RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 PLA2G1BP04054 148 aaKnown RBP5.61□□□□□ -1.51
TRAPPC13-203ENST00000415825 MVKQ03426 396 aa5.61□□□□□ -1.51
TRAPPC13-203ENST00000415825 FAM160A1Q05DH4 1040 aa5.61□□□□□ -1.51
TRAPPC13-203ENST00000415825 LGI4Q8N135 537 aa5.61□□□□□ -1.51
TRAPPC13-203ENST00000415825 ZNF512BQ96KM6 892 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC13-203ENST00000415825 C1QTNF3Q9BXJ4 246 aa5.61□□□□□ -1.51
TRAPPC13-203ENST00000415825 PRR13Q9NZ81 148 aa5.61□□□□□ -1.51
TRAPPC13-203ENST00000415825 DUSP10Q9Y6W6 482 aa5.61□□□□□ -1.51
TRAPPC13-203ENST00000415825 USP31Q70CQ4 1352 aa5.6□□□□□ -1.51
TRAPPC13-203ENST00000415825 ATF2P15336 505 aa5.6□□□□□ -1.51
TRAPPC13-203ENST00000415825 CORO7P57737 925 aa5.6□□□□□ -1.51
TRAPPC13-203ENST00000415825 HTRA3P83110 453 aa5.6□□□□□ -1.51
TRAPPC13-203ENST00000415825 CRTC3Q6UUV7 619 aa5.6□□□□□ -1.51
TRAPPC13-203ENST00000415825 B3GNT8Q7Z7M8 397 aa5.6□□□□□ -1.51
TRAPPC13-203ENST00000415825 SH3RF3Q8TEJ3 882 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-203ENST00000415825 MINPP1Q9UNW1 487 aa5.6□□□□□ -1.51
TRAPPC13-203ENST00000415825 ROBO2Q9HCK4 1378 aa5.59□□□□□ -1.51
TRAPPC13-203ENST00000415825 DNAJA2O60884 412 aa5.59□□□□□ -1.51
TRAPPC13-203ENST00000415825 NOL9Q5SY16 702 aaKnown RBP5.59□□□□□ -1.51
TRAPPC13-203ENST00000415825 RSRP1Q9BUV0 290 aa5.59□□□□□ -1.51
TRAPPC13-203ENST00000415825 PARP2Q9UGN5 583 aa5.59□□□□□ -1.51
TRAPPC13-203ENST00000415825 PCDHB14Q9Y5E9 798 aa5.59□□□□□ -1.51
TRAPPC13-203ENST00000415825 MINDY4BA8MYZ0 360 aa5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 TLR3O15455 904 aaKnown RBP5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 ASGR2P07307 311 aa5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 TACR1P25103 407 aa5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 AUHQ13825 339 aaKnown RBP5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 LRRFIP1Q32MZ4 808 aaKnown RBP5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 OVOS1Q6IE37 1185 aa5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 NLRC3Q7RTR2 1065 aa5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 ZFPM1Q8IX07 1006 aa5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 ZBTB8AQ96BR9 441 aa5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 DHRS1Q96LJ7 313 aa5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 PCDH18Q9HCL0 1135 aa5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 MRS2Q9HD23 443 aa5.58□□□□□ -1.52
TRAPPC13-203ENST00000415825 POLR2BP30876 1174 aaKnown RBP5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 DAB2P98082 770 aa5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 TRIM26Q12899 539 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 SLC9A5Q14940 896 aa5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 SURF1Q15526 300 aa5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 CDCP2Q5VXM1 449 aa5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 FAM196AQ6ZSG2 479 aa5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 ZNF761Q86XN6 746 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 PEX11GQ96HA9 241 aa5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 RHOVQ96L33 236 aa5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 RBM15Q96T37 977 aaKnown RBP eCLIP5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 SCAND2PQ9GZW5 306 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC13-203ENST00000415825 L1CAMP32004 1257 aa5.56□□□□□ -1.52
TRAPPC13-203ENST00000415825 MC3RP41968 323 aa5.56□□□□□ -1.52
TRAPPC13-203ENST00000415825 CCDC144CPQ8IYA2 1237 aa5.56□□□□□ -1.52
TRAPPC13-203ENST00000415825 SMARCC2Q8TAQ2 1214 aa5.56□□□□□ -1.52
TRAPPC13-203ENST00000415825 ADAMTS17Q8TE56 1095 aa5.56□□□□□ -1.52
TRAPPC13-203ENST00000415825 SLC6A18Q96N87 628 aa5.56□□□□□ -1.52
TRAPPC13-203ENST00000415825 CNNM2Q9H8M5 875 aa5.56□□□□□ -1.52
TRAPPC13-203ENST00000415825 HCFC2Q9Y5Z7 792 aa5.56□□□□□ -1.52
TRAPPC13-203ENST00000415825 ANKRD33BA6NCL7 494 aa5.55□□□□□ -1.52
TRAPPC13-203ENST00000415825 FBLN1P23142 703 aa5.55□□□□□ -1.52
TRAPPC13-203ENST00000415825 CTSKP43235 329 aa5.55□□□□□ -1.52
TRAPPC13-203ENST00000415825 KRTAP1-1Q07627 177 aa5.55□□□□□ -1.52
TRAPPC13-203ENST00000415825 RGL3Q3MIN7 710 aa5.55□□□□□ -1.52
TRAPPC13-203ENST00000415825 TBC1D10BQ4KMP7 808 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC13-203ENST00000415825 TMC4Q7Z404 712 aa5.55□□□□□ -1.52
TRAPPC13-203ENST00000415825 PLEKHH3Q7Z736 793 aa5.55□□□□□ -1.52
TRAPPC13-203ENST00000415825 VPS11Q9H270 941 aa5.55□□□□□ -1.52
TRAPPC13-203ENST00000415825 BRMS1Q9HCU9 246 aa5.55□□□□□ -1.52
TRAPPC13-203ENST00000415825 SUPT16HQ9Y5B9 1047 aaKnown RBP5.55□□□□□ -1.52
TRAPPC13-203ENST00000415825 SORBS3O60504 671 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 ATE1O95260 518 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 ZBTB7AO95365 584 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 CYP2C8P10632 490 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 PMLP29590 882 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 MCM4P33991 863 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 CRB2Q5IJ48 1285 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 TMEM52Q8NDY8 209 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 FBXO27Q8NI29 283 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 USP33Q8TEY7 942 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 CPA5Q8WXQ8 436 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 ATG4CQ96DT6 458 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 TSPAN17Q96FV3 270 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 ST6GALNAC2Q9UJ37 374 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 SF3B6Q9Y3B4 125 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 TSC22D4Q9Y3Q8 395 aa5.54□□□□□ -1.52
TRAPPC13-203ENST00000415825 MROH6A6NGR9 719 aa5.53□□□□□ -1.52
TRAPPC13-203ENST00000415825 CACNB2Q08289 660 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-203ENST00000415825 RTP2Q5QGT7 225 aa5.53□□□□□ -1.52
TRAPPC13-203ENST00000415825 SPRED1Q7Z699 444 aa5.53□□□□□ -1.52
TRAPPC13-203ENST00000415825 C7orf61Q8IZ16 206 aa5.53□□□□□ -1.52
TRAPPC13-203ENST00000415825 DDX11Q96FC9 970 aa5.53□□□□□ -1.52
TRAPPC13-203ENST00000415825 SLC12A9Q9BXP2 914 aa5.53□□□□□ -1.52
TRAPPC13-203ENST00000415825 DEF6Q9H4E7 631 aa5.53□□□□□ -1.52
TRAPPC13-203ENST00000415825 INVSQ9Y283 1065 aa5.53□□□□□ -1.52
TRAPPC13-203ENST00000415825 FGF10O15520 208 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-203ENST00000415825 ZNF165P49910 485 aa5.52□□□□□ -1.53
TRAPPC13-203ENST00000415825 POU4F1Q01851 419 aa5.52□□□□□ -1.53
TRAPPC13-203ENST00000415825 DLX2Q07687 328 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-203ENST00000415825 SMAD4Q13485 552 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-203ENST00000415825 FAM26FQ5R3K3 315 aa5.52□□□□□ -1.53
TRAPPC13-203ENST00000415825 LZTR1Q8N653 840 aa5.52□□□□□ -1.53
TRAPPC13-203ENST00000415825 PTCHD1Q96NR3 888 aa5.52□□□□□ -1.53
TRAPPC13-203ENST00000415825 VTI1BQ9UEU0 232 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms