RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 CCDC93Q567U6 631 aa18.54■□□□□ 0.56
HCG18-233ENST00000412685 POTEDQ86YR6 584 aa18.54■□□□□ 0.56
HCG18-233ENST00000412685 ANKRD20A12PQ8NF67 263 aa18.54■□□□□ 0.56
HCG18-233ENST00000412685 CPLX3Q8WVH0 158 aa18.54■□□□□ 0.56
HCG18-233ENST00000412685 C10orf71Q711Q0 1435 aa18.54■□□□□ 0.56
HCG18-233ENST00000412685 COPB1P53618 953 aaKnown RBP18.53■□□□□ 0.56
HCG18-233ENST00000412685 PPP4R3BQ5MIZ7 849 aa18.53■□□□□ 0.56
HCG18-233ENST00000412685 H7C1D1 291 aa18.53■□□□□ 0.56
HCG18-233ENST00000412685 MFAP3LO75121 409 aa18.53■□□□□ 0.56
HCG18-233ENST00000412685 APBA3O96018 575 aa18.53■□□□□ 0.56
HCG18-233ENST00000412685 FLAD1Q8NFF5 587 aa18.53■□□□□ 0.56
HCG18-233ENST00000412685 ZNF622Q969S3 477 aaKnown RBP eCLIP18.53■□□□□ 0.56
HCG18-233ENST00000412685 VPS16Q9H269 839 aa18.53■□□□□ 0.56
HCG18-233ENST00000412685 DBNDD1Q9H9R9 158 aa18.53■□□□□ 0.56
HCG18-233ENST00000412685 TAB2Q9NYJ8 693 aa18.53■□□□□ 0.56
HCG18-233ENST00000412685 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.53■□□□□ 0.56
HCG18-233ENST00000412685 V9GYY5 206 aaPredicted RBP18.53■□□□□ 0.56
HCG18-233ENST00000412685 MPHOSPH10O00566 681 aaKnown RBP18.52■□□□□ 0.56
HCG18-233ENST00000412685 FANCGO15287 622 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 GYPCP04921 128 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 CRKP46108 304 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 PODNQ7Z5L7 613 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 GIMAP8Q8ND71 665 aaPredicted RBP18.52■□□□□ 0.56
HCG18-233ENST00000412685 DESI2Q9BSY9 194 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 NAA15Q9BXJ9 866 aaKnown RBP18.52■□□□□ 0.56
HCG18-233ENST00000412685 JMJD4Q9H9V9 463 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 KCNQ5Q9NR82 932 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 PNMA6FA0A0J9YX94 578 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 TRIM49BA6NDI0 452 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 CASP14P31944 242 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 STIM1Q13586 685 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 MTF1Q14872 753 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 CNGA4Q8IV77 575 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 ADGRF4Q8IZF3 695 aa18.52■□□□□ 0.56
HCG18-233ENST00000412685 SOWAHDA6NJG2 315 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 IRF2BP1Q8IU81 584 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 CREBRFQ8IUR6 639 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 ZDHHC15Q96MV8 337 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 MTMR9Q96QG7 549 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 MMTAG2Q9BU76 263 aaKnown RBP18.51■□□□□ 0.55
HCG18-233ENST00000412685 TRIM9Q9C026 710 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 EHD4Q9H223 541 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 CGNQ9P2M7 1197 aaKnown RBP18.51■□□□□ 0.55
HCG18-233ENST00000412685 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.51■□□□□ 0.552e-6■■■■□ 23.1
HCG18-233ENST00000412685 PSMA7O14818 248 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 TXKP42681 527 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 FXR1P51114 621 aaKnown RBP eCLIP18.51■□□□□ 0.55
HCG18-233ENST00000412685 PMS1P54277 932 aaKnown RBP18.51■□□□□ 0.55
HCG18-233ENST00000412685 ATP2B2Q01814 1243 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 CALCRLQ16602 461 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 GPATCH4Q5T3I0 446 aaKnown RBP18.51■□□□□ 0.55
HCG18-233ENST00000412685 MSL1Q68DK7 614 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 TTBK2Q6IQ55 1244 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 PPP1R18Q6NYC8 613 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 ZFPM1Q8IX07 1006 aa18.51■□□□□ 0.55
HCG18-233ENST00000412685 PPP1R11O60927 126 aaPredicted RBP18.5■□□□□ 0.55
HCG18-233ENST00000412685 TPM1P09493 284 aa18.5■□□□□ 0.55
HCG18-233ENST00000412685 SLURP2P0DP57 97 aa18.5■□□□□ 0.55
HCG18-233ENST00000412685 CCDC51Q96ER9 411 aa18.5■□□□□ 0.55
HCG18-233ENST00000412685 CCDC175P0C221 793 aa18.5■□□□□ 0.55
HCG18-233ENST00000412685 CCDC96Q2M329 555 aa18.5■□□□□ 0.55
HCG18-233ENST00000412685 KIAA0825Q8IV33 1275 aa18.5■□□□□ 0.55
HCG18-233ENST00000412685 C7orf25Q9BPX7 421 aa18.5■□□□□ 0.55
HCG18-233ENST00000412685 RIC8AQ9NPQ8 531 aa18.5■□□□□ 0.55
HCG18-233ENST00000412685 SLC37A4O43826 429 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 EDIL3O43854 480 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 TDP2O95551 362 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 ELF2Q15723 593 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 RAD9BQ6WBX8 426 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 CCDC47Q96A33 483 aaKnown RBP18.49■□□□□ 0.55
HCG18-233ENST00000412685 CALML4Q96GE6 196 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 CCDC17Q96LX7 622 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 DNAJC18Q9H819 358 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 GREB1LQ9C091 1923 aaPredicted RBP18.49■□□□□ 0.55
HCG18-233ENST00000412685 SLC16A2P36021 539 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 FXR2P51116 673 aaKnown RBP eCLIP18.49■□□□□ 0.55
HCG18-233ENST00000412685 CACNB3P54284 484 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 GNG11P61952 73 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 ASIC1P78348 528 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 C2CD5Q86YS7 1000 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 TRIM47Q96LD4 638 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 EXOC1Q9NV70 894 aa18.49■□□□□ 0.55
HCG18-233ENST00000412685 TNNI2P48788 182 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 AMPD3Q01432 767 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 PDE4DQ08499 809 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 STRIP1Q5VSL9 837 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 TTI2Q6NXR4 508 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 KCTD1Q719H9 257 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 LRRN4CLQ8ND94 238 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 DHTKD1Q96HY7 919 aaPredicted RBP18.48■□□□□ 0.55
HCG18-233ENST00000412685 WDR24Q96S15 920 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 THAP9Q9H5L6 903 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 MRPL44Q9H9J2 332 aaKnown RBP18.48■□□□□ 0.55
HCG18-233ENST00000412685 LRWD1Q9UFC0 647 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 PCDHAC2Q9Y5I4 1007 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 URI1O94763 535 aaPredicted RBP18.48■□□□□ 0.55
HCG18-233ENST00000412685 FECHP22830 423 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 EEF1GP26641 437 aaKnown RBP18.48■□□□□ 0.55
HCG18-233ENST00000412685 UBXN1Q04323 297 aa18.48■□□□□ 0.55
HCG18-233ENST00000412685 TCP10Q12799 353 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms