RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 HOMER3Q9NSC5 361 aa13.83□□□□□ -0.2
FGFR1-211ENST00000425967 LEMD3Q9Y2U8 911 aa13.83□□□□□ -0.2
FGFR1-211ENST00000425967 USH1CQ9Y6N9 552 aa13.83□□□□□ -0.2
FGFR1-211ENST00000425967 IFRD2Q12894 506 aaPredicted RBP13.82□□□□□ -0.2
FGFR1-211ENST00000425967 GPATCH4Q5T3I0 446 aaKnown RBP13.82□□□□□ -0.2
FGFR1-211ENST00000425967 MAP3K21Q5TCX8 1036 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 USPL1Q5W0Q7 1092 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 RSPH3Q86UC2 560 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 PNMA8AQ86V59 439 aaPredicted RBP13.82□□□□□ -0.2
FGFR1-211ENST00000425967 TYW1Q9NV66 732 aaKnown RBP13.82□□□□□ -0.2
FGFR1-211ENST00000425967 RABGAP1Q9Y3P9 1069 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 ESYT2A0FGR8 921 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 TTC36A6NLP5 189 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 FGAP02671 866 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 RPN1P04843 607 aaKnown RBP13.82□□□□□ -0.2
FGFR1-211ENST00000425967 NSFP46459 744 aaKnown RBP13.82□□□□□ -0.2
FGFR1-211ENST00000425967 TMC4Q7Z404 712 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 DPP9Q86TI2 863 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 BBOF1Q8ND07 529 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.82□□□□□ -0.2
FGFR1-211ENST00000425967 SEPT10Q9P0V9 454 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 BLMP54132 1417 aaPredicted RBP13.82□□□□□ -0.2
FGFR1-211ENST00000425967 KIF3CO14782 793 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 H2AFZP0C0S5 128 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 POLR2FP61218 127 aaKnown RBP13.82□□□□□ -0.2
FGFR1-211ENST00000425967 RINT1Q6NUQ1 792 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 H2AFVQ71UI9 128 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 MAP7D3Q8IWC1 876 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 NME8Q8N427 588 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 ATP6V0A1Q93050 837 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 IPO11Q9UI26 975 aaKnown RBP13.82□□□□□ -0.2
FGFR1-211ENST00000425967 USP14P54578 494 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 IGBP1P78318 339 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 USP28Q96RU2 1077 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 ANKFY1Q9P2R3 1169 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 KIAA0556O60303 1618 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 MAST1Q9Y2H9 1570 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 ABCC2Q92887 1545 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 RBBP5Q15291 538 aaKnown RBP13.82□□□□□ -0.2
FGFR1-211ENST00000425967 IL17REQ8NFR9 667 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 POMGNT1Q8WZA1 660 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 ZSWIM6Q9HCJ5 1215 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 NUB1Q9Y5A7 615 aa13.82□□□□□ -0.2
FGFR1-211ENST00000425967 ABCC4O15439 1325 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 LAD1O00515 517 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 PPEF1O14829 653 aaPredicted RBP13.81□□□□□ -0.2
FGFR1-211ENST00000425967 PDE8BO95263 885 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 PIK3CAP42336 1068 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 PTH1RQ03431 593 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 BFSP1Q12934 665 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 CCDC13Q8IYE1 715 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 MGARPQ8TDB4 240 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 TMEM2Q9UHN6 1383 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 LOC102724428A0A0B4J2F2 783 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 KCNQ3O43525 872 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 PTPREP23469 700 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 SIK1P57059 783 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 PTK2Q05397 1052 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 LRRC24Q50LG9 513 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 ASPRV1Q53RT3 343 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 NCAPGQ9BPX3 1015 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 SLC39A2Q9NP94 309 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 A6NJR5 290 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 SMAP1Q8IYB5 467 aaPredicted RBP13.81□□□□□ -0.2
FGFR1-211ENST00000425967 ABI1Q8IZP0 508 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 PALD1Q9ULE6 856 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 SOS2Q07890 1332 aaPredicted RBP13.81□□□□□ -0.2
FGFR1-211ENST00000425967 GSTA1P08263 222 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 GSTA2P09210 222 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 TCP1P17987 556 aaKnown RBP13.81□□□□□ -0.2
FGFR1-211ENST00000425967 OSBPP22059 807 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 MFAP3P55082 362 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 BRD3Q15059 726 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 ODR4Q5SWX8 454 aa13.81□□□□□ -0.2
FGFR1-211ENST00000425967 BTBD18B2RXH4 712 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 GUCY2FP51841 1108 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 ARHGAP4P98171 946 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 SPATA1Q5VX52 437 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 EXOC8Q8IYI6 725 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 BBS5Q8N3I7 341 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 CUEDC2Q9H467 287 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 HAUS4Q9H6D7 363 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 PRPSAP1Q14558 356 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 FAM71BQ8TC56 605 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 TSC1Q92574 1164 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 SCYL1Q96KG9 808 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 RABEP2Q9H5N1 569 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 KLHL14Q9P2G3 628 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 HMGB1P1B2RPK0 211 aaPredicted RBP13.8□□□□□ -0.2
FGFR1-211ENST00000425967 TXNDC9O14530 226 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 CIAO1O76071 339 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 GARSP41250 739 aaKnown RBP13.8□□□□□ -0.2
FGFR1-211ENST00000425967 LRCH2Q5VUJ6 765 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 AP5M1Q9H0R1 490 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 IFT122Q9HBG6 1241 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 HNRNPDLO14979 420 aaKnown RBP13.8□□□□□ -0.2
FGFR1-211ENST00000425967 RBM6P78332 1123 aaKnown RBP13.8□□□□□ -0.2
FGFR1-211ENST00000425967 PTGDRQ13258 359 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 CCDC38Q502W7 563 aa13.8□□□□□ -0.2
FGFR1-211ENST00000425967 NXNQ6DKJ4 435 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms