RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TACC1O75410 805 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 TCP1P17987 556 aaKnown RBP16.99■□□□□ 0.31
C9orf3-204ENST00000424143 NOP2P46087 812 aaKnown RBP16.99■□□□□ 0.31
C9orf3-204ENST00000424143 AMPD3Q01432 767 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 TBC1D8BQ0IIM8 1120 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 RCSD1Q6JBY9 416 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 SECISBP2LQ93073 1101 aaKnown RBP16.99■□□□□ 0.31
C9orf3-204ENST00000424143 DCP1AQ9NPI6 582 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-204ENST00000424143 TRIM10Q9UDY6 481 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 COL14A1Q05707 1796 aaKnown RBP16.99■□□□□ 0.31
C9orf3-204ENST00000424143 CCDC194A0A1B0GVG4 234 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 hCG_1642624A0A1W2PR95 340 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 OPA1O60313 960 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 ADAMTS2O95450 1211 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 FGFR1OPO95684 399 aaKnown RBP16.99■□□□□ 0.31
C9orf3-204ENST00000424143 TFRCP02786 760 aaKnown RBP16.99■□□□□ 0.31
C9orf3-204ENST00000424143 SMARCA1P28370 1054 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 PMS1P54277 932 aaKnown RBP16.99■□□□□ 0.31
C9orf3-204ENST00000424143 DYNLL1P63167 89 aaKnown RBP16.99■□□□□ 0.31
C9orf3-204ENST00000424143 PPFIA1Q13136 1202 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 SPA17Q15506 151 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 CNNM4Q6P4Q7 775 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 EMBQ6PCB8 327 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 CLEC4GQ6UXB4 293 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 C10orf67Q8IYJ2 551 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 CSGALNACT2Q8N6G5 542 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 FAM76AQ8TAV0 307 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 SMARCC1Q92922 1105 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-204ENST00000424143 NSUN4Q96CB9 384 aaKnown RBP16.99■□□□□ 0.31
C9orf3-204ENST00000424143 SELENOOQ9BVL4 669 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 ABCF2Q9UG63 623 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
C9orf3-204ENST00000424143 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 ROBO3Q96MS0 1386 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 ATXN2Q99700 1313 aaKnown RBP16.98■□□□□ 0.31
C9orf3-204ENST00000424143 A0A087WUV0 522 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-204ENST00000424143 AGPSO00116 658 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 TRIM21P19474 475 aaKnown RBP16.98■□□□□ 0.31
C9orf3-204ENST00000424143 FKBP15Q5T1M5 1219 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 EMC10Q5UCC4 262 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 CREG2Q8IUH2 290 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 ANKRD18AQ8IVF6 992 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 C1orf131Q8NDD1 294 aaKnown RBP16.98■□□□□ 0.31
C9orf3-204ENST00000424143 ZNF384Q8TF68 577 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 CAVIN3Q969G5 261 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 FAM84BQ96KN1 310 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-204ENST00000424143 LACRTQ9GZZ8 138 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 HDAC6Q9UBN7 1215 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 RSPH14Q9UHP6 348 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 MYH1P12882 1939 aa16.98■□□□□ 0.31
C9orf3-204ENST00000424143 TRIM49BA6NDI0 452 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 TRIM66O15016 1216 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 TNNT3P45378 269 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-204ENST00000424143 SKOR1P84550 965 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 APBA1Q02410 837 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 MIIPQ5JXC2 388 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 CENPPQ6IPU0 288 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 CCDC84Q86UT8 332 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-204ENST00000424143 RNF10Q8N5U6 811 aaKnown RBP16.97■□□□□ 0.31
C9orf3-204ENST00000424143 TRERF1Q96PN7 1200 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 TRIM9Q9C026 710 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 PCDHA6Q9UN73 950 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 PCDHA8Q9Y5H6 950 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 FLT1P17948 1338 aa16.97■□□□□ 0.31
C9orf3-204ENST00000424143 PVALEFA0A1B0GWK0 134 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 B4DLN1 442 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 PDE2AO00408 941 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-204ENST00000424143 IDEP14735 1019 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 SLC10A5Q5PT55 438 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 KRT25Q7Z3Z0 450 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 CAGE1Q8TC20 777 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 CNOT6LQ96LI5 555 aaKnown RBP16.96■□□□□ 0.31
C9orf3-204ENST00000424143 CDCA7Q9BWT1 371 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-204ENST00000424143 SH2D4AQ9H788 454 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 KAT14Q9H8E8 782 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 BARHL2Q9NY43 387 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 ZNF652Q9Y2D9 606 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 ZNF831Q5JPB2 1677 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.31
C9orf3-204ENST00000424143 CCDC88AQ3V6T2 1871 aa16.96■□□□□ 0.3
C9orf3-204ENST00000424143 CYP2D7A0A087X1C5 515 aa16.96■□□□□ 0.3
C9orf3-204ENST00000424143 GOLGA6BA6NDN3 693 aa16.96■□□□□ 0.3
C9orf3-204ENST00000424143 RCCD1A6NED2 376 aa16.96■□□□□ 0.3
C9orf3-204ENST00000424143 EXOC5O00471 708 aa16.96■□□□□ 0.3
C9orf3-204ENST00000424143 ENC1O14682 589 aa16.96■□□□□ 0.3
C9orf3-204ENST00000424143 GGCXP38435 758 aa16.96■□□□□ 0.3
C9orf3-204ENST00000424143 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.3
C9orf3-204ENST00000424143 CCDC42Q96M95 316 aa16.96■□□□□ 0.3
C9orf3-204ENST00000424143 NUCKS1Q9H1E3 243 aaKnown RBP16.96■□□□□ 0.3
C9orf3-204ENST00000424143 AGPAT5Q9NUQ2 364 aa16.96■□□□□ 0.3
C9orf3-204ENST00000424143 HYOU1Q9Y4L1 999 aa16.96■□□□□ 0.3
C9orf3-204ENST00000424143 SSU72P8A0A1W2PR75 194 aa16.95■□□□□ 0.3
C9orf3-204ENST00000424143 SRRM3A6NNA2 597 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-204ENST00000424143 COBLO75128 1261 aa16.95■□□□□ 0.3
C9orf3-204ENST00000424143 GYG1P46976 350 aa16.95■□□□□ 0.3
C9orf3-204ENST00000424143 EPHB4P54760 987 aa16.95■□□□□ 0.3
C9orf3-204ENST00000424143 TTC31Q49AM3 519 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-204ENST00000424143 CABP7Q86V35 215 aa16.95■□□□□ 0.3
C9orf3-204ENST00000424143 SPATS2Q86XZ4 545 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms