RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 SMG5Q9UPR3 1016 aaKnown RBP8.63□□□□□ -1.03
ATG4C-204ENST00000414558 NPIPB6E9PJ23 425 aa8.62□□□□□ -1.03
ATG4C-204ENST00000414558 AURKAO14965 403 aa8.62□□□□□ -1.03
ATG4C-204ENST00000414558 ZNF143P52747 638 aaPredicted RBP8.62□□□□□ -1.03
ATG4C-204ENST00000414558 SRSF3P84103 164 aaKnown RBP8.62□□□□□ -1.03
ATG4C-204ENST00000414558 LRRC56Q8IYG6 542 aaPredicted RBP8.62□□□□□ -1.03
ATG4C-204ENST00000414558 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATG4C-204ENST00000414558 SUSD2Q9UGT4 822 aa8.62□□□□□ -1.03
ATG4C-204ENST00000414558 MRVI1Q9Y6F6 885 aa8.62□□□□□ -1.03
ATG4C-204ENST00000414558 SDHBP21912 280 aa8.61□□□□□ -1.03
ATG4C-204ENST00000414558 CFPP27918 469 aa8.61□□□□□ -1.03
ATG4C-204ENST00000414558 YBX1P67809 324 aaKnown RBP8.61□□□□□ -1.03
ATG4C-204ENST00000414558 AMPD2Q01433 879 aa8.61□□□□□ -1.03
ATG4C-204ENST00000414558 CRACR2BQ8N4Y2 399 aaPredicted RBP8.61□□□□□ -1.03
ATG4C-204ENST00000414558 APBA2Q99767 749 aa8.61□□□□□ -1.03
ATG4C-204ENST00000414558 TINF2Q9BSI4 451 aa8.61□□□□□ -1.03
ATG4C-204ENST00000414558 KRTAP9-9Q9BYP9 154 aa8.61□□□□□ -1.03
ATG4C-204ENST00000414558 KRTAP9-4Q9BYQ2 154 aa8.61□□□□□ -1.03
ATG4C-204ENST00000414558 TNFRSF12AQ9NP84 129 aa8.61□□□□□ -1.03
ATG4C-204ENST00000414558 SIRT5Q9NXA8 310 aa8.61□□□□□ -1.03
ATG4C-204ENST00000414558 ACTR10Q9NZ32 417 aa8.61□□□□□ -1.03
ATG4C-204ENST00000414558 STXBP3O00186 592 aa8.6□□□□□ -1.03
ATG4C-204ENST00000414558 SMAD7O15105 426 aaKnown RBP8.6□□□□□ -1.03
ATG4C-204ENST00000414558 CORO7P57737 925 aa8.6□□□□□ -1.03
ATG4C-204ENST00000414558 ARID5AQ03989 594 aa8.6□□□□□ -1.03
ATG4C-204ENST00000414558 RAB3GAP1Q15042 981 aa8.6□□□□□ -1.03
ATG4C-204ENST00000414558 POMZP3Q6PJE2 187 aa8.6□□□□□ -1.03
ATG4C-204ENST00000414558 BACE2Q9Y5Z0 518 aa8.6□□□□□ -1.03
ATG4C-204ENST00000414558 A0A1W2PQJ5 194 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 VAMP4O75379 141 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 L1CAMP32004 1257 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 VIPR1P32241 457 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 SEPHS1P49903 392 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 LINC00310P59036 64 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 MVKQ03426 396 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 DPY19L1Q2PZI1 675 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 MCMBPQ9BTE3 642 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 GCM1Q9NP62 436 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 PODXL2Q9NZ53 605 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 PRKAG3Q9UGI9 489 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 AKT3Q9Y243 479 aa8.59□□□□□ -1.03
ATG4C-204ENST00000414558 C2orf71A6NGG8 1288 aa8.58□□□□□ -1.04
ATG4C-204ENST00000414558 RBM10P98175 930 aaKnown RBP8.58□□□□□ -1.04
ATG4C-204ENST00000414558 CIAPIN1Q6FI81 312 aa8.58□□□□□ -1.04
ATG4C-204ENST00000414558 C1QL4Q86Z23 238 aa8.58□□□□□ -1.04
ATG4C-204ENST00000414558 ZNF513Q8N8E2 541 aaPredicted RBP8.58□□□□□ -1.04
ATG4C-204ENST00000414558 SGPP1Q9BX95 441 aa8.58□□□□□ -1.04
ATG4C-204ENST00000414558 PDLIM7Q9NR12 457 aa8.58□□□□□ -1.04
ATG4C-204ENST00000414558 KLHL14Q9P2G3 628 aa8.58□□□□□ -1.04
ATG4C-204ENST00000414558 APEX2Q9UBZ4 518 aa8.58□□□□□ -1.04
ATG4C-204ENST00000414558 MBD1Q9UIS9 605 aaPredicted RBP8.58□□□□□ -1.04
ATG4C-204ENST00000414558 TRBV23OR9-2A0A075B6M9 112 aa8.57□□□□□ -1.04
ATG4C-204ENST00000414558 NUDT19A8MXV4 375 aa8.57□□□□□ -1.04
ATG4C-204ENST00000414558 NOP56O00567 594 aaKnown RBP8.57□□□□□ -1.04
ATG4C-204ENST00000414558 FGRP09769 529 aa8.57□□□□□ -1.04
ATG4C-204ENST00000414558 NR1I3Q14994 352 aa8.57□□□□□ -1.04
ATG4C-204ENST00000414558 LARP1BQ659C4 914 aaKnown RBP8.57□□□□□ -1.04
ATG4C-204ENST00000414558 BVESQ8NE79 360 aa8.57□□□□□ -1.04
ATG4C-204ENST00000414558 NLGN2Q8NFZ4 835 aa8.57□□□□□ -1.04
ATG4C-204ENST00000414558 EMC9Q9Y3B6 208 aa8.57□□□□□ -1.04
ATG4C-204ENST00000414558 E9PSI1 815 aa8.56□□□□□ -1.04
ATG4C-204ENST00000414558 NUAK1O60285 661 aa8.56□□□□□ -1.04
ATG4C-204ENST00000414558 MSL3P1P0C860 447 aa8.56□□□□□ -1.04
ATG4C-204ENST00000414558 CBX2Q14781 532 aaPredicted RBP8.56□□□□□ -1.04
ATG4C-204ENST00000414558 C6orf15Q6UXA7 325 aaPredicted RBP8.56□□□□□ -1.04
ATG4C-204ENST00000414558 FAM178BQ8IXR5 827 aa8.56□□□□□ -1.04
ATG4C-204ENST00000414558 RFXAPO00287 272 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 SRGAP3O43295 1099 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 KCNH1O95259 989 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 PAMP19021 973 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 ETFBP38117 255 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 FXNQ16595 210 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 BICRALQ6AI39 1079 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 RPTNQ6XPR3 784 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 SPOCD1Q6ZMY3 1216 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 TMC6Q7Z403 805 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 SIAH1Q8IUQ4 282 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 SLC43A3Q8NBI5 491 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 PPP1R14AQ96A00 147 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 CNTD2Q9H8S5 307 aa8.55□□□□□ -1.04
ATG4C-204ENST00000414558 CNOT6Q9ULM6 557 aaKnown RBP8.55□□□□□ -1.04
ATG4C-204ENST00000414558 N4BP3O15049 544 aa8.54□□□□□ -1.04
ATG4C-204ENST00000414558 CYBBP04839 570 aa8.54□□□□□ -1.04
ATG4C-204ENST00000414558 ZSCAN22P10073 491 aaPredicted RBP8.54□□□□□ -1.04
ATG4C-204ENST00000414558 DNAJA1P31689 397 aaKnown RBP8.54□□□□□ -1.04
ATG4C-204ENST00000414558 MAPKAPK2P49137 400 aa8.54□□□□□ -1.04
ATG4C-204ENST00000414558 MCF2L2Q86YR7 1114 aa8.54□□□□□ -1.04
ATG4C-204ENST00000414558 SIGLEC10Q96LC7 697 aa8.54□□□□□ -1.04
ATG4C-204ENST00000414558 ZNF408Q9H9D4 720 aa8.54□□□□□ -1.04
ATG4C-204ENST00000414558 IRAK3Q9Y616 596 aa8.54□□□□□ -1.04
ATG4C-204ENST00000414558 NPHP3-ACAD11A0A0J9YXS1 232 aa8.53□□□□□ -1.04
ATG4C-204ENST00000414558 DDAH1O94760 285 aa8.53□□□□□ -1.04
ATG4C-204ENST00000414558 DBHP09172 617 aa8.53□□□□□ -1.04
ATG4C-204ENST00000414558 PLEKHN1Q494U1 663 aaPredicted RBP8.53□□□□□ -1.04
ATG4C-204ENST00000414558 ZNF385BQ569K4 471 aa8.53□□□□□ -1.04
ATG4C-204ENST00000414558 ZC3H14Q6PJT7 736 aaKnown RBP8.53□□□□□ -1.04
ATG4C-204ENST00000414558 PAQR3Q6TCH7 311 aa8.53□□□□□ -1.04
ATG4C-204ENST00000414558 TRIM59Q8IWR1 403 aa8.53□□□□□ -1.04
ATG4C-204ENST00000414558 IGSF5Q9NSI5 407 aa8.53□□□□□ -1.04
ATG4C-204ENST00000414558 KCTD3Q9Y597 815 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms