RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ASGR1P07306 291 aa18.33■□□□□ 0.52
SEC13-210ENST00000428626 SDSP20132 328 aa18.33■□□□□ 0.52
SEC13-210ENST00000428626 CDK7P50613 346 aa18.33■□□□□ 0.52
SEC13-210ENST00000428626 NUCB1Q02818 461 aa18.33■□□□□ 0.52
SEC13-210ENST00000428626 FAM109BQ6ICB4 259 aaPredicted RBP18.33■□□□□ 0.52
SEC13-210ENST00000428626 BTNL9Q6UXG8 535 aa18.33■□□□□ 0.52
SEC13-210ENST00000428626 CHD1LQ86WJ1 897 aa18.33■□□□□ 0.52
SEC13-210ENST00000428626 FAM161BQ96MY7 647 aa18.33■□□□□ 0.52
SEC13-210ENST00000428626 TOX2Q96NM4 488 aa18.33■□□□□ 0.52
SEC13-210ENST00000428626 RANBP17Q9H2T7 1088 aaKnown RBP18.33■□□□□ 0.52
SEC13-210ENST00000428626 PDGFCQ9NRA1 345 aa18.33■□□□□ 0.52
SEC13-210ENST00000428626 TCP11L1Q9NUJ3 509 aa18.33■□□□□ 0.52
SEC13-210ENST00000428626 NEDD4P46934 1319 aa18.32■□□□□ 0.52
SEC13-210ENST00000428626 ICAM1P05362 532 aa18.32■□□□□ 0.52
SEC13-210ENST00000428626 TOP1P11387 765 aaKnown RBP18.32■□□□□ 0.52
SEC13-210ENST00000428626 NKX3-2P78367 333 aa18.32■□□□□ 0.52
SEC13-210ENST00000428626 BEX3Q00994 111 aa18.32■□□□□ 0.52
SEC13-210ENST00000428626 TICAM2Q86XR7 235 aa18.32■□□□□ 0.52
SEC13-210ENST00000428626 NUP133Q8WUM0 1156 aa18.32■□□□□ 0.52
SEC13-210ENST00000428626 RWDD1Q9H446 243 aaPredicted RBP18.32■□□□□ 0.52
SEC13-210ENST00000428626 OSBPL3Q9H4L5 887 aa18.32■□□□□ 0.52
SEC13-210ENST00000428626 GPCPD1Q9NPB8 672 aa18.32■□□□□ 0.52
SEC13-210ENST00000428626 TMEM39AQ9NV64 488 aa18.32■□□□□ 0.52
SEC13-210ENST00000428626 TBX21Q9UL17 535 aa18.32■□□□□ 0.52
SEC13-210ENST00000428626 CCPG1Q9ULG6 757 aa18.32■□□□□ 0.52
SEC13-210ENST00000428626 GNEQ9Y223 722 aaKnown RBP18.32■□□□□ 0.52
SEC13-210ENST00000428626 NFIBO00712 420 aa18.31■□□□□ 0.52
SEC13-210ENST00000428626 PDHBP11177 359 aa18.31■□□□□ 0.52
SEC13-210ENST00000428626 RAG1P15918 1043 aa18.31■□□□□ 0.52
SEC13-210ENST00000428626 GNASQ5JWF2 1037 aa18.31■□□□□ 0.52
SEC13-210ENST00000428626 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
SEC13-210ENST00000428626 SYDE2Q5VT97 1194 aa18.31■□□□□ 0.52
SEC13-210ENST00000428626 TAPT1Q6NXT6 567 aa18.31■□□□□ 0.52
SEC13-210ENST00000428626 NSMFQ6X4W1 530 aa18.31■□□□□ 0.52
SEC13-210ENST00000428626 EEPD1Q7L9B9 569 aa18.31■□□□□ 0.52
SEC13-210ENST00000428626 CUL9Q8IWT3 2517 aa18.31■□□□□ 0.52
SEC13-210ENST00000428626 ELP1O95163 1332 aa18.3■□□□□ 0.52
SEC13-210ENST00000428626 ASB14A6NK59 587 aa18.3■□□□□ 0.52
SEC13-210ENST00000428626 SMPD1P17405 629 aa18.3■□□□□ 0.52
SEC13-210ENST00000428626 TNFAIP2Q03169 654 aa18.3■□□□□ 0.52
SEC13-210ENST00000428626 AAMPQ13685 434 aa18.3■□□□□ 0.52
SEC13-210ENST00000428626 FBXO16Q8IX29 292 aaPredicted RBP18.3■□□□□ 0.52
SEC13-210ENST00000428626 MORC4Q8TE76 937 aa18.3■□□□□ 0.52
SEC13-210ENST00000428626 GLT1D1Q96MS3 346 aa18.3■□□□□ 0.52
SEC13-210ENST00000428626 UNC80Q8N2C7 3258 aa18.3■□□□□ 0.52
SEC13-210ENST00000428626 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
SEC13-210ENST00000428626 EYSQ5T1H1 3165 aa18.3■□□□□ 0.52
SEC13-210ENST00000428626 DCDC2CA8MYV0 355 aa18.29■□□□□ 0.52
SEC13-210ENST00000428626 SNHG28P0DPA3 235 aa18.29■□□□□ 0.52
SEC13-210ENST00000428626 BAATQ14032 418 aaPredicted RBP18.29■□□□□ 0.52
SEC13-210ENST00000428626 MFSD6Q6ZSS7 791 aa18.29■□□□□ 0.52
SEC13-210ENST00000428626 PCSK9Q8NBP7 692 aaKnown RBP18.29■□□□□ 0.52
SEC13-210ENST00000428626 CLEC4DQ8WXI8 215 aa18.29■□□□□ 0.52
SEC13-210ENST00000428626 ZKSCAN3Q9BRR0 538 aa18.29■□□□□ 0.52
SEC13-210ENST00000428626 IL25Q9H293 177 aa18.29■□□□□ 0.52
SEC13-210ENST00000428626 TTYH1Q9H313 450 aaPredicted RBP18.29■□□□□ 0.52
SEC13-210ENST00000428626 CPVLQ9H3G5 476 aa18.29■□□□□ 0.52
SEC13-210ENST00000428626 GRIN2DO15399 1336 aa18.28■□□□□ 0.52
SEC13-210ENST00000428626 ARVCFO00192 962 aa18.28■□□□□ 0.52
SEC13-210ENST00000428626 FPGSQ05932 587 aa18.28■□□□□ 0.52
SEC13-210ENST00000428626 ZNF543Q08ER8 600 aa18.28■□□□□ 0.52
SEC13-210ENST00000428626 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
SEC13-210ENST00000428626 CXCL17Q6UXB2 119 aa18.28■□□□□ 0.52
SEC13-210ENST00000428626 SLC30A10Q6XR72 485 aa18.28■□□□□ 0.52
SEC13-210ENST00000428626 C16orf59Q7L2K0 433 aa18.28■□□□□ 0.52
SEC13-210ENST00000428626 TLK2Q86UE8 772 aa18.28■□□□□ 0.52
SEC13-210ENST00000428626 FAM126BQ8IXS8 530 aa18.28■□□□□ 0.52
SEC13-210ENST00000428626 SPC25Q9HBM1 224 aa18.28■□□□□ 0.52
SEC13-210ENST00000428626 A0A0U1RQG5 324 aaPredicted RBP18.27■□□□□ 0.52
SEC13-210ENST00000428626 TIMP1P01033 207 aa18.27■□□□□ 0.52
SEC13-210ENST00000428626 SMAD3P84022 425 aaKnown RBP18.27■□□□□ 0.52
SEC13-210ENST00000428626 ZNF697Q5TEC3 545 aa18.27■□□□□ 0.52
SEC13-210ENST00000428626 NOL8Q76FK4 1167 aaKnown RBP18.27■□□□□ 0.52
SEC13-210ENST00000428626 VTI1AQ96AJ9 217 aa18.27■□□□□ 0.52
SEC13-210ENST00000428626 RNPC3Q96LT9 517 aaKnown RBP18.27■□□□□ 0.52
SEC13-210ENST00000428626 TTC14Q96N46 770 aa18.27■□□□□ 0.52
SEC13-210ENST00000428626 SEMA6BQ9H3T3 888 aa18.27■□□□□ 0.52
SEC13-210ENST00000428626 DYNC1LI2O43237 492 aaPredicted RBP18.26■□□□□ 0.51
SEC13-210ENST00000428626 CD4P01730 458 aa18.26■□□□□ 0.51
SEC13-210ENST00000428626 GOLGA8HP0CJ92 632 aa18.26■□□□□ 0.51
SEC13-210ENST00000428626 ALDH5A1P51649 535 aaPredicted RBP18.26■□□□□ 0.51
SEC13-210ENST00000428626 FSCN1Q16658 493 aaKnown RBP18.26■□□□□ 0.51
SEC13-210ENST00000428626 SLC43A3Q8NBI5 491 aa18.26■□□□□ 0.51
SEC13-210ENST00000428626 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.26■□□□□ 0.517e-14■■■□□ 15.6
SEC13-210ENST00000428626 PCP11498 1178 aaKnown RBP18.25■□□□□ 0.51
SEC13-210ENST00000428626 PDE4AP27815 886 aa18.25■□□□□ 0.51
SEC13-210ENST00000428626 IQSEC1Q6DN90 963 aa18.25■□□□□ 0.51
SEC13-210ENST00000428626 MFSD5Q6N075 450 aa18.25■□□□□ 0.51
SEC13-210ENST00000428626 CDX2Q99626 313 aaPredicted RBP18.25■□□□□ 0.51
SEC13-210ENST00000428626 UBA5Q9GZZ9 404 aa18.25■□□□□ 0.51
SEC13-210ENST00000428626 VTA1Q9NP79 307 aa18.25■□□□□ 0.51
SEC13-210ENST00000428626 UMODL1Q5DID0 1318 aa18.24■□□□□ 0.51
SEC13-210ENST00000428626 MROH7Q68CQ1 1323 aa18.24■□□□□ 0.51
SEC13-210ENST00000428626 PTPDC1A2A3K4 754 aa18.24■□□□□ 0.51
SEC13-210ENST00000428626 DLL1O00548 723 aa18.24■□□□□ 0.51
SEC13-210ENST00000428626 ZNF213O14771 459 aa18.24■□□□□ 0.51
SEC13-210ENST00000428626 KDM4AO75164 1064 aa18.24■□□□□ 0.51
SEC13-210ENST00000428626 CSF2RAP15509 400 aa18.24■□□□□ 0.51
SEC13-210ENST00000428626 PSMC6P62333 389 aa18.24■□□□□ 0.51
SEC13-210ENST00000428626 KIAA1211Q6ZU35 1233 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms