RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 THAP9Q9H5L6 903 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 SLC39A14Q15043 492 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 FBXO38Q6PIJ6 1188 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 NLRP7Q8WX94 980 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 XAGE2Q96GT9 111 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 RABEP2Q9H5N1 569 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 ARMCX3Q9UH62 379 aaPredicted RBP10.98□□□□□ -0.65
LINC00963-202ENST00000419300 PCDHB13Q9Y5F0 798 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 ZNF521Q96K83 1311 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 SYNGAP1Q96PV0 1343 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 RFC1P35251 1148 aaPredicted RBP10.98□□□□□ -0.65
LINC00963-202ENST00000419300 TXNDC9O14530 226 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 RINT1Q6NUQ1 792 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 ARHGEF25Q86VW2 580 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 FBXO18Q8NFZ0 1043 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 LRWD1Q9UFC0 647 aa10.98□□□□□ -0.65
LINC00963-202ENST00000419300 MORC2Q9Y6X9 1032 aaPredicted RBP10.98□□□□□ -0.65
LINC00963-202ENST00000419300 GRID2IPA4D2P6 1211 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 HNRNPCL1O60812 293 aaKnown RBP10.97□□□□□ -0.65
LINC00963-202ENST00000419300 SERPINB6P35237 376 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 BPIFB4P59827 614 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 ASPHQ12797 758 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 KRT39Q6A163 491 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 OLFM3Q96PB7 478 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 SERPINI1Q99574 410 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 LSG1Q9H089 658 aaKnown RBP10.97□□□□□ -0.65
LINC00963-202ENST00000419300 COPB1P53618 953 aaKnown RBP10.97□□□□□ -0.65
LINC00963-202ENST00000419300 SESN3P58005 492 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 CCDC124Q96CT7 223 aaKnown RBP10.97□□□□□ -0.65
LINC00963-202ENST00000419300 ZNF277Q9NRM2 450 aaPredicted RBP10.97□□□□□ -0.65
LINC00963-202ENST00000419300 IRS4O14654 1257 aaPredicted RBP10.97□□□□□ -0.65
LINC00963-202ENST00000419300 CWF19L2Q2TBE0 894 aaKnown RBP10.97□□□□□ -0.65
LINC00963-202ENST00000419300 SRRM1Q8IYB3 904 aaKnown RBP10.97□□□□□ -0.65
LINC00963-202ENST00000419300 SPATA5Q8NB90 893 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 KIF1AQ12756 1690 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 CASP8Q14790 479 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 SNX29Q8TEQ0 813 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 LPIN2Q92539 896 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 IL2RBP14784 551 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 CAV1Q03135 178 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 LRMPQ12912 555 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 AKNAD1Q5T1N1 836 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 PDZD4Q76G19 769 aaPredicted RBP10.97□□□□□ -0.65
LINC00963-202ENST00000419300 STK17AQ9UEE5 414 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 RFC4P35249 363 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 GARSP41250 739 aaKnown RBP10.97□□□□□ -0.65
LINC00963-202ENST00000419300 MGARPQ8TDB4 240 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 FANCLQ9NW38 375 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 DAAM1Q9Y4D1 1078 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 ANKARQ7Z5J8 1434 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 ERBB4Q15303 1308 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 PALM2Q8IXS6 379 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 ANKRD35Q8N283 1001 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 ARHGAP18Q8N392 663 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 TSC22D3Q99576 134 aa10.97□□□□□ -0.65
LINC00963-202ENST00000419300 IPO11Q9UI26 975 aaKnown RBP10.97□□□□□ -0.65
LINC00963-202ENST00000419300 PLA2R1Q13018 1463 aa10.96□□□□□ -0.65
LINC00963-202ENST00000419300 HOOK2Q96ED9 719 aa10.96□□□□□ -0.65
LINC00963-202ENST00000419300 TRIM15Q9C019 465 aa10.96□□□□□ -0.65
LINC00963-202ENST00000419300 RPAP1Q9BWH6 1393 aaPredicted RBP10.96□□□□□ -0.65
LINC00963-202ENST00000419300 CHUKO15111 745 aa10.96□□□□□ -0.65
LINC00963-202ENST00000419300 FOXP2O15409 715 aa10.96□□□□□ -0.65
LINC00963-202ENST00000419300 SLC12A2P55011 1212 aa10.96□□□□□ -0.65
LINC00963-202ENST00000419300 USP19O94966 1318 aa10.96□□□□□ -0.65
LINC00963-202ENST00000419300 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC00963-202ENST00000419300 SH3GL3Q99963 347 aa10.96□□□□□ -0.65
LINC00963-202ENST00000419300 IPO5O00410 1097 aaKnown RBP10.96□□□□□ -0.65
LINC00963-202ENST00000419300 HERC4Q5GLZ8 1057 aaPredicted RBP10.96□□□□□ -0.65
LINC00963-202ENST00000419300 CDKL2Q92772 493 aa10.96□□□□□ -0.65
LINC00963-202ENST00000419300 PHKBQ93100 1093 aa10.96□□□□□ -0.65
LINC00963-202ENST00000419300 PFDN6O15212 129 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 EIF3DO15371 548 aaKnown RBP eCLIP10.96□□□□□ -0.66
LINC00963-202ENST00000419300 CTNND1O60716 968 aaKnown RBP10.96□□□□□ -0.66
LINC00963-202ENST00000419300 CIAO1O76071 339 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 GOLGA8CPA6NN73 597 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 CCDC93Q567U6 631 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 VIPAS39Q9H9C1 493 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 CACYBPQ9HB71 228 aaKnown RBP10.96□□□□□ -0.66
LINC00963-202ENST00000419300 CREB3O43889 395 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 DMP1Q13316 513 aaPredicted RBP10.96□□□□□ -0.66
LINC00963-202ENST00000419300 RASIP1Q5U651 963 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 ZNF790Q6PG37 636 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 MRPL40Q9NQ50 206 aaKnown RBP10.96□□□□□ -0.66
LINC00963-202ENST00000419300 CDC37Q16543 378 aaPredicted RBP10.96□□□□□ -0.66
LINC00963-202ENST00000419300 PODNQ7Z5L7 613 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 ZNF354CQ86Y25 554 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 FAM96AQ9H5X1 160 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 C1orf112Q9NSG2 853 aa10.96□□□□□ -0.66
LINC00963-202ENST00000419300 MYO18AQ92614 2054 aaKnown RBP10.95□□□□□ -0.66
LINC00963-202ENST00000419300 MYO1CO00159 1063 aa10.95□□□□□ -0.66
LINC00963-202ENST00000419300 MAPK13O15264 365 aa10.95□□□□□ -0.66
LINC00963-202ENST00000419300 CABP7Q86V35 215 aa10.95□□□□□ -0.66
LINC00963-202ENST00000419300 PLA2G4DQ86XP0 818 aa10.95□□□□□ -0.66
LINC00963-202ENST00000419300 RNASE9P60153 205 aaKnown RBP10.95□□□□□ -0.66
LINC00963-202ENST00000419300 MKRN3Q13064 507 aaKnown RBP10.95□□□□□ -0.66
LINC00963-202ENST00000419300 CARD10Q9BWT7 1032 aa10.95□□□□□ -0.66
LINC00963-202ENST00000419300 TMEM60Q9H2L4 133 aa10.95□□□□□ -0.66
LINC00963-202ENST00000419300 PYCARDQ9ULZ3 195 aa10.95□□□□□ -0.66
LINC00963-202ENST00000419300 OR52Z1P0C646 297 aa10.95□□□□□ -0.66
LINC00963-202ENST00000419300 PEX19P40855 299 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms