RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 NSMFQ6X4W1 530 aa18.42■□□□□ 0.54
RHBDF1-202ENST00000417043 NOL8Q76FK4 1167 aaKnown RBP18.42■□□□□ 0.54
RHBDF1-202ENST00000417043 EEPD1Q7L9B9 569 aa18.42■□□□□ 0.54
RHBDF1-202ENST00000417043 GPCPD1Q9NPB8 672 aa18.42■□□□□ 0.54
RHBDF1-202ENST00000417043 PDGFCQ9NRA1 345 aa18.42■□□□□ 0.54
RHBDF1-202ENST00000417043 CCPG1Q9ULG6 757 aa18.42■□□□□ 0.54
RHBDF1-202ENST00000417043 LCTP09848 1927 aa18.42■□□□□ 0.54
RHBDF1-202ENST00000417043 FRMPD2Q68DX3 1309 aaPredicted RBP18.42■□□□□ 0.54
RHBDF1-202ENST00000417043 CST5P28325 142 aaPredicted RBP18.41■□□□□ 0.54
RHBDF1-202ENST00000417043 CDK7P50613 346 aa18.41■□□□□ 0.54
RHBDF1-202ENST00000417043 TNFAIP2Q03169 654 aa18.41■□□□□ 0.54
RHBDF1-202ENST00000417043 ZNF697Q5TEC3 545 aa18.41■□□□□ 0.54
RHBDF1-202ENST00000417043 PCSK9Q8NBP7 692 aaKnown RBP18.41■□□□□ 0.54
RHBDF1-202ENST00000417043 DCAF4Q8WV16 495 aa18.41■□□□□ 0.54
RHBDF1-202ENST00000417043 GLT1D1Q96MS3 346 aa18.41■□□□□ 0.54
RHBDF1-202ENST00000417043 TOX2Q96NM4 488 aa18.41■□□□□ 0.54
RHBDF1-202ENST00000417043 SPC25Q9HBM1 224 aa18.41■□□□□ 0.54
RHBDF1-202ENST00000417043 CYP39A1Q9NYL5 469 aa18.41■□□□□ 0.54
RHBDF1-202ENST00000417043 CDH23Q9H251 3354 aa18.41■□□□□ 0.54
RHBDF1-202ENST00000417043 PRUNE2Q8WUY3 3088 aa18.4■□□□□ 0.54
RHBDF1-202ENST00000417043 TOP1P11387 765 aaKnown RBP18.4■□□□□ 0.54
RHBDF1-202ENST00000417043 FPGSQ05932 587 aa18.4■□□□□ 0.54
RHBDF1-202ENST00000417043 SMC5Q8IY18 1101 aa18.4■□□□□ 0.54
RHBDF1-202ENST00000417043 SEMA6BQ9H3T3 888 aa18.4■□□□□ 0.54
RHBDF1-202ENST00000417043 ELP1O95163 1332 aa18.4■□□□□ 0.54
RHBDF1-202ENST00000417043 CCDC171Q6TFL3 1326 aa18.4■□□□□ 0.54
RHBDF1-202ENST00000417043 ASB14A6NK59 587 aa18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 ARVCFO00192 962 aa18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 ICAM1P05362 532 aa18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 SMPD1P17405 629 aa18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 SDSP20132 328 aa18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 SYDE2Q5VT97 1194 aa18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 BTNL9Q6UXG8 535 aa18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 TBC1D10CQ8IV04 446 aa18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 PLEKHM2Q8IWE5 1019 aa18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 FBXO16Q8IX29 292 aaPredicted RBP18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 EXOC6Q8TAG9 804 aa18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 RNPC3Q96LT9 517 aaKnown RBP18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 RANBP17Q9H2T7 1088 aaKnown RBP18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 RWDD1Q9H446 243 aaPredicted RBP18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 TCP11L1Q9NUJ3 509 aa18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 GNEQ9Y223 722 aaKnown RBP18.39■□□□□ 0.53
RHBDF1-202ENST00000417043 NFIBO00712 420 aa18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 DYNC1LI2O43237 492 aaPredicted RBP18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 TIMP1P01033 207 aa18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 BAATQ14032 418 aaPredicted RBP18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 AKNAD1Q5T1N1 836 aa18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 TAPT1Q6NXT6 567 aa18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 CXCL17Q6UXB2 119 aa18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 MFSD6Q6ZSS7 791 aa18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 CHD1LQ86WJ1 897 aa18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 CDX2Q99626 313 aaPredicted RBP18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 ZKSCAN3Q9BRR0 538 aa18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 TTYH1Q9H313 450 aaPredicted RBP18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 TBX21Q9UL17 535 aa18.38■□□□□ 0.53
RHBDF1-202ENST00000417043 LRRC37A2A6NM11 1700 aa18.37■□□□□ 0.53
RHBDF1-202ENST00000417043 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
RHBDF1-202ENST00000417043 PDHBP11177 359 aa18.37■□□□□ 0.53
RHBDF1-202ENST00000417043 SMAD3P84022 425 aaKnown RBP18.37■□□□□ 0.53
RHBDF1-202ENST00000417043 TLK2Q86UE8 772 aa18.37■□□□□ 0.53
RHBDF1-202ENST00000417043 PPP1R12CQ9BZL4 782 aa18.37■□□□□ 0.53
RHBDF1-202ENST00000417043 NEDD4P46934 1319 aa18.37■□□□□ 0.53
RHBDF1-202ENST00000417043 PTPDC1A2A3K4 754 aa18.36■□□□□ 0.53
RHBDF1-202ENST00000417043 ZMYM6O95789 1325 aa18.36■□□□□ 0.53
RHBDF1-202ENST00000417043 NKX3-2P78367 333 aa18.36■□□□□ 0.53
RHBDF1-202ENST00000417043 NUCB1Q02818 461 aa18.36■□□□□ 0.53
RHBDF1-202ENST00000417043 FSCN1Q16658 493 aaKnown RBP18.36■□□□□ 0.53
RHBDF1-202ENST00000417043 CWC27Q6UX04 472 aaKnown RBP18.36■□□□□ 0.53
RHBDF1-202ENST00000417043 C16orf59Q7L2K0 433 aa18.36■□□□□ 0.53
RHBDF1-202ENST00000417043 FAM126BQ8IXS8 530 aa18.36■□□□□ 0.53
RHBDF1-202ENST00000417043 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.539e-7■■□□□ 12.6
RHBDF1-202ENST00000417043 CPVLQ9H3G5 476 aa18.36■□□□□ 0.53
RHBDF1-202ENST00000417043 GRIN2DO15399 1336 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 MROH7Q68CQ1 1323 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 GOLGA8HP0CJ92 632 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 ACRP10323 421 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 ZNF543Q08ER8 600 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 IQSEC1Q6DN90 963 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 MFSD5Q6N075 450 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 KIAA1211Q6ZU35 1233 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 TICAM2Q86XR7 235 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 CLEC4DQ8WXI8 215 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 MYLIPQ8WY64 445 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 TTC14Q96N46 770 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 AP5M1Q9H0R1 490 aa18.35■□□□□ 0.53
RHBDF1-202ENST00000417043 CUL9Q8IWT3 2517 aa18.34■□□□□ 0.53
RHBDF1-202ENST00000417043 CSF2RAP15509 400 aa18.34■□□□□ 0.53
RHBDF1-202ENST00000417043 CALML3P27482 149 aa18.34■□□□□ 0.53
RHBDF1-202ENST00000417043 ALDH5A1P51649 535 aaPredicted RBP18.34■□□□□ 0.53
RHBDF1-202ENST00000417043 PSMC6P62333 389 aa18.34■□□□□ 0.53
RHBDF1-202ENST00000417043 SLC30A10Q6XR72 485 aa18.34■□□□□ 0.53
RHBDF1-202ENST00000417043 MORC4Q8TE76 937 aa18.34■□□□□ 0.53
RHBDF1-202ENST00000417043 UBA5Q9GZZ9 404 aa18.34■□□□□ 0.53
RHBDF1-202ENST00000417043 OSBPL3Q9H4L5 887 aa18.34■□□□□ 0.53
RHBDF1-202ENST00000417043 MYO9BQ13459 2157 aa18.33■□□□□ 0.52
RHBDF1-202ENST00000417043 ZNF213O14771 459 aa18.33■□□□□ 0.52
RHBDF1-202ENST00000417043 CD4P01730 458 aa18.33■□□□□ 0.52
RHBDF1-202ENST00000417043 CYP2C18P33260 490 aa18.33■□□□□ 0.52
RHBDF1-202ENST00000417043 ITGA7Q13683 1181 aa18.33■□□□□ 0.52
RHBDF1-202ENST00000417043 SLC43A3Q8NBI5 491 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms