RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 ASCC2Q9H1I8 757 aaPredicted RBP18.08■□□□□ 0.49
SCRN1-205ENST00000425819 GDPD2Q9HCC8 539 aa18.08■□□□□ 0.49
SCRN1-205ENST00000425819 TMEM260Q9NX78 707 aa18.08■□□□□ 0.49
SCRN1-205ENST00000425819 BIN2Q9UBW5 565 aaPredicted RBP18.08■□□□□ 0.49
SCRN1-205ENST00000425819 ADAMTS5Q9UNA0 930 aa18.08■□□□□ 0.49
SCRN1-205ENST00000425819 TMEM88BA6NKF7 163 aa18.08■□□□□ 0.48
SCRN1-205ENST00000425819 FIBPO43427 364 aa18.08■□□□□ 0.48
SCRN1-205ENST00000425819 MCM4P33991 863 aa18.08■□□□□ 0.48
SCRN1-205ENST00000425819 MRPL12P52815 198 aaKnown RBP18.08■□□□□ 0.48
SCRN1-205ENST00000425819 CEBPZQ03701 1054 aaKnown RBP18.08■□□□□ 0.48
SCRN1-205ENST00000425819 FSTL1Q12841 308 aa18.08■□□□□ 0.48
SCRN1-205ENST00000425819 PABPC4Q13310 644 aaKnown RBP eCLIP18.08■□□□□ 0.48
SCRN1-205ENST00000425819 NFKBIBQ15653 356 aa18.08■□□□□ 0.48
SCRN1-205ENST00000425819 JAKMIP3Q5VZ66 844 aa18.08■□□□□ 0.48
SCRN1-205ENST00000425819 REXO1Q8N1G1 1221 aaKnown RBP18.08■□□□□ 0.48
SCRN1-205ENST00000425819 REPS2Q8NFH8 660 aa18.08■□□□□ 0.48
SCRN1-205ENST00000425819 BRI3BPQ8WY22 251 aa18.08■□□□□ 0.48
SCRN1-205ENST00000425819 USP28Q96RU2 1077 aa18.08■□□□□ 0.48
SCRN1-205ENST00000425819 ABCB11O95342 1321 aa18.07■□□□□ 0.48
SCRN1-205ENST00000425819 CCDC194A0A1B0GVG4 234 aa18.07■□□□□ 0.48
SCRN1-205ENST00000425819 ALAS1P13196 640 aa18.07■□□□□ 0.48
SCRN1-205ENST00000425819 ATP2B1P20020 1258 aa18.07■□□□□ 0.48
SCRN1-205ENST00000425819 OSBPP22059 807 aa18.07■□□□□ 0.48
SCRN1-205ENST00000425819 MRPL11Q9Y3B7 192 aaKnown RBP18.07■□□□□ 0.48
SCRN1-205ENST00000425819 BTBD19C9JJ37 291 aa18.06■□□□□ 0.48
SCRN1-205ENST00000425819 OPLAHO14841 1288 aa18.06■□□□□ 0.48
SCRN1-205ENST00000425819 NBR1Q14596 966 aa18.06■□□□□ 0.48
SCRN1-205ENST00000425819 TMEM132BQ14DG7 1078 aa18.06■□□□□ 0.48
SCRN1-205ENST00000425819 USP17L6PQ6QN14 398 aa18.06■□□□□ 0.48
SCRN1-205ENST00000425819 KRT25Q7Z3Z0 450 aa18.06■□□□□ 0.48
SCRN1-205ENST00000425819 GLT8D2Q9H1C3 349 aa18.06■□□□□ 0.48
SCRN1-205ENST00000425819 HOMER2Q9NSB8 354 aa18.06■□□□□ 0.48
SCRN1-205ENST00000425819 RLFQ13129 1914 aa18.06■□□□□ 0.48
SCRN1-205ENST00000425819 PARP14Q460N5 1801 aa18.05■□□□□ 0.48
SCRN1-205ENST00000425819 GOLGA6L22H0YM25 854 aa18.05■□□□□ 0.48
SCRN1-205ENST00000425819 PEX10O60683 326 aa18.05■□□□□ 0.48
SCRN1-205ENST00000425819 TOB1P50616 345 aaPredicted RBP18.05■□□□□ 0.48
SCRN1-205ENST00000425819 HERVK_113P62684 666 aa18.05■□□□□ 0.48
SCRN1-205ENST00000425819 PLS1Q14651 629 aa18.05■□□□□ 0.48
SCRN1-205ENST00000425819 SNRNP48Q6IEG0 339 aaKnown RBP18.05■□□□□ 0.48
SCRN1-205ENST00000425819 POTEEQ6S8J3 1075 aa18.05■□□□□ 0.48
SCRN1-205ENST00000425819 PGBD1Q96JS3 809 aa18.05■□□□□ 0.48
SCRN1-205ENST00000425819 CFAP45Q9UL16 551 aa18.05■□□□□ 0.48
SCRN1-205ENST00000425819 ZNF214Q9UL59 606 aaPredicted RBP18.05■□□□□ 0.48
SCRN1-205ENST00000425819 CLIC4Q9Y696 253 aa18.05■□□□□ 0.48
SCRN1-205ENST00000425819 PDHXO00330 501 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 MEIS2O14770 477 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 SLC10A3P09131 477 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 HOXA13P31271 388 aaPredicted RBP18.04■□□□□ 0.48
SCRN1-205ENST00000425819 CLK2P49760 499 aaKnown RBP18.04■□□□□ 0.48
SCRN1-205ENST00000425819 OAZ1P54368 228 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 RILPL1Q5EBL4 403 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 ATL3Q6DD88 541 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 LBX2Q6XYB7 198 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 TBC1D5Q92609 795 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 PNMA2Q9UL42 364 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 NOL7Q9UMY1 257 aaKnown RBP18.04■□□□□ 0.48
SCRN1-205ENST00000425819 RIPK3Q9Y572 518 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 CFBP00751 764 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 CYP2C8P10632 490 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 NONOQ15233 471 aaKnown RBP eCLIP18.04■□□□□ 0.48
SCRN1-205ENST00000425819 INF2Q27J81 1249 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 MUM1L1Q5H9M0 696 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 ANO1Q5XXA6 986 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 ANKRD23Q86SG2 305 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 FAM43AQ8N2R8 423 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 CLEC4DQ8WXI8 215 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 SPATA32Q96LK8 384 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 TRERF1Q96PN7 1200 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 PAGR1Q9BTK6 254 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 TEX13BQ9BXU2 312 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 SCAND2PQ9GZW5 306 aaPredicted RBP18.04■□□□□ 0.48
SCRN1-205ENST00000425819 RTEL1Q9NZ71 1219 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 BTBD7Q9P203 1132 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 PNMA3Q9UL41 463 aa18.04■□□□□ 0.48
SCRN1-205ENST00000425819 NFIBO00712 420 aa18.03■□□□□ 0.48
SCRN1-205ENST00000425819 WNT7AO00755 349 aa18.03■□□□□ 0.48
SCRN1-205ENST00000425819 ATP2A1O14983 1001 aa18.03■□□□□ 0.48
SCRN1-205ENST00000425819 PRPF40AO75400 957 aaKnown RBP18.03■□□□□ 0.48
SCRN1-205ENST00000425819 STAT3P40763 770 aa18.03■□□□□ 0.48
SCRN1-205ENST00000425819 SF3A1Q15459 793 aaKnown RBP18.03■□□□□ 0.48
SCRN1-205ENST00000425819 PAXIP1Q6ZW49 1069 aaPredicted RBP18.03■□□□□ 0.48
SCRN1-205ENST00000425819 MB21D1Q8N884 522 aa18.03■□□□□ 0.48
SCRN1-205ENST00000425819 LEO1Q8WVC0 666 aaPredicted RBP18.03■□□□□ 0.48
SCRN1-205ENST00000425819 PTPN18Q99952 460 aa18.03■□□□□ 0.48
SCRN1-205ENST00000425819 RNF146Q9NTX7 359 aa18.03■□□□□ 0.48
SCRN1-205ENST00000425819 PCDHB6Q9Y5E3 794 aa18.03■□□□□ 0.48
SCRN1-205ENST00000425819 DDX11L8A8MPP1 907 aa18.02■□□□□ 0.48
SCRN1-205ENST00000425819 GCOM1H8Y6P7 765 aaPredicted RBP18.02■□□□□ 0.48
SCRN1-205ENST00000425819 POLR2MP0CAP2 368 aa18.02■□□□□ 0.48
SCRN1-205ENST00000425819 GRM1Q13255 1194 aa18.02■□□□□ 0.48
SCRN1-205ENST00000425819 TTC38Q5R3I4 469 aa18.02■□□□□ 0.48
SCRN1-205ENST00000425819 TBCKQ8TEA7 893 aa18.02■□□□□ 0.48
SCRN1-205ENST00000425819 CCDC102AQ96A19 550 aa18.02■□□□□ 0.48
SCRN1-205ENST00000425819 POLR3EQ9NVU0 708 aa18.02■□□□□ 0.48
SCRN1-205ENST00000425819 SLC45A1Q9Y2W3 748 aa18.02■□□□□ 0.48
SCRN1-205ENST00000425819 MANSC4A6NHS7 340 aaPredicted RBP18.01■□□□□ 0.47
SCRN1-205ENST00000425819 FAM155AB1AL88 458 aaPredicted RBP18.01■□□□□ 0.47
SCRN1-205ENST00000425819 PIK3CDO00329 1044 aa18.01■□□□□ 0.47
SCRN1-205ENST00000425819 CNMDO75829 334 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms