RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 TPD52L1Q16890 204 aaPredicted RBP14.67□□□□□ -0.06
LINC00642-201ENST00000419459 CEP135Q66GS9 1140 aa14.67□□□□□ -0.06
LINC00642-201ENST00000419459 TRIM22Q8IYM9 498 aa14.67□□□□□ -0.06
LINC00642-201ENST00000419459 SHISA4Q96DD7 197 aa14.67□□□□□ -0.06
LINC00642-201ENST00000419459 JMJD4Q9H9V9 463 aa14.67□□□□□ -0.06
LINC00642-201ENST00000419459 COL11A1P12107 1806 aaPredicted RBP14.67□□□□□ -0.06
LINC00642-201ENST00000419459 GOLGA6L4A6NEF3 574 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 GRM1Q13255 1194 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 LARP1BQ659C4 914 aaKnown RBP14.66□□□□□ -0.06
LINC00642-201ENST00000419459 GADL1Q6ZQY3 521 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 RBM46Q8TBY0 533 aaKnown RBP14.66□□□□□ -0.06
LINC00642-201ENST00000419459 LPAR1Q92633 364 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 MRFAP1L1Q96HT8 127 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 WNK4Q96J92 1243 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 RNF26Q9BY78 433 aaPredicted RBP14.66□□□□□ -0.06
LINC00642-201ENST00000419459 ABT1Q9ULW3 272 aaKnown RBP14.66□□□□□ -0.06
LINC00642-201ENST00000419459 SYNPO2Q9UMS6 1093 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 RLFQ13129 1914 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 LOC285556D6RIA3 1793 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 FLOT1O75955 427 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 GNAQP50148 359 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 USP14P54578 494 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 PPIL2Q13356 520 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 ERO1AQ96HE7 468 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 ALG1Q9BT22 464 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 SPZ1Q9BXG8 430 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 VPS54Q9P1Q0 977 aa14.66□□□□□ -0.06
LINC00642-201ENST00000419459 WDR46O15213 610 aaKnown RBP14.65□□□□□ -0.06
LINC00642-201ENST00000419459 LIG1P18858 919 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 ZNF165P49910 485 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 ZNF157P51786 506 aaPredicted RBP14.65□□□□□ -0.06
LINC00642-201ENST00000419459 AKAP17AQ02040 695 aaKnown RBP14.65□□□□□ -0.06
LINC00642-201ENST00000419459 LRMPQ12912 555 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 RIOX1Q9H6W3 641 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 DACT1Q9NYF0 836 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 TMOD4Q9NZQ9 345 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 PRR12Q9ULL5 1215 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 A0A0G2JLL6 359 aaPredicted RBP14.65□□□□□ -0.06
LINC00642-201ENST00000419459 C19orf81C9J6K1 198 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 PEX10O60683 326 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 PPP1R11O60927 126 aaPredicted RBP14.65□□□□□ -0.06
LINC00642-201ENST00000419459 DEXIO95424 95 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 TYW1BQ6NUM6 668 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 NYAP1Q6ZVC0 841 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 HEATR3Q7Z4Q2 680 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 PRRT2Q7Z6L0 340 aaPredicted RBP14.65□□□□□ -0.06
LINC00642-201ENST00000419459 KCNJ14Q9UNX9 436 aa14.65□□□□□ -0.06
LINC00642-201ENST00000419459 PRPF3O43395 683 aaKnown RBP14.64□□□□□ -0.07
LINC00642-201ENST00000419459 SYDE2Q5VT97 1194 aa14.64□□□□□ -0.07
LINC00642-201ENST00000419459 FERMT3Q86UX7 667 aa14.64□□□□□ -0.07
LINC00642-201ENST00000419459 CACTINQ8WUQ7 758 aaKnown RBP14.64□□□□□ -0.07
LINC00642-201ENST00000419459 SPATA32Q96LK8 384 aa14.64□□□□□ -0.07
LINC00642-201ENST00000419459 KCNH4Q9UQ05 1017 aa14.64□□□□□ -0.07
LINC00642-201ENST00000419459 STK36Q9NRP7 1315 aa14.64□□□□□ -0.07
LINC00642-201ENST00000419459 HTTP42858 3142 aa14.64□□□□□ -0.07
LINC00642-201ENST00000419459 TMEM88BA6NKF7 163 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 CTAGE5O15320 804 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 TUBB4AP04350 444 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 SCG2P13521 617 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 HTRA3P83110 453 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 MOGSQ13724 837 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 DHX8Q14562 1220 aaKnown RBP14.63□□□□□ -0.07
LINC00642-201ENST00000419459 CDC37Q16543 378 aaPredicted RBP14.63□□□□□ -0.07
LINC00642-201ENST00000419459 USH1GQ495M9 461 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 SH3D19Q5HYK7 790 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 WWC2Q6AWC2 1192 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 LRRC8AQ8IWT6 810 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 COA7Q96BR5 231 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 RRP36Q96EU6 259 aaKnown RBP14.63□□□□□ -0.07
LINC00642-201ENST00000419459 C8orf76Q96K31 380 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 C12orf42Q96LP6 360 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 SEC63Q9UGP8 760 aaKnown RBP14.63□□□□□ -0.07
LINC00642-201ENST00000419459 ADAMTS3O15072 1205 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 PTPN14Q15678 1187 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 PFKFB3Q16875 520 aaPredicted RBP14.63□□□□□ -0.07
LINC00642-201ENST00000419459 QRICH1Q2TAL8 776 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 SPRYD7Q5W111 196 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 CCDC174Q6PII3 467 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 PAXIP1Q6ZW49 1069 aaPredicted RBP14.63□□□□□ -0.07
LINC00642-201ENST00000419459 RASAL3Q86YV0 1011 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 MS4A4AQ96JQ5 239 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 LZTS2Q9BRK4 669 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 TLL2Q9Y6L7 1015 aa14.63□□□□□ -0.07
LINC00642-201ENST00000419459 GOLGA6L19H0YKK7 550 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 H3BQV1 296 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 CXCL11O14625 94 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 SLC20A2Q08357 652 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 SNAPC2Q13487 334 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 CAMK4Q16566 473 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 TPRNQ4KMQ1 711 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 IFFO2Q5TF58 517 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 BTNL9Q6UXG8 535 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 LEO1Q8WVC0 666 aaPredicted RBP14.62□□□□□ -0.07
LINC00642-201ENST00000419459 ATG4CQ96DT6 458 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 SLF1Q9BQI6 1058 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 CALCOCO1Q9P1Z2 691 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 NRBP1Q9UHY1 535 aa14.62□□□□□ -0.07
LINC00642-201ENST00000419459 ZBTB5O15062 677 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 FSTL1Q12841 308 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 RGMBQ6NW40 437 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms