RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 A0A0G2JLL6 359 aaPredicted RBP7.6□□□□□ -1.19
VPS41-204ENST00000413141 OPLAHO14841 1288 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 PPP6R2O75170 966 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 ICAM1P05362 532 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 ME1P48163 572 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 FKBP1BP68106 108 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 FMR1Q06787 632 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS41-204ENST00000413141 TRAF1Q13077 416 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 PPIL2Q13356 520 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 NONOQ15233 471 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS41-204ENST00000413141 UBE2SQ16763 222 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 INF2Q27J81 1249 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 LDLRAD1Q5T700 205 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 CCDC174Q6PII3 467 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 PRRT2Q7Z6L0 340 aaPredicted RBP7.6□□□□□ -1.19
VPS41-204ENST00000413141 JMYQ8N9B5 988 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 PRPF38AQ8NAV1 312 aaKnown RBP7.6□□□□□ -1.19
VPS41-204ENST00000413141 PSTPIP2Q9H939 334 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 ZNF408Q9H9D4 720 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 SLC38A10Q9HBR0 1119 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 TMEM260Q9NX78 707 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 BIN2Q9UBW5 565 aaPredicted RBP7.6□□□□□ -1.19
VPS41-204ENST00000413141 PCDHA7Q9UN72 937 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 CEP131Q9UPN4 1083 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 KCNH4Q9UQ05 1017 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 MORC2Q9Y6X9 1032 aaPredicted RBP7.6□□□□□ -1.19
VPS41-204ENST00000413141 COL11A1P12107 1806 aaPredicted RBP7.59□□□□□ -1.19
VPS41-204ENST00000413141 MYPNQ86TC9 1320 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 A0A1W2PQ27 194 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 A0A1W2PQ64 194 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 A0A1W2PQD8 194 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 GOLGA6L4A6NEF3 574 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 UNCXA6NJT0 531 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 MEIS2O14770 477 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 IRF6O14896 467 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 BMP15O95972 392 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 ATP2B1P20020 1258 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 MARCKSP29966 332 aaPredicted RBP7.59□□□□□ -1.19
VPS41-204ENST00000413141 MRPL12P52815 198 aaKnown RBP7.59□□□□□ -1.19
VPS41-204ENST00000413141 ATP2C1P98194 919 aaPredicted RBP7.59□□□□□ -1.19
VPS41-204ENST00000413141 AP3B2Q13367 1082 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 TPRNQ4KMQ1 711 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 TREML2Q5T2D2 321 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 JAKMIP3Q5VZ66 844 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 CAVIN1Q6NZI2 390 aaKnown RBP7.59□□□□□ -1.19
VPS41-204ENST00000413141 TEX2Q8IWB9 1127 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 PROCA1Q8NCQ7 364 aaPredicted RBP7.59□□□□□ -1.19
VPS41-204ENST00000413141 OPTNQ96CV9 577 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 ATG4CQ96DT6 458 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 WNK4Q96J92 1243 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 GOLPH3LQ9H4A5 285 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 GBA2Q9HCG7 927 aaPredicted RBP7.59□□□□□ -1.19
VPS41-204ENST00000413141 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.59□□□□□ -1.19
VPS41-204ENST00000413141 FBXO2Q9UK22 296 aaPredicted RBP7.59□□□□□ -1.19
VPS41-204ENST00000413141 CCPG1Q9ULG6 757 aa7.59□□□□□ -1.19
VPS41-204ENST00000413141 TRPM7Q96QT4 1865 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 SPDYE16A6NNV3 312 aaPredicted RBP7.58□□□□□ -1.2
VPS41-204ENST00000413141 USP17L15C9J2P7 530 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 USP17L13C9JLJ4 530 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 USP17L11C9JVI0 530 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 USP17L18D6R9N7 530 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 USP17L22D6RA61 530 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 USP17L17D6RBQ6 530 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 USP17L19D6RCP7 530 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 USP17L20D6RJB6 530 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 PIK3CDO00329 1044 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 VWA5AO00534 786 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 CXCL11O14625 94 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 CELF2O95319 508 aaKnown RBP7.58□□□□□ -1.2
VPS41-204ENST00000413141 FDX1P10109 184 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 LIG1P18858 919 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 MCM7P33993 719 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 GJA5P36382 358 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 USP17L24Q0WX57 530 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 ORC2Q13416 577 aaPredicted RBP7.58□□□□□ -1.2
VPS41-204ENST00000413141 ZNF174Q15697 407 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 AXDND1Q5T1B0 1012 aaPredicted RBP7.58□□□□□ -1.2
VPS41-204ENST00000413141 ADALQ6DHV7 355 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 MCTP2Q6DN12 878 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 CHADLQ6NUI6 762 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 USP17L6PQ6QN14 398 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 CATSPERGQ6ZRH7 1159 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 NEK8Q86SG6 692 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 KRI1Q8N9T8 703 aaKnown RBP7.58□□□□□ -1.2
VPS41-204ENST00000413141 REPS2Q8NFH8 660 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 TBCKQ8TEA7 893 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 MRPS27Q92552 414 aaKnown RBP7.58□□□□□ -1.2
VPS41-204ENST00000413141 SYAP1Q96A49 352 aaPredicted RBP7.58□□□□□ -1.2
VPS41-204ENST00000413141 AGBL1Q96MI9 1066 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 P2RX7Q99572 595 aaKnown RBP7.58□□□□□ -1.2
VPS41-204ENST00000413141 ANO3Q9BYT9 981 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 TMEM63CQ9P1W3 806 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 ADAMTS5Q9UNA0 930 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 AGTPBP1Q9UPW5 1226 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 MRPL11Q9Y3B7 192 aaKnown RBP7.58□□□□□ -1.2
VPS41-204ENST00000413141 MRVI1Q9Y6F6 885 aa7.58□□□□□ -1.2
VPS41-204ENST00000413141 PITPNM1O00562 1244 aa7.57□□□□□ -1.2
VPS41-204ENST00000413141 CUTAO60888 179 aa7.57□□□□□ -1.2
VPS41-204ENST00000413141 ZBED4O75132 1171 aa7.57□□□□□ -1.2
VPS41-204ENST00000413141 ITGBL1O95965 494 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms