00000435022 CDH23Q9H251 3354 aa26.24■■□□□ 1.79
HMG20B-205ENST00000435022 DYNC1LI2O43237 492 aaPredicted RBP26.24■■□□□ 1.79
HMG20B-205ENST00000435022 GOLGA8HP0CJ92 632 aa26.24■■□□□ 1.79
HMG20B-205ENST00000435022 A0A0C4DFX4 3053 aa26.23■■□□□ 1.79
HMG20B-205ENST00000435022 UMODL1Q5DID0 1318 aa26.23■■□□□ 1.79
HMG20B-205ENST00000435022 CSF2RAP15509 400 aa26.23■■□□□ 1.79
HMG20B-205ENST00000435022 IQSEC1Q6DN90 963 aa26.23■■□□□ 1.79
HMG20B-205ENST00000435022 ESR2Q92731 530 aa26.23■■□□□ 1.79
HMG20B-205ENST00000435022 PPP1R12CQ9BZL4 782 aa26.23■■□□□ 1.79
HMG20B-205ENST00000435022 EYSQ5T1H1 3165 aa26.23■■□□□ 1.79
HMG20B-205ENST00000435022 WDR19Q8NEZ3 1342 aa26.22■■□□□ 1.79
HMG20B-205ENST00000435022 UNC80Q8N2C7 3258 aa26.22■■□□□ 1.79
HMG20B-205ENST00000435022 PTPDC1A2A3K4 754 aa26.22■■□□□ 1.79
HMG20B-205ENST00000435022 DLL1O00548 723 aa26.22■■□□□ 1.79
HMG20B-205ENST00000435022 KDM4AO75164 1064 aa26.22■■□□□ 1.79
HMG20B-205ENST00000435022 PDE4AP27815 886 aa26.22■■□□□ 1.79
HMG20B-205ENST00000435022 MFAP1P55081 439 aaKnown RBP26.22■■□□□ 1.79
HMG20B-205ENST00000435022 PSMC6P62333 389 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms