RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ARHGAP29Q52LW3 1261 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 LDLRAD1Q5T700 205 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 MCTP2Q6DN12 878 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 CCDC83Q8IWF9 413 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 REXO1L1PQ8IX06 675 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 ZNF280CQ8ND82 737 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 ANKS1AQ92625 1134 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 OPTNQ96CV9 577 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 SLC10A4Q96EP9 437 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 SH2D4AQ9H788 454 aa12.94□□□□□ -0.34
CECR3-201ENST00000428828 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.94□□□□□ -0.34
CECR3-201ENST00000428828 ABT1Q9ULW3 272 aaKnown RBP12.94□□□□□ -0.34
CECR3-201ENST00000428828 PHLPP2Q6ZVD8 1323 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 EFCAB8A8MWE9 144 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 USP17L10C9JJH3 530 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 DDAH1O94760 285 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 GOLGA8HP0CJ92 632 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 FSTL1Q12841 308 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 CCDC96Q2M329 555 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 USP17L2Q6R6M4 530 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 ERO1BQ86YB8 467 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 NUP88Q99567 741 aaPredicted RBP12.93□□□□□ -0.34
CECR3-201ENST00000428828 GOPCQ9HD26 462 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 IMPACTQ9P2X3 320 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 HPS5Q9UPZ3 1129 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 TMX2Q9Y320 296 aa12.93□□□□□ -0.34
CECR3-201ENST00000428828 COL11A1P12107 1806 aaPredicted RBP12.92□□□□□ -0.34
CECR3-201ENST00000428828 CCDC196A0A1B0GTZ2 297 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 SPDYE5A6NIY4 337 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 F5H6K3 240 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 CCP110O43303 1012 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 FIBPO43427 364 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 OAS2P29728 719 aaKnown RBP12.92□□□□□ -0.34
CECR3-201ENST00000428828 GYS2P54840 703 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 HMGCS2P54868 508 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 KLRC3Q07444 240 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 SCRN1Q12765 414 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 TROAPQ12815 778 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 SMC1AQ14683 1233 aaKnown RBP12.92□□□□□ -0.34
CECR3-201ENST00000428828 RTN1Q16799 776 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 ANO6Q4KMQ2 910 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 KIAA1755Q5JYT7 1200 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 SLFN13Q68D06 897 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 CMTR1Q8N1G2 835 aaKnown RBP12.92□□□□□ -0.34
CECR3-201ENST00000428828 CTCFLQ8NI51 663 aaPredicted RBP12.92□□□□□ -0.34
CECR3-201ENST00000428828 UBXN4Q92575 508 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 MKL1Q969V6 931 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 ZNF274Q96GC6 653 aaPredicted RBP12.92□□□□□ -0.34
CECR3-201ENST00000428828 ZSCAN31Q96LW9 406 aaPredicted RBP12.92□□□□□ -0.34
CECR3-201ENST00000428828 AFG3L2Q9Y4W6 797 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 USP27XA6NNY8 438 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 IRF6O14896 467 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 NDUFB10O96000 172 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 PDHBP11177 359 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 CDC27P30260 824 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 EVCP57679 992 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 CORO7P57737 925 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 SNW1Q13573 536 aaKnown RBP12.92□□□□□ -0.34
CECR3-201ENST00000428828 LEKR1Q6ZMV7 388 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 MMS22LQ6ZRQ5 1243 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 KCTD1Q719H9 257 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 PACS2Q86VP3 889 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 FANCBQ8NB91 859 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 WDR18Q9BV38 432 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 CXorf56Q9H5V9 222 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 VCPKMTQ9H867 229 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 GPCPD1Q9NPB8 672 aa12.92□□□□□ -0.34
CECR3-201ENST00000428828 SH2B1Q9NRF2 756 aaPredicted RBP12.92□□□□□ -0.34
CECR3-201ENST00000428828 TMEM88BA6NKF7 163 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 POLR3GO15318 223 aaPredicted RBP12.91□□□□□ -0.34
CECR3-201ENST00000428828 PFKFB2O60825 505 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 TBC1D8O95759 1140 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 PARP1P09874 1014 aaKnown RBP12.91□□□□□ -0.34
CECR3-201ENST00000428828 CALM1P0DP23 149 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 CALM2P0DP24 149 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 CALM3P0DP25 149 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 ADD1P35611 737 aaKnown RBP12.91□□□□□ -0.34
CECR3-201ENST00000428828 SLC1A4P43007 532 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 BACE1P56817 501 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 PPATQ06203 517 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 ST3GAL1Q11201 340 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 GRM1Q13255 1194 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 JAKMIP3Q5VZ66 844 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
CECR3-201ENST00000428828 SAPCD2Q86UD0 394 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 STAG2Q8N3U4 1231 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 GMCL1P1Q8NEA9 526 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 CPVLQ9H3G5 476 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 CLSTN2Q9H4D0 955 aa12.91□□□□□ -0.34
CECR3-201ENST00000428828 CPLX1O14810 134 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 PLEKHA8P1O95397 391 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 GJA5P36382 358 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 ZNF165P49910 485 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 ZNF157P51786 506 aaPredicted RBP12.9□□□□□ -0.34
CECR3-201ENST00000428828 GRM4Q14833 912 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 FAM83BQ5T0W9 1011 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 GADL1Q6ZQY3 521 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 WNK4Q96J92 1243 aa12.9□□□□□ -0.34
CECR3-201ENST00000428828 FAM107BQ9H098 131 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms