RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 TEX11Q8IYF3 940 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
DDR1-232ENST00000418800 GGT7Q9UJ14 662 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 SLC5A1P13866 664 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 TMOD1P28289 359 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 SPTY2D1Q68D10 685 aaPredicted RBP12.97□□□□□ -0.33
DDR1-232ENST00000418800 TRIM68Q6AZZ1 485 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 SPATA5Q8NB90 893 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 ZIM3Q96PE6 472 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 KRT12Q99456 494 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 YIPF3Q9GZM5 350 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 FAM217BQ9NTX9 383 aaPredicted RBP12.97□□□□□ -0.33
DDR1-232ENST00000418800 RMND1Q9NWS8 449 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 STK38LQ9Y2H1 464 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 SOS2Q07890 1332 aaPredicted RBP12.97□□□□□ -0.33
DDR1-232ENST00000418800 FOXP2O15409 715 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 NTRK3Q16288 839 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 MEX3CQ5U5Q3 659 aaKnown RBP12.97□□□□□ -0.33
DDR1-232ENST00000418800 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
DDR1-232ENST00000418800 ZNF473Q8WTR7 871 aaKnown RBP12.97□□□□□ -0.33
DDR1-232ENST00000418800 FAM167BQ9BTA0 163 aa12.97□□□□□ -0.33
DDR1-232ENST00000418800 HEXIM1O94992 359 aaKnown RBP12.96□□□□□ -0.33
DDR1-232ENST00000418800 MMP14P50281 582 aa12.96□□□□□ -0.33
DDR1-232ENST00000418800 EHHADHQ08426 723 aa12.96□□□□□ -0.33
DDR1-232ENST00000418800 WDR93Q6P2C0 686 aa12.96□□□□□ -0.33
DDR1-232ENST00000418800 MB21D1Q8N884 522 aa12.96□□□□□ -0.33
DDR1-232ENST00000418800 MIEF2Q96C03 454 aa12.96□□□□□ -0.33
DDR1-232ENST00000418800 VIPAS39Q9H9C1 493 aa12.96□□□□□ -0.33
DDR1-232ENST00000418800 SEPT11Q9NVA2 429 aaKnown RBP12.96□□□□□ -0.33
DDR1-232ENST00000418800 TBC1D1Q86TI0 1168 aaPredicted RBP12.96□□□□□ -0.33
DDR1-232ENST00000418800 NLRP14Q86W24 1093 aa12.96□□□□□ -0.33
DDR1-232ENST00000418800 RGPD8O14715 1765 aaPredicted RBP12.96□□□□□ -0.33
DDR1-232ENST00000418800 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.33
DDR1-232ENST00000418800 AGPSO00116 658 aa12.96□□□□□ -0.34
DDR1-232ENST00000418800 OPLAHO14841 1288 aa12.96□□□□□ -0.34
DDR1-232ENST00000418800 UPP2O95045 317 aa12.96□□□□□ -0.34
DDR1-232ENST00000418800 INF2Q27J81 1249 aa12.96□□□□□ -0.34
DDR1-232ENST00000418800 FAM133BQ5BKY9 247 aaKnown RBP12.96□□□□□ -0.34
DDR1-232ENST00000418800 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.34
DDR1-232ENST00000418800 AMOTL1Q8IY63 956 aa12.96□□□□□ -0.34
DDR1-232ENST00000418800 CALR3Q96L12 384 aaKnown RBP12.96□□□□□ -0.34
DDR1-232ENST00000418800 CPVLQ9H3G5 476 aa12.96□□□□□ -0.34
DDR1-232ENST00000418800 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.34
DDR1-232ENST00000418800 PXDNQ92626 1479 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 TCP11L1Q9NUJ3 509 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 TMOD3Q9NYL9 352 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 ANKARQ7Z5J8 1434 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 RCCD1A6NED2 376 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
DDR1-232ENST00000418800 CARSP49589 748 aaKnown RBP12.95□□□□□ -0.34
DDR1-232ENST00000418800 LRRC41Q15345 812 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 AP1ARQ63HQ0 302 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 TMTC2Q8N394 836 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 KIF9Q9HAQ2 790 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 PEAK1Q9H792 1746 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 PPP1R37O75864 691 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 PMS1P54277 932 aaKnown RBP12.95□□□□□ -0.34
DDR1-232ENST00000418800 DYNLL1P63167 89 aaKnown RBP12.95□□□□□ -0.34
DDR1-232ENST00000418800 CACNA2D3Q8IZS8 1091 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 SPATA4Q8NEY3 305 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 DYDC1Q8WWB3 177 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 ZBTB10Q96DT7 871 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 EPB41L4AQ9HCS5 686 aaPredicted RBP12.95□□□□□ -0.34
DDR1-232ENST00000418800 MYO1AQ9UBC5 1043 aa12.95□□□□□ -0.34
DDR1-232ENST00000418800 TECPR2O15040 1411 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 CPP00450 1065 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 VIMP08670 466 aaKnown RBP12.94□□□□□ -0.34
DDR1-232ENST00000418800 IFNAR2P48551 515 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 EPHB4P54760 987 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 GSCP56915 257 aaPredicted RBP12.94□□□□□ -0.34
DDR1-232ENST00000418800 RAPGEF1Q13905 1077 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 TRIM14Q14142 442 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 MAEAQ7L5Y9 396 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 TRAPPC11Q7Z392 1133 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 DNAAF5Q86Y56 855 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 TTLL11Q8NHH1 800 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 FERMT2Q96AC1 680 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 CNOT6LQ96LI5 555 aaKnown RBP12.94□□□□□ -0.34
DDR1-232ENST00000418800 STIM2Q9P246 746 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 EP400Q96L91 3159 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 USP17L12C9JPN9 530 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 USP17L21D6R901 530 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 GCOM1H8Y6P7 765 aaPredicted RBP12.94□□□□□ -0.34
DDR1-232ENST00000418800 CLSTN1O94985 981 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 MYZAPP0CAP1 466 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 GOLGA8HP0CJ92 632 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 LLGL1Q15334 1064 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 HLFQ16534 295 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 DZIP3Q86Y13 1208 aaKnown RBP12.94□□□□□ -0.34
DDR1-232ENST00000418800 IFT20Q8IY31 132 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 CCDC170Q8IYT3 715 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 ZCRB1Q8TBF4 217 aaKnown RBP12.94□□□□□ -0.34
DDR1-232ENST00000418800 GOLPH3Q9H4A6 298 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 GPR108Q9NPR9 543 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 MAGEB6P1A0A0J9YX57 407 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 H7C1D1 291 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
DDR1-232ENST00000418800 CEP104O60308 925 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms